RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
SYN3-213ENST00000619146 BTAF1O14981 1849 aa13.07□□□□□ -0.32
SYN3-213ENST00000619146 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 CRB1P82279 1406 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 GCP02774 474 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 LTN1O94822 1766 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 USP19O94966 1318 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 CPDO75976 1380 aa13.06□□□□□ -0.32
SYN3-213ENST00000619146 SOX12O15370 315 aa13.05□□□□□ -0.32
SYN3-213ENST00000619146 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
SYN3-213ENST00000619146 DDB1Q16531 1140 aa13.05□□□□□ -0.32
SYN3-213ENST00000619146 TOM1L2Q6ZVM7 507 aa13.05□□□□□ -0.32
SYN3-213ENST00000619146 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
SYN3-213ENST00000619146 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
SYN3-213ENST00000619146 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
SYN3-213ENST00000619146 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
SYN3-213ENST00000619146 PROM2Q8N271 834 aa13.04□□□□□ -0.32
SYN3-213ENST00000619146 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
SYN3-213ENST00000619146 NHSQ6T4R5 1651 aa13.03□□□□□ -0.32
SYN3-213ENST00000619146 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
SYN3-213ENST00000619146 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
SYN3-213ENST00000619146 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
SYN3-213ENST00000619146 GOLGB1Q14789 3259 aaKnown RBP13.03□□□□□ -0.32
SYN3-213ENST00000619146 PTGER2P43116 358 aa13.02□□□□□ -0.33
SYN3-213ENST00000619146 NLRP6P59044 892 aa13.02□□□□□ -0.33
SYN3-213ENST00000619146 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
SYN3-213ENST00000619146 SLIT3O75094 1523 aa13.02□□□□□ -0.33
SYN3-213ENST00000619146 PLSCR1O15162 318 aa13.01□□□□□ -0.33
SYN3-213ENST00000619146 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
SYN3-213ENST00000619146 TXNRD1Q16881 649 aa13□□□□□ -0.33
SYN3-213ENST00000619146 KLHL34Q8N239 644 aa13□□□□□ -0.33
SYN3-213ENST00000619146 SYT17Q9BSW7 474 aa13□□□□□ -0.33
SYN3-213ENST00000619146 STK32BQ9NY57 414 aa13□□□□□ -0.33
SYN3-213ENST00000619146 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
SYN3-213ENST00000619146 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
SYN3-213ENST00000619146 ACSBG1Q96GR2 724 aa12.99□□□□□ -0.33
SYN3-213ENST00000619146 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
SYN3-213ENST00000619146 CEP350Q5VT06 3117 aa12.99□□□□□ -0.33
SYN3-213ENST00000619146 USP6P35125 1406 aa12.98□□□□□ -0.33
SYN3-213ENST00000619146 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
SYN3-213ENST00000619146 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
SYN3-213ENST00000619146 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
SYN3-213ENST00000619146 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
SYN3-213ENST00000619146 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
SYN3-213ENST00000619146 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.33
SYN3-213ENST00000619146 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
SYN3-213ENST00000619146 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.34
SYN3-213ENST00000619146 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
SYN3-213ENST00000619146 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
SYN3-213ENST00000619146 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
SYN3-213ENST00000619146 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
SYN3-213ENST00000619146 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
SYN3-213ENST00000619146 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
SYN3-213ENST00000619146 EXOC5O00471 708 aa12.93□□□□□ -0.34
SYN3-213ENST00000619146 ARXQ96QS3 562 aa12.93□□□□□ -0.34
SYN3-213ENST00000619146 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
SYN3-213ENST00000619146 NFAT5O94916 1531 aa12.93□□□□□ -0.34
SYN3-213ENST00000619146 GPR162Q16538 588 aa12.92□□□□□ -0.34
SYN3-213ENST00000619146 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
SYN3-213ENST00000619146 COL24A1Q17RW2 1714 aa12.92□□□□□ -0.34
SYN3-213ENST00000619146 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
SYN3-213ENST00000619146 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
SYN3-213ENST00000619146 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
SYN3-213ENST00000619146 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
SYN3-213ENST00000619146 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
SYN3-213ENST00000619146 KCNQ4P56696 695 aa12.9□□□□□ -0.34
SYN3-213ENST00000619146 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
SYN3-213ENST00000619146 LY75O60449 1722 aa12.9□□□□□ -0.34
SYN3-213ENST00000619146 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
SYN3-213ENST00000619146 ABCC6O95255 1503 aa12.89□□□□□ -0.35
SYN3-213ENST00000619146 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYN3-213ENST00000619146 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
SYN3-213ENST00000619146 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
SYN3-213ENST00000619146 BCL9O00512 1426 aa12.88□□□□□ -0.35
SYN3-213ENST00000619146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
SYN3-213ENST00000619146 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
SYN3-213ENST00000619146 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
SYN3-213ENST00000619146 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
SYN3-213ENST00000619146 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
SYN3-213ENST00000619146 KCNH5Q8NCM2 988 aa12.87□□□□□ -0.35
SYN3-213ENST00000619146 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
SYN3-213ENST00000619146 TAF1LQ8IZX4 1826 aa12.87□□□□□ -0.35
SYN3-213ENST00000619146 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
SYN3-213ENST00000619146 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
SYN3-213ENST00000619146 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
SYN3-213ENST00000619146 USP47Q96K76 1375 aa12.85□□□□□ -0.35
SYN3-213ENST00000619146 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
SYN3-213ENST00000619146 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
SYN3-213ENST00000619146 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
SYN3-213ENST00000619146 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
SYN3-213ENST00000619146 C5P01031 1676 aa12.83□□□□□ -0.35
SYN3-213ENST00000619146 IL2RBP14784 551 aa12.83□□□□□ -0.36
SYN3-213ENST00000619146 NME9Q86XW9 330 aa12.83□□□□□ -0.36
SYN3-213ENST00000619146 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
SYN3-213ENST00000619146 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
SYN3-213ENST00000619146 ITGB4P16144 1822 aa12.83□□□□□ -0.36
SYN3-213ENST00000619146 MSH5O43196 834 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms