RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 SEPT12Q8IYM1 358 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 MPNDQ8N594 471 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 CDK15Q96Q40 435 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 KCTD15Q96SI1 283 aaPredicted RBP6.81□□□□□ -1.32
MALAT1-216ENST00000620465 ESPNB1AK53 854 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 SIAH2O43255 324 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 ATP9BO43861 1147 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 SKIP12755 728 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 FSHRP23945 695 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 ARID5BQ14865 1188 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 TBC1D9Q6ZT07 1266 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 PKD2L1Q9P0L9 805 aa6.8□□□□□ -1.32
MALAT1-216ENST00000620465 TFIP11Q9UBB9 837 aaKnown RBP6.8□□□□□ -1.32
MALAT1-216ENST00000620465 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
MALAT1-216ENST00000620465 USP17L5A8MUK1 530 aa6.79□□□□□ -1.32
MALAT1-216ENST00000620465 GIGYF1O75420 1035 aaPredicted RBP6.79□□□□□ -1.32
MALAT1-216ENST00000620465 ADH1CP00326 375 aa6.79□□□□□ -1.32
MALAT1-216ENST00000620465 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
MALAT1-216ENST00000620465 CFAP70Q5T0N1 1121 aa6.79□□□□□ -1.32
MALAT1-216ENST00000620465 PHTF2Q8N3S3 785 aa6.79□□□□□ -1.32
MALAT1-216ENST00000620465 PLPP7Q8NBV4 271 aa6.79□□□□□ -1.32
MALAT1-216ENST00000620465 RAB15P59190 212 aa6.78□□□□□ -1.32
MALAT1-216ENST00000620465 MAP7D1Q3KQU3 841 aa6.78□□□□□ -1.32
MALAT1-216ENST00000620465 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
MALAT1-216ENST00000620465 DOLKQ9UPQ8 538 aa6.78□□□□□ -1.32
MALAT1-216ENST00000620465 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 TNFRSF10AO00220 468 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 GDF9O60383 454 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 ALDH1A1P00352 501 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PRR20EP86478 221 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PRR20CP86479 221 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PRR20DP86480 221 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PRR20BP86481 221 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PRR20AP86496 221 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 DHX9Q08211 1270 aaKnown RBP6.77□□□□□ -1.33
MALAT1-216ENST00000620465 NR5A1Q13285 461 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 PLEKHM2Q8IWE5 1019 aa6.77□□□□□ -1.33
MALAT1-216ENST00000620465 SNIP1Q8TAD8 396 aaKnown RBP6.77□□□□□ -1.33
MALAT1-216ENST00000620465 TTC24A2A3L6 582 aaPredicted RBP6.76□□□□□ -1.33
MALAT1-216ENST00000620465 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
MALAT1-216ENST00000620465 RFX1P22670 979 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 GRM5P41594 1212 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 CYP4X1Q8N118 509 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 PBXIP1Q96AQ6 731 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 CCDC85AQ96PX6 553 aaPredicted RBP6.76□□□□□ -1.33
MALAT1-216ENST00000620465 PCDHB11Q9Y5F2 797 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 WASF2Q9Y6W5 498 aa6.76□□□□□ -1.33
MALAT1-216ENST00000620465 NCOA4Q13772 614 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 EML3Q32P44 896 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 TRAF7Q6Q0C0 670 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 DEPDC4Q8N2C3 294 aa6.75□□□□□ -1.33
MALAT1-216ENST00000620465 ERVH48-1M5A8F1 160 aa6.74□□□□□ -1.33
MALAT1-216ENST00000620465 PPP1R15AO75807 674 aaPredicted RBP6.74□□□□□ -1.33
MALAT1-216ENST00000620465 TRIM67Q6ZTA4 783 aa6.74□□□□□ -1.33
MALAT1-216ENST00000620465 TOR4AQ9NXH8 423 aa6.74□□□□□ -1.33
MALAT1-216ENST00000620465 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.73□□□□□ -1.33
MALAT1-216ENST00000620465 NR3C2P08235 984 aa6.73□□□□□ -1.33
MALAT1-216ENST00000620465 NNTQ13423 1086 aa6.73□□□□□ -1.33
MALAT1-216ENST00000620465 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
MALAT1-216ENST00000620465 ATP5J2-PTCD1G3V325 749 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 J3QL48 77 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 MYCP01106 439 aaPredicted RBP6.72□□□□□ -1.33
MALAT1-216ENST00000620465 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 PPP1R26Q5T8A7 1209 aaPredicted RBP6.72□□□□□ -1.33
MALAT1-216ENST00000620465 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 EMILIN1Q9Y6C2 1016 aa6.72□□□□□ -1.33
MALAT1-216ENST00000620465 ERVK-9P63128 1117 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 SRPK2P78362 688 aaKnown RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 USP4Q13107 963 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 KANK4Q5T7N3 995 aaPredicted RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 TRIM50Q86XT4 487 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 ARXQ96QS3 562 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 ESF1Q9H501 851 aaKnown RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 MKRN1Q9UHC7 482 aaKnown RBP6.71□□□□□ -1.34
MALAT1-216ENST00000620465 NOD1Q9Y239 953 aa6.71□□□□□ -1.34
MALAT1-216ENST00000620465 SMPD1P17405 629 aa6.7□□□□□ -1.34
MALAT1-216ENST00000620465 ATP1A2P50993 1020 aa6.7□□□□□ -1.34
MALAT1-216ENST00000620465 MYT1Q01538 1121 aa6.7□□□□□ -1.34
MALAT1-216ENST00000620465 CC2D2BQ6DHV5 1058 aa6.7□□□□□ -1.34
MALAT1-216ENST00000620465 CYLDQ9NQC7 956 aa6.7□□□□□ -1.34
MALAT1-216ENST00000620465 FAM196BA6NMK8 535 aa6.69□□□□□ -1.34
MALAT1-216ENST00000620465 SCTRP47872 440 aa6.69□□□□□ -1.34
MALAT1-216ENST00000620465 HOMEZQ8IX15 550 aa6.69□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms