RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 SIN3AQ96ST3 1273 aa28.78■■■□□ 2.2
ITM2C-210ENST00000620962 TOM1L2Q6ZVM7 507 aa28.77■■■□□ 2.2
ITM2C-210ENST00000620962 WDR17Q8IZU2 1322 aa28.76■■■□□ 2.19
ITM2C-210ENST00000620962 TTC21AQ8NDW8 1320 aa28.76■■■□□ 2.19
ITM2C-210ENST00000620962 KCNH5Q8NCM2 988 aa28.76■■■□□ 2.19
ITM2C-210ENST00000620962 DDB1Q16531 1140 aa28.75■■■□□ 2.19
ITM2C-210ENST00000620962 ARHGEF25Q86VW2 580 aa28.75■■■□□ 2.19
ITM2C-210ENST00000620962 AXIN2Q9Y2T1 843 aa28.75■■■□□ 2.19
ITM2C-210ENST00000620962 RGPD5Q99666 1765 aa28.75■■■□□ 2.19
ITM2C-210ENST00000620962 CDCA7Q9BWT1 371 aaPredicted RBP28.73■■■□□ 2.19
ITM2C-210ENST00000620962 BCL9O00512 1426 aa28.71■■■□□ 2.19
ITM2C-210ENST00000620962 NFAT5O94916 1531 aa28.71■■■□□ 2.19
ITM2C-210ENST00000620962 ABCC6O95255 1503 aa28.71■■■□□ 2.19
ITM2C-210ENST00000620962 PLSCR1O15162 318 aa28.71■■■□□ 2.19
ITM2C-210ENST00000620962 MON2Q7Z3U7 1717 aa28.71■■■□□ 2.19
ITM2C-210ENST00000620962 NEUROD1Q13562 356 aa28.7■■■□□ 2.18
ITM2C-210ENST00000620962 SBNO2Q9Y2G9 1366 aa28.7■■■□□ 2.18
ITM2C-210ENST00000620962 KTN1Q86UP2 1357 aaKnown RBP28.68■■■□□ 2.18
ITM2C-210ENST00000620962 CARD10Q9BWT7 1032 aa28.68■■■□□ 2.18
ITM2C-210ENST00000620962 BCL11BQ9C0K0 894 aaPredicted RBP28.68■■■□□ 2.18
ITM2C-210ENST00000620962 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
ITM2C-210ENST00000620962 MARCH10Q8NA82 808 aaPredicted RBP28.65■■■□□ 2.18
ITM2C-210ENST00000620962 CSB-PGBD3P0DP91 1061 aa28.63■■■□□ 2.17
ITM2C-210ENST00000620962 SPON1Q9HCB6 807 aa28.63■■■□□ 2.17
ITM2C-210ENST00000620962 USP31Q70CQ4 1352 aa28.62■■■□□ 2.17
ITM2C-210ENST00000620962 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
ITM2C-210ENST00000620962 SOX12O15370 315 aa28.62■■■□□ 2.17
ITM2C-210ENST00000620962 KCNQ2O43526 872 aa28.6■■■□□ 2.17
ITM2C-210ENST00000620962 CD163L1Q9NR16 1453 aa28.59■■■□□ 2.17
ITM2C-210ENST00000620962 PTF1AQ7RTS3 328 aa28.59■■■□□ 2.17
ITM2C-210ENST00000620962 CASZ1Q86V15 1759 aa28.58■■■□□ 2.17
ITM2C-210ENST00000620962 EXOC5O00471 708 aa28.57■■■□□ 2.16
ITM2C-210ENST00000620962 TNS2Q63HR2 1409 aa28.57■■■□□ 2.16
ITM2C-210ENST00000620962 LTN1O94822 1766 aa28.56■■■□□ 2.16
ITM2C-210ENST00000620962 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
ITM2C-210ENST00000620962 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
ITM2C-210ENST00000620962 PROM2Q8N271 834 aa28.55■■■□□ 2.16
ITM2C-210ENST00000620962 PPP1R1BQ9UD71 204 aaPredicted RBP28.55■■■□□ 2.16
ITM2C-210ENST00000620962 NINLQ9Y2I6 1382 aa28.54■■■□□ 2.16
ITM2C-210ENST00000620962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.54■■■□□ 2.16
ITM2C-210ENST00000620962 ERBB3P21860 1342 aa28.53■■■□□ 2.16
ITM2C-210ENST00000620962 EDC4Q6P2E9 1401 aaKnown RBP28.52■■■□□ 2.16
ITM2C-210ENST00000620962 NHSQ6T4R5 1651 aa28.51■■■□□ 2.16
ITM2C-210ENST00000620962 HDGFL2Q7Z4V5 671 aaPredicted RBP28.51■■■□□ 2.15
ITM2C-210ENST00000620962 NME9Q86XW9 330 aa28.51■■■□□ 2.15
ITM2C-210ENST00000620962 TXNRD1Q16881 649 aa28.49■■■□□ 2.15
ITM2C-210ENST00000620962 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
ITM2C-210ENST00000620962 TMC1Q8TDI8 760 aa28.48■■■□□ 2.15
ITM2C-210ENST00000620962 SLC12A5Q9H2X9 1139 aa28.47■■■□□ 2.15
ITM2C-210ENST00000620962 NLRP2Q9NX02 1062 aa28.46■■■□□ 2.15
ITM2C-210ENST00000620962 TERF2IPQ9NYB0 399 aa28.46■■■□□ 2.15
ITM2C-210ENST00000620962 A0A1W2PP64 1363 aa28.45■■■□□ 2.14
ITM2C-210ENST00000620962 TONSLQ96HA7 1378 aa28.45■■■□□ 2.14
ITM2C-210ENST00000620962 IL2RBP14784 551 aa28.44■■■□□ 2.14
ITM2C-210ENST00000620962 STK32BQ9NY57 414 aa28.44■■■□□ 2.14
ITM2C-210ENST00000620962 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
ITM2C-210ENST00000620962 SLC15A2Q16348 729 aa28.42■■■□□ 2.14
ITM2C-210ENST00000620962 ANKRD24Q8TF21 1146 aa28.42■■■□□ 2.14
ITM2C-210ENST00000620962 DCAF8L1A6NGE4 600 aa28.41■■■□□ 2.14
ITM2C-210ENST00000620962 YY1P25490 414 aa28.41■■■□□ 2.14
ITM2C-210ENST00000620962 FAM208AQ9UK61 1670 aaKnown RBP28.41■■■□□ 2.14
ITM2C-210ENST00000620962 MYOM1P52179 1685 aa28.39■■■□□ 2.14
ITM2C-210ENST00000620962 BTAF1O14981 1849 aa28.39■■■□□ 2.14
ITM2C-210ENST00000620962 ZBTB7AO95365 584 aa28.39■■■□□ 2.14
ITM2C-210ENST00000620962 PTGER2P43116 358 aa28.39■■■□□ 2.14
ITM2C-210ENST00000620962 ACSBG1Q96GR2 724 aa28.38■■■□□ 2.13
ITM2C-210ENST00000620962 PAPPAQ13219 1627 aa28.38■■■□□ 2.13
ITM2C-210ENST00000620962 IP6K1Q92551 441 aa28.36■■■□□ 2.13
ITM2C-210ENST00000620962 KAT6BQ8WYB5 2073 aa28.35■■■□□ 2.13
ITM2C-210ENST00000620962 TESK2Q96S53 571 aa28.35■■■□□ 2.13
ITM2C-210ENST00000620962 SLC24A1O60721 1099 aa28.34■■■□□ 2.13
ITM2C-210ENST00000620962 MTFR1LQ9H019 292 aa28.33■■■□□ 2.13
ITM2C-210ENST00000620962 ATF5Q9Y2D1 282 aaPredicted RBP28.33■■■□□ 2.13
ITM2C-210ENST00000620962 SGIP1Q9BQI5 828 aa28.3■■■□□ 2.12
ITM2C-210ENST00000620962 ST20-MTHFSA0A0A6YYL1 179 aa28.29■■■□□ 2.12
ITM2C-210ENST00000620962 COG3Q96JB2 828 aa28.29■■■□□ 2.12
ITM2C-210ENST00000620962 MAP3K19Q56UN5 1328 aa28.26■■■□□ 2.11
ITM2C-210ENST00000620962 ANKRD36BQ8N2N9 1353 aa28.25■■■□□ 2.11
ITM2C-210ENST00000620962 QSER1Q2KHR3 1735 aa28.25■■■□□ 2.11
ITM2C-210ENST00000620962 HOXC9P31274 260 aa28.24■■■□□ 2.11
ITM2C-210ENST00000620962 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
ITM2C-210ENST00000620962 SYT17Q9BSW7 474 aa28.24■■■□□ 2.11
ITM2C-210ENST00000620962 FHDC1Q9C0D6 1143 aaPredicted RBP28.24■■■□□ 2.11
ITM2C-210ENST00000620962 LRRC4BQ9NT99 713 aa28.24■■■□□ 2.11
ITM2C-210ENST00000620962 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
ITM2C-210ENST00000620962 DDX54Q8TDD1 881 aaKnown RBP28.23■■■□□ 2.11
ITM2C-210ENST00000620962 SHANK3Q9BYB0 1731 aa28.23■■■□□ 2.11
ITM2C-210ENST00000620962 ZNF827Q17R98 1081 aa28.22■■■□□ 2.11
ITM2C-210ENST00000620962 SLC27A3Q5K4L6 730 aa28.22■■■□□ 2.11
ITM2C-210ENST00000620962 RTL1A6NKG5 1358 aa28.22■■■□□ 2.11
ITM2C-210ENST00000620962 AMPHP49418 695 aa28.21■■■□□ 2.11
ITM2C-210ENST00000620962 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
ITM2C-210ENST00000620962 MAP3K5Q99683 1374 aa28.2■■■□□ 2.1
ITM2C-210ENST00000620962 AKT1S1Q96B36 256 aa28.19■■■□□ 2.1
ITM2C-210ENST00000620962 LY75O60449 1722 aa28.18■■■□□ 2.1
ITM2C-210ENST00000620962 ARXQ96QS3 562 aa28.18■■■□□ 2.1
ITM2C-210ENST00000620962 FBLN1P23142 703 aa28.17■■■□□ 2.1
ITM2C-210ENST00000620962 COL24A1Q17RW2 1714 aa28.17■■■□□ 2.1
ITM2C-210ENST00000620962 MEGF6O75095 1541 aa28.17■■■□□ 2.1
ITM2C-210ENST00000620962 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms