RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 CCDC125Q86Z20 511 aa21.34■■□□□ 1.01
C9orf50-202ENST00000619117 CRB1P82279 1406 aa21.33■■□□□ 1.01
C9orf50-202ENST00000619117 BLMP54132 1417 aaPredicted RBP21.32■■□□□ 1
C9orf50-202ENST00000619117 SOX12O15370 315 aa21.32■■□□□ 1
C9orf50-202ENST00000619117 TCP11L2Q8N4U5 519 aa21.32■■□□□ 1
C9orf50-202ENST00000619117 THRAP3Q9Y2W1 955 aaKnown RBP21.31■■□□□ 1
C9orf50-202ENST00000619117 MYOM1P52179 1685 aa21.31■■□□□ 1
C9orf50-202ENST00000619117 USP35Q9P2H5 1018 aa21.3■■□□□ 1
C9orf50-202ENST00000619117 AXIN2Q9Y2T1 843 aa21.3■■□□□ 1
C9orf50-202ENST00000619117 WDR17Q8IZU2 1322 aa21.29■■□□□ 1
C9orf50-202ENST00000619117 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 1
C9orf50-202ENST00000619117 HSPA5P11021 654 aaKnown RBP21.25■□□□□ 0.99
C9orf50-202ENST00000619117 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
C9orf50-202ENST00000619117 COG3Q96JB2 828 aa21.25■□□□□ 0.99
C9orf50-202ENST00000619117 PARP4Q9UKK3 1724 aaKnown RBP21.25■□□□□ 0.99
C9orf50-202ENST00000619117 LTN1O94822 1766 aa21.24■□□□□ 0.99
C9orf50-202ENST00000619117 RGPD5Q99666 1765 aa21.23■□□□□ 0.99
C9orf50-202ENST00000619117 CARD10Q9BWT7 1032 aa21.22■□□□□ 0.99
C9orf50-202ENST00000619117 WNK3Q9BYP7 1800 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 FYB1O15117 783 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 SF3B2Q13435 895 aaKnown RBP21.21■□□□□ 0.99
C9orf50-202ENST00000619117 FAM182BQ5T319 152 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 ERBB3P21860 1342 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 LRRC37A3O60309 1634 aa21.21■□□□□ 0.99
C9orf50-202ENST00000619117 PDE3BQ13370 1112 aa21.2■□□□□ 0.98
C9orf50-202ENST00000619117 CCDC7Q96M83 1385 aa21.2■□□□□ 0.98
C9orf50-202ENST00000619117 DISP2A7MBM2 1401 aa21.2■□□□□ 0.98
C9orf50-202ENST00000619117 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
C9orf50-202ENST00000619117 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
C9orf50-202ENST00000619117 FAM196AQ6ZSG2 479 aa21.19■□□□□ 0.98
C9orf50-202ENST00000619117 CARD14Q9BXL6 1004 aa21.19■□□□□ 0.98
C9orf50-202ENST00000619117 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
C9orf50-202ENST00000619117 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
C9orf50-202ENST00000619117 IP6K1Q92551 441 aa21.17■□□□□ 0.98
C9orf50-202ENST00000619117 GGNBP2Q9H3C7 697 aa21.17■□□□□ 0.98
C9orf50-202ENST00000619117 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
C9orf50-202ENST00000619117 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
C9orf50-202ENST00000619117 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
C9orf50-202ENST00000619117 TNS1Q9HBL0 1735 aaKnown RBP21.15■□□□□ 0.98
C9orf50-202ENST00000619117 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
C9orf50-202ENST00000619117 C11orf95C9JLR9 678 aaPredicted RBP21.14■□□□□ 0.97
C9orf50-202ENST00000619117 BAG6P46379 1132 aa21.14■□□□□ 0.97
C9orf50-202ENST00000619117 DDB1Q16531 1140 aa21.14■□□□□ 0.97
C9orf50-202ENST00000619117 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
C9orf50-202ENST00000619117 PEAK1Q9H792 1746 aa21.13■□□□□ 0.97
C9orf50-202ENST00000619117 FAM208AQ9UK61 1670 aaKnown RBP21.13■□□□□ 0.97
C9orf50-202ENST00000619117 HOXC9P31274 260 aa21.12■□□□□ 0.97
C9orf50-202ENST00000619117 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
C9orf50-202ENST00000619117 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
C9orf50-202ENST00000619117 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
C9orf50-202ENST00000619117 CGNL1Q0VF96 1302 aa21.11■□□□□ 0.97
C9orf50-202ENST00000619117 FBLN1P23142 703 aa21.11■□□□□ 0.97
C9orf50-202ENST00000619117 AMPHP49418 695 aa21.11■□□□□ 0.97
C9orf50-202ENST00000619117 TRIM37O94972 964 aa21.1■□□□□ 0.97
C9orf50-202ENST00000619117 BCL9O00512 1426 aa21.1■□□□□ 0.97
C9orf50-202ENST00000619117 KIF24Q5T7B8 1368 aa21.1■□□□□ 0.97
C9orf50-202ENST00000619117 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
C9orf50-202ENST00000619117 IL2RBP14784 551 aa21.07■□□□□ 0.96
C9orf50-202ENST00000619117 EN1Q05925 392 aaPredicted RBP21.06■□□□□ 0.96
C9orf50-202ENST00000619117 MARCH10Q8NA82 808 aaPredicted RBP21.06■□□□□ 0.96
C9orf50-202ENST00000619117 FLT4P35916 1363 aa21.06■□□□□ 0.96
C9orf50-202ENST00000619117 EXOC5O00471 708 aa21.05■□□□□ 0.96
C9orf50-202ENST00000619117 LTV1Q96GA3 475 aaPredicted RBP21.05■□□□□ 0.96
C9orf50-202ENST00000619117 INSRP06213 1382 aa21.05■□□□□ 0.96
C9orf50-202ENST00000619117 PARD3Q8TEW0 1356 aa21.05■□□□□ 0.96
C9orf50-202ENST00000619117 PANK3Q9H999 370 aa21.04■□□□□ 0.96
C9orf50-202ENST00000619117 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
C9orf50-202ENST00000619117 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
C9orf50-202ENST00000619117 APBA3O96018 575 aa21.03■□□□□ 0.96
C9orf50-202ENST00000619117 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
C9orf50-202ENST00000619117 NSD2O96028 1365 aa21.02■□□□□ 0.96
C9orf50-202ENST00000619117 CAMKK2Q96RR4 588 aa21.02■□□□□ 0.96
C9orf50-202ENST00000619117 SBF2Q86WG5 1849 aa21.01■□□□□ 0.95
C9orf50-202ENST00000619117 EZH2Q15910 746 aaKnown RBP21■□□□□ 0.95
C9orf50-202ENST00000619117 EMILIN1Q9Y6C2 1016 aa21■□□□□ 0.95
C9orf50-202ENST00000619117 RREB1Q92766 1687 aa20.99■□□□□ 0.95
C9orf50-202ENST00000619117 HSP90AB2PQ58FF8 381 aa20.99■□□□□ 0.95
C9orf50-202ENST00000619117 BCL11BQ9C0K0 894 aaPredicted RBP20.99■□□□□ 0.95
C9orf50-202ENST00000619117 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
C9orf50-202ENST00000619117 RGPD2P0DJD1 1756 aa20.97■□□□□ 0.95
C9orf50-202ENST00000619117 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
C9orf50-202ENST00000619117 NBPF6Q5VWK0 638 aa20.97■□□□□ 0.95
C9orf50-202ENST00000619117 NBPF4Q96M43 638 aa20.97■□□□□ 0.95
C9orf50-202ENST00000619117 MEGF6O75095 1541 aa20.97■□□□□ 0.95
C9orf50-202ENST00000619117 WASHC2AQ641Q2 1341 aa20.96■□□□□ 0.95
C9orf50-202ENST00000619117 POLKQ9UBT6 870 aa20.95■□□□□ 0.94
C9orf50-202ENST00000619117 NHSQ6T4R5 1651 aa20.95■□□□□ 0.94
C9orf50-202ENST00000619117 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
C9orf50-202ENST00000619117 PTF1AQ7RTS3 328 aa20.94■□□□□ 0.94
C9orf50-202ENST00000619117 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
C9orf50-202ENST00000619117 NUP188Q5SRE5 1749 aa20.94■□□□□ 0.94
C9orf50-202ENST00000619117 PLSCR1O15162 318 aa20.93■□□□□ 0.94
C9orf50-202ENST00000619117 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
C9orf50-202ENST00000619117 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
C9orf50-202ENST00000619117 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
C9orf50-202ENST00000619117 SHANK3Q9BYB0 1731 aa20.91■□□□□ 0.94
C9orf50-202ENST00000619117 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
C9orf50-202ENST00000619117 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
C9orf50-202ENST00000619117 ZCRB1Q8TBF4 217 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms