RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 EZH2Q15910 746 aaKnown RBP22.61■■□□□ 1.21
CD40-207ENST00000620709 MON2Q7Z3U7 1717 aa22.6■■□□□ 1.21
CD40-207ENST00000620709 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
CD40-207ENST00000620709 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
CD40-207ENST00000620709 NME9Q86XW9 330 aa22.59■■□□□ 1.21
CD40-207ENST00000620709 COL18A1P39060 1754 aa22.59■■□□□ 1.21
CD40-207ENST00000620709 RGPD5Q99666 1765 aa22.58■■□□□ 1.21
CD40-207ENST00000620709 WDR17Q8IZU2 1322 aa22.57■■□□□ 1.2
CD40-207ENST00000620709 ST20-MTHFSA0A0A6YYL1 179 aa22.57■■□□□ 1.2
CD40-207ENST00000620709 PARP4Q9UKK3 1724 aaKnown RBP22.56■■□□□ 1.2
CD40-207ENST00000620709 R3HDM1Q15032 1099 aaKnown RBP22.56■■□□□ 1.2
CD40-207ENST00000620709 DDB1Q16531 1140 aa22.56■■□□□ 1.2
CD40-207ENST00000620709 TERF2IPQ9NYB0 399 aa22.56■■□□□ 1.2
CD40-207ENST00000620709 CD163L1Q9NR16 1453 aa22.55■■□□□ 1.2
CD40-207ENST00000620709 CAMKK2Q96RR4 588 aa22.54■■□□□ 1.2
CD40-207ENST00000620709 DISP2A7MBM2 1401 aa22.54■■□□□ 1.2
CD40-207ENST00000620709 NFAT5O94916 1531 aa22.54■■□□□ 1.2
CD40-207ENST00000620709 A0A1W2PP64 1363 aa22.51■■□□□ 1.19
CD40-207ENST00000620709 LRRC37A3O60309 1634 aa22.51■■□□□ 1.19
CD40-207ENST00000620709 CARD10Q9BWT7 1032 aa22.51■■□□□ 1.19
CD40-207ENST00000620709 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
CD40-207ENST00000620709 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
CD40-207ENST00000620709 TESK2Q96S53 571 aa22.5■■□□□ 1.19
CD40-207ENST00000620709 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
CD40-207ENST00000620709 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
CD40-207ENST00000620709 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
CD40-207ENST00000620709 WNK3Q9BYP7 1800 aa22.49■■□□□ 1.19
CD40-207ENST00000620709 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
CD40-207ENST00000620709 CDCA7Q9BWT1 371 aaPredicted RBP22.48■■□□□ 1.19
CD40-207ENST00000620709 C11orf95C9JLR9 678 aaPredicted RBP22.47■■□□□ 1.19
CD40-207ENST00000620709 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
CD40-207ENST00000620709 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
CD40-207ENST00000620709 LTN1O94822 1766 aa22.47■■□□□ 1.19
CD40-207ENST00000620709 EXOC5O00471 708 aa22.45■■□□□ 1.18
CD40-207ENST00000620709 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
CD40-207ENST00000620709 MARCH10Q8NA82 808 aaPredicted RBP22.45■■□□□ 1.18
CD40-207ENST00000620709 NBPF14Q5TI25 921 aa22.44■■□□□ 1.18
CD40-207ENST00000620709 USP54Q70EL1 1684 aa22.44■■□□□ 1.18
CD40-207ENST00000620709 PEAK1Q9H792 1746 aa22.44■■□□□ 1.18
CD40-207ENST00000620709 USP47Q96K76 1375 aa22.44■■□□□ 1.18
CD40-207ENST00000620709 CCDC7Q96M83 1385 aa22.44■■□□□ 1.18
CD40-207ENST00000620709 TMF1P82094 1093 aa22.43■■□□□ 1.18
CD40-207ENST00000620709 ANKRD24Q8TF21 1146 aa22.43■■□□□ 1.18
CD40-207ENST00000620709 LRP5O75197 1615 aa22.43■■□□□ 1.18
CD40-207ENST00000620709 NINLQ9Y2I6 1382 aa22.43■■□□□ 1.18
CD40-207ENST00000620709 ABCC6O95255 1503 aa22.42■■□□□ 1.18
CD40-207ENST00000620709 RREB1Q92766 1687 aa22.42■■□□□ 1.18
CD40-207ENST00000620709 SBF2Q86WG5 1849 aa22.42■■□□□ 1.18
CD40-207ENST00000620709 PTF1AQ7RTS3 328 aa22.41■■□□□ 1.18
CD40-207ENST00000620709 LTV1Q96GA3 475 aaPredicted RBP22.41■■□□□ 1.18
CD40-207ENST00000620709 COG3Q96JB2 828 aa22.41■■□□□ 1.18
CD40-207ENST00000620709 NUP188Q5SRE5 1749 aa22.41■■□□□ 1.18
CD40-207ENST00000620709 ERBB3P21860 1342 aa22.41■■□□□ 1.18
CD40-207ENST00000620709 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
CD40-207ENST00000620709 IL2RBP14784 551 aa22.36■■□□□ 1.17
CD40-207ENST00000620709 FBLN1P23142 703 aa22.36■■□□□ 1.17
CD40-207ENST00000620709 TNS2Q63HR2 1409 aa22.36■■□□□ 1.17
CD40-207ENST00000620709 ANKRD36BQ8N2N9 1353 aa22.36■■□□□ 1.17
CD40-207ENST00000620709 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
CD40-207ENST00000620709 IP6K1Q92551 441 aa22.36■■□□□ 1.17
CD40-207ENST00000620709 PLSCR1O15162 318 aa22.35■■□□□ 1.17
CD40-207ENST00000620709 AMPHP49418 695 aa22.35■■□□□ 1.17
CD40-207ENST00000620709 ACSBG1Q96GR2 724 aa22.35■■□□□ 1.17
CD40-207ENST00000620709 GGNBP2Q9H3C7 697 aa22.34■■□□□ 1.17
CD40-207ENST00000620709 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
CD40-207ENST00000620709 MAP3K19Q56UN5 1328 aa22.33■■□□□ 1.16
CD40-207ENST00000620709 KCNQ2O43526 872 aa22.31■■□□□ 1.16
CD40-207ENST00000620709 BCL9O00512 1426 aa22.31■■□□□ 1.16
CD40-207ENST00000620709 HOXC9P31274 260 aa22.31■■□□□ 1.16
CD40-207ENST00000620709 KAT6BQ8WYB5 2073 aa22.3■■□□□ 1.16
CD40-207ENST00000620709 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
CD40-207ENST00000620709 RGPD3A6NKT7 1758 aaPredicted RBP22.29■■□□□ 1.16
CD40-207ENST00000620709 RGPD4Q7Z3J3 1758 aa22.29■■□□□ 1.16
CD40-207ENST00000620709 FYB1O15117 783 aa22.29■■□□□ 1.16
CD40-207ENST00000620709 DDX54Q8TDD1 881 aaKnown RBP22.29■■□□□ 1.16
CD40-207ENST00000620709 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
CD40-207ENST00000620709 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
CD40-207ENST00000620709 PROM2Q8N271 834 aa22.27■■□□□ 1.16
CD40-207ENST00000620709 ANO8Q9HCE9 1232 aaPredicted RBP22.27■■□□□ 1.16
CD40-207ENST00000620709 PPP1R1BQ9UD71 204 aaPredicted RBP22.26■■□□□ 1.15
CD40-207ENST00000620709 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
CD40-207ENST00000620709 SPON1Q9HCB6 807 aa22.25■■□□□ 1.15
CD40-207ENST00000620709 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
CD40-207ENST00000620709 NHSQ6T4R5 1651 aa22.24■■□□□ 1.15
CD40-207ENST00000620709 STK32BQ9NY57 414 aa22.24■■□□□ 1.15
CD40-207ENST00000620709 RGPD2P0DJD1 1756 aa22.24■■□□□ 1.15
CD40-207ENST00000620709 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
CD40-207ENST00000620709 CARD14Q9BXL6 1004 aa22.21■■□□□ 1.15
CD40-207ENST00000620709 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
CD40-207ENST00000620709 SYTL4Q96C24 671 aaPredicted RBP22.21■■□□□ 1.15
CD40-207ENST00000620709 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
CD40-207ENST00000620709 MYOM1P52179 1685 aa22.2■■□□□ 1.14
CD40-207ENST00000620709 PDGFDQ9GZP0 370 aaPredicted RBP22.2■■□□□ 1.14
CD40-207ENST00000620709 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
CD40-207ENST00000620709 BTAF1O14981 1849 aa22.19■■□□□ 1.14
CD40-207ENST00000620709 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
CD40-207ENST00000620709 ZCRB1Q8TBF4 217 aaKnown RBP22.19■■□□□ 1.14
CD40-207ENST00000620709 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
CD40-207ENST00000620709 ZBTB7AO95365 584 aa22.18■■□□□ 1.14
CD40-207ENST00000620709 PPM1GO15355 546 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms