RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.24
PCDHA4-204ENST00000618834 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.24
PCDHA4-204ENST00000618834 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
PCDHA4-204ENST00000618834 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.24
PCDHA4-204ENST00000618834 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
PCDHA4-204ENST00000618834 IMMTQ16891 758 aaKnown RBP13.52□□□□□ -0.25
PCDHA4-204ENST00000618834 PPM1EQ8WY54 764 aa13.52□□□□□ -0.25
PCDHA4-204ENST00000618834 PTPN14Q15678 1187 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 EFCAB2Q5VUJ9 269 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 KIF5CO60282 957 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 IFFO1Q0D2I5 559 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 RIC3Q7Z5B4 369 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 ZSCAN12O43309 604 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 CDKL5O76039 1030 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
PCDHA4-204ENST00000618834 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 MYZAPP0CAP1 466 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 SMC1AQ14683 1233 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 FEZ1Q99689 392 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 MSH5O43196 834 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 MAP3K11Q16584 847 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 FHOD3Q2V2M9 1422 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 SYCE3A1L190 88 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
PCDHA4-204ENST00000618834 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 CCDC175P0C221 793 aa13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 SPA17Q15506 151 aa13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-204ENST00000618834 AKNAQ7Z591 1439 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 CCDC7Q96M83 1385 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 SSR1P43307 286 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 ZHX3Q9H4I2 956 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 STK3Q13188 491 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
PCDHA4-204ENST00000618834 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 ANAPC15P60006 121 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 CFAP100Q494V2 611 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 GNAI3P08754 354 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 GCC1Q96CN9 775 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
PCDHA4-204ENST00000618834 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
PCDHA4-204ENST00000618834 NEBLO76041 1014 aa13.46□□□□□ -0.25
PCDHA4-204ENST00000618834 MINK1Q8N4C8 1332 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-204ENST00000618834 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCDHA4-204ENST00000618834 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-204ENST00000618834 HNRNPMP52272 730 aaKnown RBP eCLIP13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 UBE4AQ14139 1066 aa13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 MCM4P33991 863 aa13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 RAI14Q9P0K7 980 aa13.46□□□□□ -0.26
PCDHA4-204ENST00000618834 SPECC1LQ69YQ0 1117 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 CETN2P41208 172 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 MNAT1P51948 309 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 GNAI2P04899 355 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
PCDHA4-204ENST00000618834 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 BCCIPQ9P287 314 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 DYNC1I1O14576 645 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 SUPT6HQ7KZ85 1726 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 PPP1R12BO60237 982 aaPredicted RBP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 HMOX1P09601 288 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 SCAPERQ9BY12 1400 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
PCDHA4-204ENST00000618834 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms