RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 DHX29Q7Z478 1369 aaKnown RBP8.52□□□□□ -1.05
CSMD2-210ENST00000619121 WASHC4Q2M389 1173 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 VPS36Q86VN1 386 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 NSD2O96028 1365 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 USP47Q96K76 1375 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 USP8P40818 1118 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 APBB1IPQ7Z5R6 666 aaPredicted RBP8.52□□□□□ -1.05
CSMD2-210ENST00000619121 CCDC91Q7Z6B0 441 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.52□□□□□ -1.05
CSMD2-210ENST00000619121 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 MSH5O43196 834 aa8.52□□□□□ -1.05
CSMD2-210ENST00000619121 KIF2AO00139 706 aaPredicted RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 PLVAPQ9BX97 442 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 NCBP3Q53F19 620 aaKnown RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 CAVIN2O95810 425 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 SOS1Q07889 1333 aaPredicted RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 CFTRP13569 1480 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 EIF3JO75822 258 aaKnown RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 FAM69CQ0P6D2 419 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 A0A087WZG4 1122 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 TAOK3Q9H2K8 898 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 UBTFL1P0CB47 393 aaPredicted RBP8.51□□□□□ -1.05
CSMD2-210ENST00000619121 STK24Q9Y6E0 443 aa8.51□□□□□ -1.05
CSMD2-210ENST00000619121 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 PAF1Q8N7H5 531 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 ADGBQ8N7X0 1667 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 KINO60870 393 aaKnown RBP8.5□□□□□ -1.05
CSMD2-210ENST00000619121 SOGA3Q5TF21 947 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 CCDC66A2RUB6 948 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 RAB11FIP3O75154 756 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 MNS1Q8NEH6 495 aa8.5□□□□□ -1.05
CSMD2-210ENST00000619121 HNRNPMP52272 730 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD2-210ENST00000619121 HSPA5P11021 654 aaKnown RBP8.49□□□□□ -1.05
CSMD2-210ENST00000619121 NDC80O14777 642 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 MYO1BO43795 1136 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 RILPL2Q969X0 211 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 TAF3Q5VWG9 929 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 GABPB2Q8TAK5 448 aaPredicted RBP8.49□□□□□ -1.05
CSMD2-210ENST00000619121 TMEM87AQ8NBN3 555 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 DRC1Q96MC2 740 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 FAM107BQ9H098 131 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 WDR63Q8IWG1 891 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 MIER1Q8N108 512 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
CSMD2-210ENST00000619121 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
CSMD2-210ENST00000619121 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 KCNG1Q9UIX4 513 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 CTAGE5O15320 804 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 ANKRD45Q5TZF3 282 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 ABTB2Q8N961 1025 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 IKQ13123 557 aaPredicted RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 SEC63Q9UGP8 760 aaKnown RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 TDRD9Q8NDG6 1382 aaKnown RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 CREBRFQ8IUR6 639 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 CAVIN4Q5BKX8 364 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 CEP128Q6ZU80 1094 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 DDX11Q96FC9 970 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 FGD6Q6ZV73 1430 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 TTF1Q15361 905 aaPredicted RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 MCTP1Q6DN14 999 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 HOOK2Q96ED9 719 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 IGHMBP2P38935 993 aaKnown RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 MPHOSPH8Q99549 860 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 SOX12O15370 315 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 IFI16Q16666 785 aaKnown RBP8.48□□□□□ -1.05
CSMD2-210ENST00000619121 BIVM-ERCC5R4GMW8 1640 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 HOMER2Q9NSB8 354 aa8.48□□□□□ -1.05
CSMD2-210ENST00000619121 LRRC9Q6ZRR7 1453 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 SMTNL1A8MU46 457 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 GNAI2P04899 355 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 AMPD3Q01432 767 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 NCBP1Q09161 790 aaKnown RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 U3KPZ7 1027 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 GBP3Q9H0R5 595 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 CCDC94Q9BW85 323 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 RPRD2Q5VT52 1461 aaKnown RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 MPHOSPH10O00566 681 aaKnown RBP8.47□□□□□ -1.05
CSMD2-210ENST00000619121 MYO5CQ9NQX4 1742 aa8.47□□□□□ -1.05
CSMD2-210ENST00000619121 NAP1L1P55209 391 aaKnown RBP8.46□□□□□ -1.05
CSMD2-210ENST00000619121 PBRM1Q86U86 1689 aa8.46□□□□□ -1.05
CSMD2-210ENST00000619121 PDCL2Q8N4E4 241 aa8.46□□□□□ -1.05
CSMD2-210ENST00000619121 CUL5Q93034 780 aa8.46□□□□□ -1.05
CSMD2-210ENST00000619121 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.05
CSMD2-210ENST00000619121 NEBLO76041 1014 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms