RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 A0A0G2JS52 829 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 MYT1Q01538 1121 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 NCBP3Q53F19 620 aaKnown RBP6.88□□□□□ -1.31
SNCA-213ENST00000618500 TMEM132EQ6IEE7 984 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 SENP3-EIF4A1A0A087X0R7 540 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 C5P01031 1676 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 ZNF831Q5JPB2 1677 aa6.88□□□□□ -1.31
SNCA-213ENST00000618500 SLC16A10Q8TF71 515 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 ANO8Q9HCE9 1232 aaPredicted RBP6.87□□□□□ -1.31
SNCA-213ENST00000618500 USP6P35125 1406 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 TAF1LQ8IZX4 1826 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 DOT1LQ8TEK3 1739 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 WDR90Q96KV7 1748 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 STK32BQ9NY57 414 aa6.87□□□□□ -1.31
SNCA-213ENST00000618500 GIGYF1O75420 1035 aaPredicted RBP6.86□□□□□ -1.31
SNCA-213ENST00000618500 SLC15A2Q16348 729 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 MPHOSPH9Q99550 1183 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 SYT17Q9BSW7 474 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 WDR17Q8IZU2 1322 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 NUTM2FA1L443 756 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 POGKQ9P215 609 aa6.86□□□□□ -1.31
SNCA-213ENST00000618500 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
SNCA-213ENST00000618500 HMGB2P26583 209 aaKnown RBP6.85□□□□□ -1.31
SNCA-213ENST00000618500 PROM2Q8N271 834 aa6.85□□□□□ -1.31
SNCA-213ENST00000618500 FAM182BQ5T319 152 aa6.84□□□□□ -1.31
SNCA-213ENST00000618500 NGDNQ8NEJ9 315 aaKnown RBP6.84□□□□□ -1.31
SNCA-213ENST00000618500 NUDT16Q96DE0 195 aaKnown RBP6.84□□□□□ -1.31
SNCA-213ENST00000618500 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
SNCA-213ENST00000618500 PPIP5K1Q6PFW1 1433 aa6.84□□□□□ -1.31
SNCA-213ENST00000618500 C10orf71Q711Q0 1435 aa6.84□□□□□ -1.31
SNCA-213ENST00000618500 NLRP13Q86W25 1043 aa6.84□□□□□ -1.31
SNCA-213ENST00000618500 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
SNCA-213ENST00000618500 EVA1CP58658 441 aa6.84□□□□□ -1.32
SNCA-213ENST00000618500 USP31Q70CQ4 1352 aa6.84□□□□□ -1.32
SNCA-213ENST00000618500 PKD1L3Q7Z443 1732 aa6.84□□□□□ -1.32
SNCA-213ENST00000618500 TNRC6CQ9HCJ0 1690 aaKnown RBP6.83□□□□□ -1.32
SNCA-213ENST00000618500 ARXQ96QS3 562 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 CCDC61Q9Y6R9 512 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 TOGARAM1Q9Y4F4 1720 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 ACEP12821 1306 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 DDB1Q16531 1140 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 TXNRD1Q16881 649 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 SLC27A3Q5K4L6 730 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 LMOD2Q6P5Q4 547 aa6.83□□□□□ -1.32
SNCA-213ENST00000618500 AKT1S1Q96B36 256 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 BRCA1P38398 1863 aaKnown RBP6.82□□□□□ -1.32
SNCA-213ENST00000618500 GRIN3BO60391 1043 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 GCP02774 474 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 ARFGEF1Q9Y6D6 1849 aa6.82□□□□□ -1.32
SNCA-213ENST00000618500 MARCH10Q8NA82 808 aaPredicted RBP6.82□□□□□ -1.32
SNCA-213ENST00000618500 UBR3Q6ZT12 1888 aa6.81□□□□□ -1.32
SNCA-213ENST00000618500 CHRNA2Q15822 529 aa6.81□□□□□ -1.32
SNCA-213ENST00000618500 ATP10DQ9P241 1426 aa6.81□□□□□ -1.32
SNCA-213ENST00000618500 KCNH5Q8NCM2 988 aa6.81□□□□□ -1.32
SNCA-213ENST00000618500 RNF216Q9NWF9 866 aaPredicted RBP6.81□□□□□ -1.32
SNCA-213ENST00000618500 MINK1Q8N4C8 1332 aaPredicted RBP6.81□□□□□ -1.32
SNCA-213ENST00000618500 HSPA6P17066 643 aa6.8□□□□□ -1.32
SNCA-213ENST00000618500 CDK19Q9BWU1 502 aa6.8□□□□□ -1.32
SNCA-213ENST00000618500 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 NSD3Q9BZ95 1437 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 PAK3O75914 559 aaPredicted RBP6.79□□□□□ -1.32
SNCA-213ENST00000618500 ZBTB7AO95365 584 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
SNCA-213ENST00000618500 ARHGEF25Q86VW2 580 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 PLEKHG2Q9H7P9 1386 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 ANKRD26Q9UPS8 1709 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 NPM3O75607 178 aaKnown RBP6.79□□□□□ -1.32
SNCA-213ENST00000618500 ITGAEP38570 1179 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 ABTB2Q8N961 1025 aa6.79□□□□□ -1.32
SNCA-213ENST00000618500 NSD2O96028 1365 aa6.78□□□□□ -1.32
SNCA-213ENST00000618500 SBNO2Q9Y2G9 1366 aa6.78□□□□□ -1.32
SNCA-213ENST00000618500 MAP2P11137 1827 aaKnown RBP6.78□□□□□ -1.32
SNCA-213ENST00000618500 TRAK1Q9UPV9 953 aa6.78□□□□□ -1.32
SNCA-213ENST00000618500 POLD1P28340 1107 aa6.78□□□□□ -1.32
SNCA-213ENST00000618500 PNPLA7Q6ZV29 1317 aa6.77□□□□□ -1.33
SNCA-213ENST00000618500 ANKRD36BQ8N2N9 1353 aa6.77□□□□□ -1.33
SNCA-213ENST00000618500 PXDNLA1KZ92 1463 aa6.77□□□□□ -1.33
SNCA-213ENST00000618500 PDGFDQ9GZP0 370 aaPredicted RBP6.77□□□□□ -1.33
SNCA-213ENST00000618500 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
SNCA-213ENST00000618500 ITGB4P16144 1822 aa6.77□□□□□ -1.33
SNCA-213ENST00000618500 ZNF692Q9BU19 519 aaPredicted RBP6.76□□□□□ -1.33
SNCA-213ENST00000618500 DLEC1Q9Y238 1755 aa6.76□□□□□ -1.33
SNCA-213ENST00000618500 APLP1P51693 650 aa6.76□□□□□ -1.33
SNCA-213ENST00000618500 ZNF827Q17R98 1081 aa6.76□□□□□ -1.33
SNCA-213ENST00000618500 ATF5Q9Y2D1 282 aaPredicted RBP6.76□□□□□ -1.33
SNCA-213ENST00000618500 COL5A3P25940 1745 aaPredicted RBP6.76□□□□□ -1.33
SNCA-213ENST00000618500 EXOC5O00471 708 aa6.76□□□□□ -1.33
SNCA-213ENST00000618500 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNCA-213ENST00000618500 TOM1L2Q6ZVM7 507 aa6.75□□□□□ -1.33
SNCA-213ENST00000618500 HIRIP3Q9BW71 556 aaPredicted RBP6.75□□□□□ -1.33
SNCA-213ENST00000618500 CD163L1Q9NR16 1453 aa6.75□□□□□ -1.33
SNCA-213ENST00000618500 PTF1AQ7RTS3 328 aa6.75□□□□□ -1.33
SNCA-213ENST00000618500 RTL1A6NKG5 1358 aa6.75□□□□□ -1.33
SNCA-213ENST00000618500 GPR162Q16538 588 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms