RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 KANK4Q5T7N3 995 aaPredicted RBP11.68□□□□□ -0.54
LPCAT3-213ENST00000620843 TRAIPQ9BWF2 469 aa11.68□□□□□ -0.54
LPCAT3-213ENST00000620843 GIGYF1O75420 1035 aaPredicted RBP11.67□□□□□ -0.54
LPCAT3-213ENST00000620843 RPIAP49247 311 aa11.67□□□□□ -0.54
LPCAT3-213ENST00000620843 WNT7BP56706 349 aa11.67□□□□□ -0.54
LPCAT3-213ENST00000620843 NCOA4Q13772 614 aa11.67□□□□□ -0.54
LPCAT3-213ENST00000620843 ATG7O95352 703 aa11.66□□□□□ -0.54
LPCAT3-213ENST00000620843 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
LPCAT3-213ENST00000620843 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
LPCAT3-213ENST00000620843 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
LPCAT3-213ENST00000620843 CHIC2Q9UKJ5 165 aa11.66□□□□□ -0.54
LPCAT3-213ENST00000620843 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
LPCAT3-213ENST00000620843 VARSP26640 1264 aaKnown RBP11.64□□□□□ -0.55
LPCAT3-213ENST00000620843 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
LPCAT3-213ENST00000620843 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
LPCAT3-213ENST00000620843 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
LPCAT3-213ENST00000620843 MKRN1Q9UHC7 482 aaKnown RBP11.64□□□□□ -0.55
LPCAT3-213ENST00000620843 CD2BP2O95400 341 aaKnown RBP11.63□□□□□ -0.55
LPCAT3-213ENST00000620843 TRAF7Q6Q0C0 670 aa11.63□□□□□ -0.55
LPCAT3-213ENST00000620843 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
LPCAT3-213ENST00000620843 CDV3Q9UKY7 258 aaKnown RBP11.63□□□□□ -0.55
LPCAT3-213ENST00000620843 DOLKQ9UPQ8 538 aa11.63□□□□□ -0.55
LPCAT3-213ENST00000620843 LZTS3O60299 673 aaPredicted RBP11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 PDE4CQ08493 712 aa11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 EML3Q32P44 896 aa11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
LPCAT3-213ENST00000620843 ESPNB1AK53 854 aa11.61□□□□□ -0.55
LPCAT3-213ENST00000620843 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
LPCAT3-213ENST00000620843 RAB15P59190 212 aa11.6□□□□□ -0.55
LPCAT3-213ENST00000620843 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
LPCAT3-213ENST00000620843 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
LPCAT3-213ENST00000620843 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
LPCAT3-213ENST00000620843 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 ATP5J2-PTCD1G3V325 749 aa11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 RASA1P20936 1047 aa11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 VASH1Q7L8A9 365 aaPredicted RBP11.59□□□□□ -0.55
LPCAT3-213ENST00000620843 USP17L15C9J2P7 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L11C9JVI0 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L21D6R901 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L18D6R9N7 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L22D6RA61 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L19D6RCP7 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L20D6RJB6 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 USP17L24Q0WX57 530 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 SEPT12Q8IYM1 358 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 ZMIZ1Q9ULJ6 1067 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 NOVA2Q9UNW9 492 aaKnown RBP11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 MAP4K5Q9Y4K4 846 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
LPCAT3-213ENST00000620843 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
LPCAT3-213ENST00000620843 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
LPCAT3-213ENST00000620843 ARID5BQ14865 1188 aa11.57□□□□□ -0.56
LPCAT3-213ENST00000620843 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
LPCAT3-213ENST00000620843 NOD1Q9Y239 953 aa11.57□□□□□ -0.56
LPCAT3-213ENST00000620843 SLC19A1P41440 591 aa11.56□□□□□ -0.56
LPCAT3-213ENST00000620843 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
LPCAT3-213ENST00000620843 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
LPCAT3-213ENST00000620843 STK32AQ8WU08 396 aa11.56□□□□□ -0.56
LPCAT3-213ENST00000620843 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 PTK7Q13308 1070 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 TLL2Q9Y6L7 1015 aa11.55□□□□□ -0.56
LPCAT3-213ENST00000620843 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
LPCAT3-213ENST00000620843 CLDN10P78369 228 aa11.54□□□□□ -0.56
LPCAT3-213ENST00000620843 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
LPCAT3-213ENST00000620843 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
LPCAT3-213ENST00000620843 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
LPCAT3-213ENST00000620843 CDK15Q96Q40 435 aa11.53□□□□□ -0.56
LPCAT3-213ENST00000620843 DNAAF2Q9NVR5 837 aaKnown RBP11.53□□□□□ -0.56
LPCAT3-213ENST00000620843 PODXL2Q9NZ53 605 aa11.53□□□□□ -0.56
LPCAT3-213ENST00000620843 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
LPCAT3-213ENST00000620843 FSHRP23945 695 aa11.52□□□□□ -0.57
LPCAT3-213ENST00000620843 ATP1A2P50993 1020 aa11.52□□□□□ -0.57
LPCAT3-213ENST00000620843 GTF2IP78347 998 aa11.52□□□□□ -0.57
LPCAT3-213ENST00000620843 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
LPCAT3-213ENST00000620843 WNT7AO00755 349 aa11.51□□□□□ -0.57
LPCAT3-213ENST00000620843 SIAH2O43255 324 aa11.51□□□□□ -0.57
LPCAT3-213ENST00000620843 USP4Q13107 963 aa11.51□□□□□ -0.57
LPCAT3-213ENST00000620843 ANKMY2Q8IV38 441 aa11.51□□□□□ -0.57
LPCAT3-213ENST00000620843 GRM5P41594 1212 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 SIRT1Q96EB6 747 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 KIAA1024Q9UPX6 916 aa11.5□□□□□ -0.57
LPCAT3-213ENST00000620843 A0A0G2JS52 829 aa11.49□□□□□ -0.57
LPCAT3-213ENST00000620843 DPYDQ12882 1025 aa11.49□□□□□ -0.57
LPCAT3-213ENST00000620843 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
LPCAT3-213ENST00000620843 MPNDQ8N594 471 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms