RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 MAP3K19Q56UN5 1328 aa18.09■□□□□ 0.49
GRIA3-208ENST00000620581 IGSF1Q8N6C5 1336 aa18.09■□□□□ 0.49
GRIA3-208ENST00000620581 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
GRIA3-208ENST00000620581 DISP2A7MBM2 1401 aa18.08■□□□□ 0.48
GRIA3-208ENST00000620581 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
GRIA3-208ENST00000620581 HOXC9P31274 260 aa18.07■□□□□ 0.48
GRIA3-208ENST00000620581 IL13P35225 146 aa18.07■□□□□ 0.48
GRIA3-208ENST00000620581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
GRIA3-208ENST00000620581 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
GRIA3-208ENST00000620581 ZNF831Q5JPB2 1677 aa18.07■□□□□ 0.48
GRIA3-208ENST00000620581 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
GRIA3-208ENST00000620581 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
GRIA3-208ENST00000620581 DLG5Q8TDM6 1919 aa18.05■□□□□ 0.48
GRIA3-208ENST00000620581 BCL9O00512 1426 aa18.04■□□□□ 0.48
GRIA3-208ENST00000620581 MRC1P22897 1456 aa18.04■□□□□ 0.48
GRIA3-208ENST00000620581 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
GRIA3-208ENST00000620581 ATRNO75882 1429 aa18.04■□□□□ 0.48
GRIA3-208ENST00000620581 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
GRIA3-208ENST00000620581 CRB1P82279 1406 aa18.03■□□□□ 0.48
GRIA3-208ENST00000620581 MTHFSP49914 203 aa18.03■□□□□ 0.48
GRIA3-208ENST00000620581 KIAA0232Q92628 1395 aa18.02■□□□□ 0.48
GRIA3-208ENST00000620581 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
GRIA3-208ENST00000620581 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
GRIA3-208ENST00000620581 ZRANB1Q9UGI0 708 aa18.01■□□□□ 0.47
GRIA3-208ENST00000620581 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
GRIA3-208ENST00000620581 ERBB3P21860 1342 aa18.01■□□□□ 0.47
GRIA3-208ENST00000620581 MIER1Q8N108 512 aa18.01■□□□□ 0.47
GRIA3-208ENST00000620581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
GRIA3-208ENST00000620581 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
GRIA3-208ENST00000620581 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
GRIA3-208ENST00000620581 FCHSD2O94868 740 aa18■□□□□ 0.47
GRIA3-208ENST00000620581 RGPD3A6NKT7 1758 aaPredicted RBP18■□□□□ 0.47
GRIA3-208ENST00000620581 RGPD4Q7Z3J3 1758 aa18■□□□□ 0.47
GRIA3-208ENST00000620581 CCDC27Q2M243 656 aa18■□□□□ 0.47
GRIA3-208ENST00000620581 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
GRIA3-208ENST00000620581 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
GRIA3-208ENST00000620581 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
GRIA3-208ENST00000620581 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
GRIA3-208ENST00000620581 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
GRIA3-208ENST00000620581 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
GRIA3-208ENST00000620581 GLI3P10071 1580 aa17.97■□□□□ 0.47
GRIA3-208ENST00000620581 CARD10Q9BWT7 1032 aa17.96■□□□□ 0.47
GRIA3-208ENST00000620581 PLEKHF1Q96S99 279 aa17.96■□□□□ 0.47
GRIA3-208ENST00000620581 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
GRIA3-208ENST00000620581 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
GRIA3-208ENST00000620581 HSPA1LP34931 641 aa17.95■□□□□ 0.46
GRIA3-208ENST00000620581 DDX17Q92841 729 aaKnown RBP17.95■□□□□ 0.46
GRIA3-208ENST00000620581 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
GRIA3-208ENST00000620581 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
GRIA3-208ENST00000620581 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
GRIA3-208ENST00000620581 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
GRIA3-208ENST00000620581 MRS2Q9HD23 443 aa17.93■□□□□ 0.46
GRIA3-208ENST00000620581 AMPHP49418 695 aa17.93■□□□□ 0.46
GRIA3-208ENST00000620581 NHSQ6T4R5 1651 aa17.92■□□□□ 0.46
GRIA3-208ENST00000620581 VPS72Q15906 364 aa17.91■□□□□ 0.46
GRIA3-208ENST00000620581 XPCQ01831 940 aaPredicted RBP17.91■□□□□ 0.46
GRIA3-208ENST00000620581 RUNDC1Q96C34 613 aa17.91■□□□□ 0.46
GRIA3-208ENST00000620581 IL16Q14005 1332 aa17.9■□□□□ 0.46
GRIA3-208ENST00000620581 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
GRIA3-208ENST00000620581 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
GRIA3-208ENST00000620581 RRS1Q15050 365 aaKnown RBP17.89■□□□□ 0.45
GRIA3-208ENST00000620581 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
GRIA3-208ENST00000620581 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
GRIA3-208ENST00000620581 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
GRIA3-208ENST00000620581 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
GRIA3-208ENST00000620581 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
GRIA3-208ENST00000620581 PIP4K2BP78356 416 aa17.88■□□□□ 0.45
GRIA3-208ENST00000620581 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
GRIA3-208ENST00000620581 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
GRIA3-208ENST00000620581 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
GRIA3-208ENST00000620581 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
GRIA3-208ENST00000620581 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
GRIA3-208ENST00000620581 LAMB4A4D0S4 1761 aa17.87■□□□□ 0.45
GRIA3-208ENST00000620581 MEGF6O75095 1541 aa17.87■□□□□ 0.45
GRIA3-208ENST00000620581 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
GRIA3-208ENST00000620581 SBF2Q86WG5 1849 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 SPATA31A1Q5TZJ5 1347 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 RREB1Q92766 1687 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 EYA1Q99502 592 aa17.86■□□□□ 0.45
GRIA3-208ENST00000620581 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
GRIA3-208ENST00000620581 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
GRIA3-208ENST00000620581 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
GRIA3-208ENST00000620581 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
GRIA3-208ENST00000620581 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
GRIA3-208ENST00000620581 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
GRIA3-208ENST00000620581 ITGB4P16144 1822 aa17.84■□□□□ 0.45
GRIA3-208ENST00000620581 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
GRIA3-208ENST00000620581 N4BP2Q86UW6 1770 aaPredicted RBP17.82■□□□□ 0.44
GRIA3-208ENST00000620581 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
GRIA3-208ENST00000620581 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
GRIA3-208ENST00000620581 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
GRIA3-208ENST00000620581 NFE2L2Q16236 605 aa17.81■□□□□ 0.44
GRIA3-208ENST00000620581 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
GRIA3-208ENST00000620581 WDR63Q8IWG1 891 aa17.81■□□□□ 0.44
GRIA3-208ENST00000620581 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
GRIA3-208ENST00000620581 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
GRIA3-208ENST00000620581 MAP3K5Q99683 1374 aa17.8■□□□□ 0.44
GRIA3-208ENST00000620581 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms