RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 RXRBP28702 533 aa14.9□□□□□ -0.02
TARDBP-223ENST00000620632 RBM6P78332 1123 aaKnown RBP14.9□□□□□ -0.02
TARDBP-223ENST00000620632 VPS72Q15906 364 aa14.9□□□□□ -0.02
TARDBP-223ENST00000620632 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
TARDBP-223ENST00000620632 ABCC6O95255 1503 aa14.9□□□□□ -0.02
TARDBP-223ENST00000620632 STRN4Q9NRL3 753 aa14.89□□□□□ -0.03
TARDBP-223ENST00000620632 CGNL1Q0VF96 1302 aa14.89□□□□□ -0.03
TARDBP-223ENST00000620632 CDK12Q9NYV4 1490 aaPredicted RBP14.89□□□□□ -0.03
TARDBP-223ENST00000620632 RGPD2P0DJD1 1756 aa14.88□□□□□ -0.03
TARDBP-223ENST00000620632 WNK3Q9BYP7 1800 aa14.88□□□□□ -0.03
TARDBP-223ENST00000620632 PER1O15534 1290 aaPredicted RBP14.87□□□□□ -0.03
TARDBP-223ENST00000620632 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
TARDBP-223ENST00000620632 MAP3K19Q56UN5 1328 aa14.87□□□□□ -0.03
TARDBP-223ENST00000620632 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
TARDBP-223ENST00000620632 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
TARDBP-223ENST00000620632 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
TARDBP-223ENST00000620632 RRS1Q15050 365 aaKnown RBP14.86□□□□□ -0.03
TARDBP-223ENST00000620632 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
TARDBP-223ENST00000620632 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
TARDBP-223ENST00000620632 SPATA31A1Q5TZJ5 1347 aa14.85□□□□□ -0.03
TARDBP-223ENST00000620632 NSD2O96028 1365 aa14.84□□□□□ -0.03
TARDBP-223ENST00000620632 CRB1P82279 1406 aa14.83□□□□□ -0.03
TARDBP-223ENST00000620632 EP400Q96L91 3159 aa14.83□□□□□ -0.04
TARDBP-223ENST00000620632 EVA1CP58658 441 aa14.83□□□□□ -0.04
TARDBP-223ENST00000620632 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
TARDBP-223ENST00000620632 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.04
TARDBP-223ENST00000620632 HOXC9P31274 260 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 FAM98CQ17RN3 349 aaKnown RBP14.82□□□□□ -0.04
TARDBP-223ENST00000620632 IP6K1Q92551 441 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 USP35Q9P2H5 1018 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 EMILIN1Q9Y6C2 1016 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 ERBB3P21860 1342 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 WDR17Q8IZU2 1322 aa14.82□□□□□ -0.04
TARDBP-223ENST00000620632 BLMP54132 1417 aaPredicted RBP14.82□□□□□ -0.04
TARDBP-223ENST00000620632 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
TARDBP-223ENST00000620632 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
TARDBP-223ENST00000620632 RTL1A6NKG5 1358 aa14.81□□□□□ -0.04
TARDBP-223ENST00000620632 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
TARDBP-223ENST00000620632 LRRC37A3O60309 1634 aa14.8□□□□□ -0.04
TARDBP-223ENST00000620632 AMPHP49418 695 aa14.79□□□□□ -0.04
TARDBP-223ENST00000620632 SEPT12Q8IYM1 358 aa14.79□□□□□ -0.04
TARDBP-223ENST00000620632 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
TARDBP-223ENST00000620632 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
TARDBP-223ENST00000620632 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
TARDBP-223ENST00000620632 FLT4P35916 1363 aa14.78□□□□□ -0.04
TARDBP-223ENST00000620632 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
TARDBP-223ENST00000620632 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
TARDBP-223ENST00000620632 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
TARDBP-223ENST00000620632 TCP11L2Q8N4U5 519 aa14.78□□□□□ -0.04
TARDBP-223ENST00000620632 LTV1Q96GA3 475 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-223ENST00000620632 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.04
TARDBP-223ENST00000620632 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
TARDBP-223ENST00000620632 BARGINQ6ZT62 677 aa14.77□□□□□ -0.05
TARDBP-223ENST00000620632 MORC1Q86VD1 984 aa14.77□□□□□ -0.05
TARDBP-223ENST00000620632 DISP2A7MBM2 1401 aa14.76□□□□□ -0.05
TARDBP-223ENST00000620632 INSRP06213 1382 aa14.76□□□□□ -0.05
TARDBP-223ENST00000620632 KIF24Q5T7B8 1368 aa14.76□□□□□ -0.05
TARDBP-223ENST00000620632 SOCS7O14512 581 aa14.76□□□□□ -0.05
TARDBP-223ENST00000620632 CNGB1Q14028 1251 aaPredicted RBP14.76□□□□□ -0.05
TARDBP-223ENST00000620632 CARD10Q9BWT7 1032 aa14.76□□□□□ -0.05
TARDBP-223ENST00000620632 PPM1GO15355 546 aaPredicted RBP14.75□□□□□ -0.05
TARDBP-223ENST00000620632 THRAP3Q9Y2W1 955 aaKnown RBP14.75□□□□□ -0.05
TARDBP-223ENST00000620632 SHANK3Q9BYB0 1731 aa14.75□□□□□ -0.05
TARDBP-223ENST00000620632 A0A0G2JS52 829 aa14.74□□□□□ -0.05
TARDBP-223ENST00000620632 MYT1Q01538 1121 aa14.74□□□□□ -0.05
TARDBP-223ENST00000620632 NLRP2Q9NX02 1062 aa14.74□□□□□ -0.05
TARDBP-223ENST00000620632 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
TARDBP-223ENST00000620632 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
TARDBP-223ENST00000620632 NBPF6Q5VWK0 638 aa14.72□□□□□ -0.05
TARDBP-223ENST00000620632 NBPF4Q96M43 638 aa14.72□□□□□ -0.05
TARDBP-223ENST00000620632 RGPD1P0DJD0 1748 aa14.72□□□□□ -0.05
TARDBP-223ENST00000620632 KRT27Q7Z3Y8 459 aa14.71□□□□□ -0.05
TARDBP-223ENST00000620632 USHBP1Q8N6Y0 703 aa14.71□□□□□ -0.05
TARDBP-223ENST00000620632 NCAPD2Q15021 1401 aa14.71□□□□□ -0.05
TARDBP-223ENST00000620632 MEGF6O75095 1541 aa14.71□□□□□ -0.06
TARDBP-223ENST00000620632 SBF2Q86WG5 1849 aa14.71□□□□□ -0.06
TARDBP-223ENST00000620632 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
TARDBP-223ENST00000620632 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.062e-11■■■□□ 15.1
TARDBP-223ENST00000620632 COL3A1P02461 1466 aaPredicted RBP14.69□□□□□ -0.06
TARDBP-223ENST00000620632 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
TARDBP-223ENST00000620632 MTHFSP49914 203 aa14.68□□□□□ -0.06
TARDBP-223ENST00000620632 TNS1Q9HBL0 1735 aaKnown RBP14.68□□□□□ -0.06
TARDBP-223ENST00000620632 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
TARDBP-223ENST00000620632 ZNF316A6NFI3 1004 aaPredicted RBP14.67□□□□□ -0.06
TARDBP-223ENST00000620632 IL2RBP14784 551 aa14.67□□□□□ -0.06
TARDBP-223ENST00000620632 EYA1Q99502 592 aa14.67□□□□□ -0.06
TARDBP-223ENST00000620632 PARD3Q8TEW0 1356 aa14.67□□□□□ -0.06
TARDBP-223ENST00000620632 DDB1Q16531 1140 aa14.66□□□□□ -0.06
TARDBP-223ENST00000620632 OVOS2A0A0G2JMS6 1433 aa14.66□□□□□ -0.06
TARDBP-223ENST00000620632 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
TARDBP-223ENST00000620632 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
TARDBP-223ENST00000620632 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
TARDBP-223ENST00000620632 IL13P35225 146 aa14.64□□□□□ -0.07
TARDBP-223ENST00000620632 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
TARDBP-223ENST00000620632 MARCH10Q8NA82 808 aaPredicted RBP14.64□□□□□ -0.07
TARDBP-223ENST00000620632 EXOC5O00471 708 aa14.62□□□□□ -0.07
TARDBP-223ENST00000620632 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
TARDBP-223ENST00000620632 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
TARDBP-223ENST00000620632 AEBP1Q8IUX7 1158 aa14.61□□□□□ -0.07
TARDBP-223ENST00000620632 NHSQ6T4R5 1651 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 557.1 ms