RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 BAG6P46379 1132 aa24.14■■□□□ 1.45
HMGN3-203ENST00000620514 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
HMGN3-203ENST00000620514 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
HMGN3-203ENST00000620514 USP54Q70EL1 1684 aa24.14■■□□□ 1.45
HMGN3-203ENST00000620514 RGPD5Q99666 1765 aa24.14■■□□□ 1.45
HMGN3-203ENST00000620514 WDR17Q8IZU2 1322 aa24.13■■□□□ 1.45
HMGN3-203ENST00000620514 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
HMGN3-203ENST00000620514 FAM196AQ6ZSG2 479 aa24.13■■□□□ 1.45
HMGN3-203ENST00000620514 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
HMGN3-203ENST00000620514 PARP4Q9UKK3 1724 aaKnown RBP24.11■■□□□ 1.45
HMGN3-203ENST00000620514 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
HMGN3-203ENST00000620514 TRIM37O94972 964 aa24.11■■□□□ 1.45
HMGN3-203ENST00000620514 EN1Q05925 392 aaPredicted RBP24.11■■□□□ 1.45
HMGN3-203ENST00000620514 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
HMGN3-203ENST00000620514 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
HMGN3-203ENST00000620514 CSB-PGBD3P0DP91 1061 aa24.09■■□□□ 1.45
HMGN3-203ENST00000620514 TMF1P82094 1093 aa24.09■■□□□ 1.45
HMGN3-203ENST00000620514 OVOS2A0A0J9YW53 1432 aa24.08■■□□□ 1.44
HMGN3-203ENST00000620514 OVOS2Q6IE36 1432 aa24.08■■□□□ 1.44
HMGN3-203ENST00000620514 ABCC6O95255 1503 aa24.06■■□□□ 1.44
HMGN3-203ENST00000620514 CARD10Q9BWT7 1032 aa24.06■■□□□ 1.44
HMGN3-203ENST00000620514 DISP2A7MBM2 1401 aa24.06■■□□□ 1.44
HMGN3-203ENST00000620514 LRRC37A3O60309 1634 aa24.06■■□□□ 1.44
HMGN3-203ENST00000620514 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
HMGN3-203ENST00000620514 LTN1O94822 1766 aa24.04■■□□□ 1.44
HMGN3-203ENST00000620514 WNK3Q9BYP7 1800 aa24.04■■□□□ 1.44
HMGN3-203ENST00000620514 APBA3O96018 575 aa24.03■■□□□ 1.44
HMGN3-203ENST00000620514 EZH2Q15910 746 aaKnown RBP24.03■■□□□ 1.44
HMGN3-203ENST00000620514 DDB1Q16531 1140 aa24.03■■□□□ 1.44
HMGN3-203ENST00000620514 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
HMGN3-203ENST00000620514 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
HMGN3-203ENST00000620514 ERBB3P21860 1342 aa24.01■■□□□ 1.43
HMGN3-203ENST00000620514 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
HMGN3-203ENST00000620514 PEAK1Q9H792 1746 aa24■■□□□ 1.43
HMGN3-203ENST00000620514 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
HMGN3-203ENST00000620514 COG3Q96JB2 828 aa23.99■■□□□ 1.43
HMGN3-203ENST00000620514 CDCA7Q9BWT1 371 aaPredicted RBP23.99■■□□□ 1.43
HMGN3-203ENST00000620514 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
HMGN3-203ENST00000620514 FBLN1P23142 703 aa23.98■■□□□ 1.43
HMGN3-203ENST00000620514 CDCA8Q53HL2 280 aa23.98■■□□□ 1.43
HMGN3-203ENST00000620514 MARCH10Q8NA82 808 aaPredicted RBP23.98■■□□□ 1.43
HMGN3-203ENST00000620514 ANKRD24Q8TF21 1146 aa23.98■■□□□ 1.43
HMGN3-203ENST00000620514 NLRP2Q9NX02 1062 aa23.98■■□□□ 1.43
HMGN3-203ENST00000620514 FYB1O15117 783 aa23.95■■□□□ 1.42
HMGN3-203ENST00000620514 IP6K1Q92551 441 aa23.95■■□□□ 1.42
HMGN3-203ENST00000620514 GGNBP2Q9H3C7 697 aa23.95■■□□□ 1.42
HMGN3-203ENST00000620514 MAP3K19Q56UN5 1328 aa23.94■■□□□ 1.42
HMGN3-203ENST00000620514 MYOM1P52179 1685 aa23.94■■□□□ 1.42
HMGN3-203ENST00000620514 C11orf95C9JLR9 678 aaPredicted RBP23.93■■□□□ 1.42
HMGN3-203ENST00000620514 EXOC5O00471 708 aa23.93■■□□□ 1.42
HMGN3-203ENST00000620514 PTF1AQ7RTS3 328 aa23.93■■□□□ 1.42
HMGN3-203ENST00000620514 LTV1Q96GA3 475 aaPredicted RBP23.93■■□□□ 1.42
HMGN3-203ENST00000620514 PARD3Q8TEW0 1356 aa23.92■■□□□ 1.42
HMGN3-203ENST00000620514 SBF2Q86WG5 1849 aa23.92■■□□□ 1.42
HMGN3-203ENST00000620514 R3HDM1Q15032 1099 aaKnown RBP23.92■■□□□ 1.42
HMGN3-203ENST00000620514 SRCAPQ6ZRS2 3230 aa23.92■■□□□ 1.42
HMGN3-203ENST00000620514 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
HMGN3-203ENST00000620514 RREB1Q92766 1687 aa23.9■■□□□ 1.42
HMGN3-203ENST00000620514 HOXC9P31274 260 aa23.9■■□□□ 1.42
HMGN3-203ENST00000620514 TNS2Q63HR2 1409 aa23.9■■□□□ 1.42
HMGN3-203ENST00000620514 IL2RBP14784 551 aa23.89■■□□□ 1.41
HMGN3-203ENST00000620514 AMPHP49418 695 aa23.89■■□□□ 1.41
HMGN3-203ENST00000620514 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.41
HMGN3-203ENST00000620514 BCL9O00512 1426 aa23.88■■□□□ 1.41
HMGN3-203ENST00000620514 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
HMGN3-203ENST00000620514 NSD3Q9BZ95 1437 aa23.87■■□□□ 1.41
HMGN3-203ENST00000620514 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
HMGN3-203ENST00000620514 BCL11BQ9C0K0 894 aaPredicted RBP23.87■■□□□ 1.41
HMGN3-203ENST00000620514 KIF20BQ96Q89 1820 aa23.87■■□□□ 1.41
HMGN3-203ENST00000620514 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
HMGN3-203ENST00000620514 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
HMGN3-203ENST00000620514 FAM208AQ9UK61 1670 aaKnown RBP23.83■■□□□ 1.41
HMGN3-203ENST00000620514 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
HMGN3-203ENST00000620514 PLSCR1O15162 318 aa23.82■■□□□ 1.4
HMGN3-203ENST00000620514 KCNQ2O43526 872 aa23.82■■□□□ 1.4
HMGN3-203ENST00000620514 LRP5O75197 1615 aa23.81■■□□□ 1.4
HMGN3-203ENST00000620514 RGPD2P0DJD1 1756 aa23.81■■□□□ 1.4
HMGN3-203ENST00000620514 ACSBG1Q96GR2 724 aa23.81■■□□□ 1.4
HMGN3-203ENST00000620514 NBPF14Q5TI25 921 aa23.8■■□□□ 1.4
HMGN3-203ENST00000620514 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
HMGN3-203ENST00000620514 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
HMGN3-203ENST00000620514 HSP90AB2PQ58FF8 381 aa23.78■■□□□ 1.4
HMGN3-203ENST00000620514 PROM2Q8N271 834 aa23.78■■□□□ 1.4
HMGN3-203ENST00000620514 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
HMGN3-203ENST00000620514 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
HMGN3-203ENST00000620514 NHSQ6T4R5 1651 aa23.76■■□□□ 1.39
HMGN3-203ENST00000620514 USHBP1Q8N6Y0 703 aa23.76■■□□□ 1.39
HMGN3-203ENST00000620514 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
HMGN3-203ENST00000620514 EMILIN1Q9Y6C2 1016 aa23.76■■□□□ 1.39
HMGN3-203ENST00000620514 ANO8Q9HCE9 1232 aaPredicted RBP23.75■■□□□ 1.39
HMGN3-203ENST00000620514 FLT4P35916 1363 aa23.75■■□□□ 1.39
HMGN3-203ENST00000620514 MEGF6O75095 1541 aa23.74■■□□□ 1.39
HMGN3-203ENST00000620514 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
HMGN3-203ENST00000620514 INSRP06213 1382 aa23.74■■□□□ 1.39
HMGN3-203ENST00000620514 SMG6Q86US8 1419 aaKnown RBP23.73■■□□□ 1.39
HMGN3-203ENST00000620514 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
HMGN3-203ENST00000620514 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
HMGN3-203ENST00000620514 ZCRB1Q8TBF4 217 aaKnown RBP23.7■■□□□ 1.38
HMGN3-203ENST00000620514 PANK3Q9H999 370 aa23.7■■□□□ 1.38
HMGN3-203ENST00000620514 SHANK3Q9BYB0 1731 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms