RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RGS12O14924 1447 aa25.16■■□□□ 1.62
LITAF-220ENST00000620789 STRN4Q9NRL3 753 aa25.16■■□□□ 1.62
LITAF-220ENST00000620789 EVA1CP58658 441 aa25.14■■□□□ 1.62
LITAF-220ENST00000620789 AXIN2Q9Y2T1 843 aa25.14■■□□□ 1.62
LITAF-220ENST00000620789 SPATA31A5Q5VU36 1347 aa25.12■■□□□ 1.61
LITAF-220ENST00000620789 SPATA31A7Q8IWB4 1347 aa25.12■■□□□ 1.61
LITAF-220ENST00000620789 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
LITAF-220ENST00000620789 RGPD5Q99666 1765 aa25.11■■□□□ 1.61
LITAF-220ENST00000620789 KNSTRNQ9Y448 316 aa25.11■■□□□ 1.61
LITAF-220ENST00000620789 NSD2O96028 1365 aa25.1■■□□□ 1.61
LITAF-220ENST00000620789 LARP1Q6PKG0 1096 aaKnown RBP25.1■■□□□ 1.61
LITAF-220ENST00000620789 SPATA31A1Q5TZJ5 1347 aa25.1■■□□□ 1.61
LITAF-220ENST00000620789 FBLN1P23142 703 aa25.09■■□□□ 1.61
LITAF-220ENST00000620789 MAP3K19Q56UN5 1328 aa25.09■■□□□ 1.61
LITAF-220ENST00000620789 CRB1P82279 1406 aa25.07■■□□□ 1.6
LITAF-220ENST00000620789 WDR17Q8IZU2 1322 aa25.07■■□□□ 1.6
LITAF-220ENST00000620789 BLMP54132 1417 aaPredicted RBP25.06■■□□□ 1.6
LITAF-220ENST00000620789 ONECUT3O60422 494 aaPredicted RBP25.06■■□□□ 1.6
LITAF-220ENST00000620789 RRS1Q15050 365 aaKnown RBP25.06■■□□□ 1.6
LITAF-220ENST00000620789 IP6K1Q92551 441 aa25.06■■□□□ 1.6
LITAF-220ENST00000620789 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
LITAF-220ENST00000620789 PER1O15534 1290 aaPredicted RBP25.05■■□□□ 1.6
LITAF-220ENST00000620789 FAM98CQ17RN3 349 aaKnown RBP25.05■■□□□ 1.6
LITAF-220ENST00000620789 AMPHP49418 695 aa25.04■■□□□ 1.6
LITAF-220ENST00000620789 USP35Q9P2H5 1018 aa25.04■■□□□ 1.6
LITAF-220ENST00000620789 ERBB3P21860 1342 aa25.04■■□□□ 1.6
LITAF-220ENST00000620789 SOCS7O14512 581 aa25.03■■□□□ 1.6
LITAF-220ENST00000620789 CSB-PGBD3P0DP91 1061 aa25.03■■□□□ 1.6
LITAF-220ENST00000620789 HOXC9P31274 260 aa25.03■■□□□ 1.6
LITAF-220ENST00000620789 AMER1Q5JTC6 1135 aaPredicted RBP25.03■■□□□ 1.6
LITAF-220ENST00000620789 TOM1L2Q6ZVM7 507 aa25.03■■□□□ 1.6
LITAF-220ENST00000620789 THSD7AQ9UPZ6 1657 aa25.02■■□□□ 1.6
LITAF-220ENST00000620789 SEPT12Q8IYM1 358 aa25.02■■□□□ 1.6
LITAF-220ENST00000620789 KIF24Q5T7B8 1368 aa25.02■■□□□ 1.6
LITAF-220ENST00000620789 TCP11L2Q8N4U5 519 aa25.01■■□□□ 1.59
LITAF-220ENST00000620789 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
LITAF-220ENST00000620789 PEAK1Q9H792 1746 aa25■■□□□ 1.59
LITAF-220ENST00000620789 BARGINQ6ZT62 677 aa25■■□□□ 1.59
LITAF-220ENST00000620789 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
LITAF-220ENST00000620789 A0A0G2JS52 829 aa24.99■■□□□ 1.59
LITAF-220ENST00000620789 FLT4P35916 1363 aa24.99■■□□□ 1.59
LITAF-220ENST00000620789 MYT1Q01538 1121 aa24.99■■□□□ 1.59
LITAF-220ENST00000620789 BRWD3Q6RI45 1802 aa24.99■■□□□ 1.59
LITAF-220ENST00000620789 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
LITAF-220ENST00000620789 TNNT2P45379 298 aaPredicted RBP24.98■■□□□ 1.59
LITAF-220ENST00000620789 CARD10Q9BWT7 1032 aa24.98■■□□□ 1.59
LITAF-220ENST00000620789 EMILIN1Q9Y6C2 1016 aa24.98■■□□□ 1.59
LITAF-220ENST00000620789 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
LITAF-220ENST00000620789 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
LITAF-220ENST00000620789 NPC1L1Q9UHC9 1359 aa24.96■■□□□ 1.59
LITAF-220ENST00000620789 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.58
LITAF-220ENST00000620789 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
LITAF-220ENST00000620789 INSRP06213 1382 aa24.94■■□□□ 1.58
LITAF-220ENST00000620789 WNK3Q9BYP7 1800 aa24.94■■□□□ 1.58
LITAF-220ENST00000620789 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
LITAF-220ENST00000620789 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
LITAF-220ENST00000620789 HSP90AB2PQ58FF8 381 aa24.93■■□□□ 1.58
LITAF-220ENST00000620789 CC2D1BQ5T0F9 858 aaKnown RBP24.93■■□□□ 1.58
LITAF-220ENST00000620789 PARP4Q9UKK3 1724 aaKnown RBP24.92■■□□□ 1.58
LITAF-220ENST00000620789 SMG6Q86US8 1419 aaKnown RBP24.92■■□□□ 1.58
LITAF-220ENST00000620789 KRT27Q7Z3Y8 459 aa24.91■■□□□ 1.58
LITAF-220ENST00000620789 DISP2A7MBM2 1401 aa24.89■■□□□ 1.58
LITAF-220ENST00000620789 CDCA7Q9BWT1 371 aaPredicted RBP24.89■■□□□ 1.58
LITAF-220ENST00000620789 EP400Q96L91 3159 aa24.89■■□□□ 1.57
LITAF-220ENST00000620789 LRRC37A3O60309 1634 aa24.88■■□□□ 1.57
LITAF-220ENST00000620789 RGPD2P0DJD1 1756 aa24.88■■□□□ 1.57
LITAF-220ENST00000620789 CNGB1Q14028 1251 aaPredicted RBP24.85■■□□□ 1.57
LITAF-220ENST00000620789 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
LITAF-220ENST00000620789 NBPF6Q5VWK0 638 aa24.84■■□□□ 1.57
LITAF-220ENST00000620789 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.57
LITAF-220ENST00000620789 NBPF4Q96M43 638 aa24.84■■□□□ 1.57
LITAF-220ENST00000620789 IL2RBP14784 551 aa24.83■■□□□ 1.57
LITAF-220ENST00000620789 DDB1Q16531 1140 aa24.83■■□□□ 1.57
LITAF-220ENST00000620789 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
LITAF-220ENST00000620789 FAM182BQ5T319 152 aa24.8■■□□□ 1.56
LITAF-220ENST00000620789 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
LITAF-220ENST00000620789 EIF4A2Q14240 407 aaKnown RBP24.79■■□□□ 1.56
LITAF-220ENST00000620789 USHBP1Q8N6Y0 703 aa24.79■■□□□ 1.56
LITAF-220ENST00000620789 EXOC5O00471 708 aa24.78■■□□□ 1.56
LITAF-220ENST00000620789 MTHFSP49914 203 aa24.78■■□□□ 1.56
LITAF-220ENST00000620789 NCAPD2Q15021 1401 aa24.78■■□□□ 1.56
LITAF-220ENST00000620789 EYA1Q99502 592 aa24.76■■□□□ 1.55
LITAF-220ENST00000620789 MEGF6O75095 1541 aa24.76■■□□□ 1.55
LITAF-220ENST00000620789 ZNF316A6NFI3 1004 aaPredicted RBP24.75■■□□□ 1.55
LITAF-220ENST00000620789 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
LITAF-220ENST00000620789 OVOS2A0A0G2JMS6 1433 aa24.74■■□□□ 1.55
LITAF-220ENST00000620789 CCDC125Q86Z20 511 aa24.73■■□□□ 1.55
LITAF-220ENST00000620789 RAPGEF4Q8WZA2 1011 aa24.73■■□□□ 1.55
LITAF-220ENST00000620789 IGSF1Q8N6C5 1336 aa24.72■■□□□ 1.55
LITAF-220ENST00000620789 MARCH10Q8NA82 808 aaPredicted RBP24.72■■□□□ 1.55
LITAF-220ENST00000620789 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
LITAF-220ENST00000620789 TATP17735 454 aaPredicted RBP24.7■■□□□ 1.54
LITAF-220ENST00000620789 PPP2R1AP30153 589 aa24.7■■□□□ 1.54
LITAF-220ENST00000620789 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
LITAF-220ENST00000620789 IL13P35225 146 aa24.69■■□□□ 1.54
LITAF-220ENST00000620789 BCL9O00512 1426 aa24.69■■□□□ 1.54
LITAF-220ENST00000620789 ZCRB1Q8TBF4 217 aaKnown RBP24.68■■□□□ 1.54
LITAF-220ENST00000620789 SHANK3Q9BYB0 1731 aa24.68■■□□□ 1.54
LITAF-220ENST00000620789 COL3A1P02461 1466 aaPredicted RBP24.68■■□□□ 1.54
LITAF-220ENST00000620789 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms