RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
LPCAT3-213ENST00000620843 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
LPCAT3-213ENST00000620843 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
LPCAT3-213ENST00000620843 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
LPCAT3-213ENST00000620843 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
LPCAT3-213ENST00000620843 FOXD1Q16676 465 aa22.42■■□□□ 1.18
LPCAT3-213ENST00000620843 ADRA2BP18089 450 aa22.02■■□□□ 1.12
LPCAT3-213ENST00000620843 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
LPCAT3-213ENST00000620843 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
LPCAT3-213ENST00000620843 KCNA4P22459 653 aa20.8■□□□□ 0.92
LPCAT3-213ENST00000620843 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
LPCAT3-213ENST00000620843 MSH5O43196 834 aa20.44■□□□□ 0.86
LPCAT3-213ENST00000620843 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
LPCAT3-213ENST00000620843 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
LPCAT3-213ENST00000620843 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
LPCAT3-213ENST00000620843 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
LPCAT3-213ENST00000620843 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
LPCAT3-213ENST00000620843 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.77
LPCAT3-213ENST00000620843 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
LPCAT3-213ENST00000620843 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
LPCAT3-213ENST00000620843 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
LPCAT3-213ENST00000620843 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
LPCAT3-213ENST00000620843 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LPCAT3-213ENST00000620843 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
LPCAT3-213ENST00000620843 ZBTB22O15209 634 aa19.16■□□□□ 0.66
LPCAT3-213ENST00000620843 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
LPCAT3-213ENST00000620843 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
LPCAT3-213ENST00000620843 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
LPCAT3-213ENST00000620843 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
LPCAT3-213ENST00000620843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
LPCAT3-213ENST00000620843 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
LPCAT3-213ENST00000620843 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
LPCAT3-213ENST00000620843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
LPCAT3-213ENST00000620843 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
LPCAT3-213ENST00000620843 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
LPCAT3-213ENST00000620843 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
LPCAT3-213ENST00000620843 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
LPCAT3-213ENST00000620843 APLP2Q06481 763 aa17.69■□□□□ 0.42
LPCAT3-213ENST00000620843 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
LPCAT3-213ENST00000620843 FKBP8Q14318 412 aa17.57■□□□□ 0.4
LPCAT3-213ENST00000620843 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
LPCAT3-213ENST00000620843 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
LPCAT3-213ENST00000620843 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
LPCAT3-213ENST00000620843 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
LPCAT3-213ENST00000620843 CAPN15O75808 1086 aa17.35■□□□□ 0.37
LPCAT3-213ENST00000620843 POLA2Q14181 598 aa17.22■□□□□ 0.35
LPCAT3-213ENST00000620843 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
LPCAT3-213ENST00000620843 FBLN2P98095 1184 aa17.12■□□□□ 0.33
LPCAT3-213ENST00000620843 ABCB7O75027 752 aa17.09■□□□□ 0.33
LPCAT3-213ENST00000620843 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
LPCAT3-213ENST00000620843 ZBTB12Q9Y330 459 aaPredicted RBP16.95■□□□□ 0.3
LPCAT3-213ENST00000620843 DSG3P32926 999 aa16.92■□□□□ 0.3
LPCAT3-213ENST00000620843 RTN4Q9NQC3 1192 aaKnown RBP16.91■□□□□ 0.3
LPCAT3-213ENST00000620843 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
LPCAT3-213ENST00000620843 PROM2Q8N271 834 aa16.8■□□□□ 0.28
LPCAT3-213ENST00000620843 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
LPCAT3-213ENST00000620843 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
LPCAT3-213ENST00000620843 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
LPCAT3-213ENST00000620843 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
LPCAT3-213ENST00000620843 SPDYE2BA6NHP3 402 aa16.55■□□□□ 0.24
LPCAT3-213ENST00000620843 SPDYE6P0CI01 402 aa16.55■□□□□ 0.24
LPCAT3-213ENST00000620843 VASPP50552 380 aaPredicted RBP16.55■□□□□ 0.24
LPCAT3-213ENST00000620843 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
LPCAT3-213ENST00000620843 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
LPCAT3-213ENST00000620843 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
LPCAT3-213ENST00000620843 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
LPCAT3-213ENST00000620843 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
LPCAT3-213ENST00000620843 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
LPCAT3-213ENST00000620843 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
LPCAT3-213ENST00000620843 SLC24A1O60721 1099 aa16.12■□□□□ 0.17
LPCAT3-213ENST00000620843 MIER1Q8N108 512 aa16.1■□□□□ 0.17
LPCAT3-213ENST00000620843 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
LPCAT3-213ENST00000620843 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
LPCAT3-213ENST00000620843 PKD2Q13563 968 aa16.02■□□□□ 0.16
LPCAT3-213ENST00000620843 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
LPCAT3-213ENST00000620843 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
LPCAT3-213ENST00000620843 SPDYE1Q8NFV5 336 aaPredicted RBP15.94■□□□□ 0.14
LPCAT3-213ENST00000620843 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
LPCAT3-213ENST00000620843 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
LPCAT3-213ENST00000620843 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
LPCAT3-213ENST00000620843 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
LPCAT3-213ENST00000620843 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
LPCAT3-213ENST00000620843 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
LPCAT3-213ENST00000620843 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
LPCAT3-213ENST00000620843 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
LPCAT3-213ENST00000620843 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
LPCAT3-213ENST00000620843 RGL2O15211 777 aa15.66■□□□□ 0.1
LPCAT3-213ENST00000620843 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
LPCAT3-213ENST00000620843 NUBP1P53384 320 aa15.63■□□□□ 0.09
LPCAT3-213ENST00000620843 MNX1P50219 401 aaPredicted RBP15.6■□□□□ 0.09
LPCAT3-213ENST00000620843 GSE1Q14687 1217 aa15.58■□□□□ 0.08
LPCAT3-213ENST00000620843 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
LPCAT3-213ENST00000620843 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
LPCAT3-213ENST00000620843 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
LPCAT3-213ENST00000620843 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
LPCAT3-213ENST00000620843 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
LPCAT3-213ENST00000620843 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
LPCAT3-213ENST00000620843 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
LPCAT3-213ENST00000620843 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
LPCAT3-213ENST00000620843 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms