RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 PIK3C2AO00443 1686 aa18.56■□□□□ 0.56
PDCD6-213ENST00000618970 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-213ENST00000618970 TTC21BQ7Z4L5 1316 aa18.55■□□□□ 0.56
PDCD6-213ENST00000618970 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-213ENST00000618970 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
PDCD6-213ENST00000618970 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
PDCD6-213ENST00000618970 PANK3Q9H999 370 aa18.54■□□□□ 0.56
PDCD6-213ENST00000618970 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
PDCD6-213ENST00000618970 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
PDCD6-213ENST00000618970 EVA1CP58658 441 aa18.52■□□□□ 0.56
PDCD6-213ENST00000618970 COL5A2P05997 1499 aaPredicted RBP18.52■□□□□ 0.55
PDCD6-213ENST00000618970 SLIT3O75094 1523 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 ZNF316A6NFI3 1004 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-213ENST00000618970 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-213ENST00000618970 TRIM37O94972 964 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 GCP02774 474 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
PDCD6-213ENST00000618970 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
PDCD6-213ENST00000618970 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
PDCD6-213ENST00000618970 FAM196AQ6ZSG2 479 aa18.5■□□□□ 0.55
PDCD6-213ENST00000618970 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
PDCD6-213ENST00000618970 RREB1Q92766 1687 aa18.49■□□□□ 0.55
PDCD6-213ENST00000618970 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
PDCD6-213ENST00000618970 NME9Q86XW9 330 aa18.48■□□□□ 0.55
PDCD6-213ENST00000618970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDCD6-213ENST00000618970 TCP11L2Q8N4U5 519 aa18.48■□□□□ 0.55
PDCD6-213ENST00000618970 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
PDCD6-213ENST00000618970 COL18A1P39060 1754 aa18.47■□□□□ 0.55
PDCD6-213ENST00000618970 FYB1O15117 783 aa18.47■□□□□ 0.55
PDCD6-213ENST00000618970 R3HDM1Q15032 1099 aaKnown RBP18.47■□□□□ 0.55
PDCD6-213ENST00000618970 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
PDCD6-213ENST00000618970 NUP188Q5SRE5 1749 aa18.46■□□□□ 0.55
PDCD6-213ENST00000618970 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
PDCD6-213ENST00000618970 NLRP6P59044 892 aa18.46■□□□□ 0.55
PDCD6-213ENST00000618970 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
PDCD6-213ENST00000618970 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
PDCD6-213ENST00000618970 CRB1P82279 1406 aa18.45■□□□□ 0.54
PDCD6-213ENST00000618970 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
PDCD6-213ENST00000618970 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 AATKQ6ZMQ8 1374 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 APBA3O96018 575 aa18.44■□□□□ 0.54
PDCD6-213ENST00000618970 THRAP3Q9Y2W1 955 aaKnown RBP18.44■□□□□ 0.54
PDCD6-213ENST00000618970 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
PDCD6-213ENST00000618970 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
PDCD6-213ENST00000618970 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
PDCD6-213ENST00000618970 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
PDCD6-213ENST00000618970 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
PDCD6-213ENST00000618970 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
PDCD6-213ENST00000618970 NFAT5O94916 1531 aa18.39■□□□□ 0.54
PDCD6-213ENST00000618970 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
PDCD6-213ENST00000618970 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
PDCD6-213ENST00000618970 MAP2P11137 1827 aaKnown RBP18.38■□□□□ 0.53
PDCD6-213ENST00000618970 KNSTRNQ9Y448 316 aa18.38■□□□□ 0.53
PDCD6-213ENST00000618970 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
PDCD6-213ENST00000618970 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
PDCD6-213ENST00000618970 LTN1O94822 1766 aa18.37■□□□□ 0.53
PDCD6-213ENST00000618970 RGPD3A6NKT7 1758 aaPredicted RBP18.36■□□□□ 0.53
PDCD6-213ENST00000618970 SOX12O15370 315 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 FBLN1P23142 703 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 RGPD4Q7Z3J3 1758 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 WDR17Q8IZU2 1322 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
PDCD6-213ENST00000618970 COG3Q96JB2 828 aa18.35■□□□□ 0.53
PDCD6-213ENST00000618970 NSD2O96028 1365 aa18.34■□□□□ 0.53
PDCD6-213ENST00000618970 DDB1Q16531 1140 aa18.33■□□□□ 0.52
PDCD6-213ENST00000618970 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.52
PDCD6-213ENST00000618970 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
PDCD6-213ENST00000618970 ABCC6O95255 1503 aa18.32■□□□□ 0.52
PDCD6-213ENST00000618970 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
PDCD6-213ENST00000618970 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
PDCD6-213ENST00000618970 CSB-PGBD3P0DP91 1061 aa18.29■□□□□ 0.52
PDCD6-213ENST00000618970 NBPF14Q5TI25 921 aa18.29■□□□□ 0.52
PDCD6-213ENST00000618970 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
PDCD6-213ENST00000618970 BCL9O00512 1426 aa18.28■□□□□ 0.52
PDCD6-213ENST00000618970 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
PDCD6-213ENST00000618970 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
PDCD6-213ENST00000618970 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
PDCD6-213ENST00000618970 PLSCR1O15162 318 aa18.26■□□□□ 0.51
PDCD6-213ENST00000618970 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
PDCD6-213ENST00000618970 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
PDCD6-213ENST00000618970 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
PDCD6-213ENST00000618970 CASZ1Q86V15 1759 aa18.26■□□□□ 0.51
PDCD6-213ENST00000618970 TNS2Q63HR2 1409 aa18.25■□□□□ 0.51
PDCD6-213ENST00000618970 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
PDCD6-213ENST00000618970 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-213ENST00000618970 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-213ENST00000618970 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
PDCD6-213ENST00000618970 PROM2Q8N271 834 aa18.23■□□□□ 0.51
PDCD6-213ENST00000618970 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
PDCD6-213ENST00000618970 ERBB3P21860 1342 aa18.23■□□□□ 0.51
PDCD6-213ENST00000618970 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
PDCD6-213ENST00000618970 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
PDCD6-213ENST00000618970 IP6K1Q92551 441 aa18.22■□□□□ 0.51
PDCD6-213ENST00000618970 EXOC5O00471 708 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms