RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 PDE3BQ13370 1112 aa31.03■■■□□ 2.56
SYNGR3-206ENST00000618464 TERF2IPQ9NYB0 399 aa31.03■■■□□ 2.56
SYNGR3-206ENST00000618464 A0A1W2PP64 1363 aa31.03■■■□□ 2.56
SYNGR3-206ENST00000618464 ARHGEF25Q86VW2 580 aa31.01■■■□□ 2.55
SYNGR3-206ENST00000618464 COL18A1P39060 1754 aa31.01■■■□□ 2.55
SYNGR3-206ENST00000618464 EDC4Q6P2E9 1401 aaKnown RBP31■■■□□ 2.55
SYNGR3-206ENST00000618464 NFAT5O94916 1531 aa31■■■□□ 2.55
SYNGR3-206ENST00000618464 TIMELESSQ9UNS1 1208 aa31■■■□□ 2.55
SYNGR3-206ENST00000618464 AXIN2Q9Y2T1 843 aa31■■■□□ 2.55
SYNGR3-206ENST00000618464 CAMKK2Q96RR4 588 aa30.99■■■□□ 2.55
SYNGR3-206ENST00000618464 THRAP3Q9Y2W1 955 aaKnown RBP30.99■■■□□ 2.55
SYNGR3-206ENST00000618464 CRB1P82279 1406 aa30.98■■■□□ 2.55
SYNGR3-206ENST00000618464 SLC24A1O60721 1099 aa30.98■■■□□ 2.55
SYNGR3-206ENST00000618464 USP31Q70CQ4 1352 aa30.97■■■□□ 2.55
SYNGR3-206ENST00000618464 APBA3O96018 575 aa30.97■■■□□ 2.55
SYNGR3-206ENST00000618464 R3HDM1Q15032 1099 aaKnown RBP30.97■■■□□ 2.55
SYNGR3-206ENST00000618464 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
SYNGR3-206ENST00000618464 LRP5O75197 1615 aa30.97■■■□□ 2.55
SYNGR3-206ENST00000618464 TMF1P82094 1093 aa30.96■■■□□ 2.55
SYNGR3-206ENST00000618464 NINLQ9Y2I6 1382 aa30.95■■■□□ 2.55
SYNGR3-206ENST00000618464 TOM1L2Q6ZVM7 507 aa30.95■■■□□ 2.55
SYNGR3-206ENST00000618464 USP54Q70EL1 1684 aa30.94■■■□□ 2.54
SYNGR3-206ENST00000618464 RGPD5Q99666 1765 aa30.94■■■□□ 2.54
SYNGR3-206ENST00000618464 PARP4Q9UKK3 1724 aaKnown RBP30.92■■■□□ 2.54
SYNGR3-206ENST00000618464 WDR17Q8IZU2 1322 aa30.92■■■□□ 2.54
SYNGR3-206ENST00000618464 CSB-PGBD3P0DP91 1061 aa30.91■■■□□ 2.54
SYNGR3-206ENST00000618464 PARD3Q8TEW0 1356 aa30.87■■■□□ 2.53
SYNGR3-206ENST00000618464 OVOS2A0A0J9YW53 1432 aa30.87■■■□□ 2.53
SYNGR3-206ENST00000618464 OVOS2Q6IE36 1432 aa30.87■■■□□ 2.53
SYNGR3-206ENST00000618464 ANKRD36BQ8N2N9 1353 aa30.86■■■□□ 2.53
SYNGR3-206ENST00000618464 LTN1O94822 1766 aa30.85■■■□□ 2.53
SYNGR3-206ENST00000618464 ABCC6O95255 1503 aa30.84■■■□□ 2.53
SYNGR3-206ENST00000618464 RREB1Q92766 1687 aa30.83■■■□□ 2.53
SYNGR3-206ENST00000618464 DDB1Q16531 1140 aa30.82■■■□□ 2.52
SYNGR3-206ENST00000618464 CDCA8Q53HL2 280 aa30.82■■■□□ 2.52
SYNGR3-206ENST00000618464 CARD10Q9BWT7 1032 aa30.82■■■□□ 2.52
SYNGR3-206ENST00000618464 LRRC37A3O60309 1634 aa30.82■■■□□ 2.52
SYNGR3-206ENST00000618464 PEAK1Q9H792 1746 aa30.81■■■□□ 2.52
SYNGR3-206ENST00000618464 WNK3Q9BYP7 1800 aa30.81■■■□□ 2.52
SYNGR3-206ENST00000618464 COG3Q96JB2 828 aa30.8■■■□□ 2.52
SYNGR3-206ENST00000618464 OVOS2A0A0G2JMS6 1433 aa30.8■■■□□ 2.52
SYNGR3-206ENST00000618464 NUP188Q5SRE5 1749 aa30.79■■■□□ 2.52
SYNGR3-206ENST00000618464 C11orf95C9JLR9 678 aaPredicted RBP30.77■■■□□ 2.52
SYNGR3-206ENST00000618464 ERBB3P21860 1342 aa30.76■■■□□ 2.52
SYNGR3-206ENST00000618464 MARCH10Q8NA82 808 aaPredicted RBP30.75■■■□□ 2.51
SYNGR3-206ENST00000618464 ANKRD24Q8TF21 1146 aa30.75■■■□□ 2.51
SYNGR3-206ENST00000618464 NLRP2Q9NX02 1062 aa30.75■■■□□ 2.51
SYNGR3-206ENST00000618464 FBLN1P23142 703 aa30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 PTF1AQ7RTS3 328 aa30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 CDCA7Q9BWT1 371 aaPredicted RBP30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 SBF2Q86WG5 1849 aa30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 CCDC7Q96M83 1385 aa30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 MYOM1P52179 1685 aa30.74■■■□□ 2.51
SYNGR3-206ENST00000618464 NBPF14Q5TI25 921 aa30.73■■■□□ 2.51
SYNGR3-206ENST00000618464 GGNBP2Q9H3C7 697 aa30.73■■■□□ 2.51
SYNGR3-206ENST00000618464 FYB1O15117 783 aa30.71■■■□□ 2.51
SYNGR3-206ENST00000618464 IP6K1Q92551 441 aa30.7■■■□□ 2.51
SYNGR3-206ENST00000618464 LTV1Q96GA3 475 aaPredicted RBP30.7■■■□□ 2.51
SYNGR3-206ENST00000618464 POLR3GLQ9BT43 218 aa30.7■■■□□ 2.51
SYNGR3-206ENST00000618464 MAP3K19Q56UN5 1328 aa30.7■■■□□ 2.5
SYNGR3-206ENST00000618464 PLSCR1O15162 318 aa30.68■■■□□ 2.5
SYNGR3-206ENST00000618464 BCL11BQ9C0K0 894 aaPredicted RBP30.68■■■□□ 2.5
SYNGR3-206ENST00000618464 HSPA5P11021 654 aaKnown RBP30.67■■■□□ 2.5
SYNGR3-206ENST00000618464 EIF4G2P78344 907 aaKnown RBP eCLIP30.67■■■□□ 2.5
SYNGR3-206ENST00000618464 KIF20BQ96Q89 1820 aa30.66■■■□□ 2.5
SYNGR3-206ENST00000618464 EXOC5O00471 708 aa30.66■■■□□ 2.5
SYNGR3-206ENST00000618464 AMPHP49418 695 aa30.66■■■□□ 2.5
SYNGR3-206ENST00000618464 CARD14Q9BXL6 1004 aa30.66■■■□□ 2.5
SYNGR3-206ENST00000618464 BCL9O00512 1426 aa30.64■■■□□ 2.5
SYNGR3-206ENST00000618464 NSD3Q9BZ95 1437 aa30.64■■■□□ 2.5
SYNGR3-206ENST00000618464 RRS1Q15050 365 aaKnown RBP30.64■■■□□ 2.5
SYNGR3-206ENST00000618464 TNS2Q63HR2 1409 aa30.64■■■□□ 2.49
SYNGR3-206ENST00000618464 HOXC9P31274 260 aa30.63■■■□□ 2.49
SYNGR3-206ENST00000618464 RGPD3A6NKT7 1758 aaPredicted RBP30.63■■■□□ 2.49
SYNGR3-206ENST00000618464 RGPD4Q7Z3J3 1758 aa30.63■■■□□ 2.49
SYNGR3-206ENST00000618464 IL2RBP14784 551 aa30.62■■■□□ 2.49
SYNGR3-206ENST00000618464 PROM2Q8N271 834 aa30.61■■■□□ 2.49
SYNGR3-206ENST00000618464 ANO8Q9HCE9 1232 aaPredicted RBP30.59■■■□□ 2.49
SYNGR3-206ENST00000618464 FAM208AQ9UK61 1670 aaKnown RBP30.58■■■□□ 2.49
SYNGR3-206ENST00000618464 RTL1A6NKG5 1358 aa30.56■■■□□ 2.48
SYNGR3-206ENST00000618464 KCNQ2O43526 872 aa30.55■■■□□ 2.48
SYNGR3-206ENST00000618464 SPON1Q9HCB6 807 aa30.54■■■□□ 2.48
SYNGR3-206ENST00000618464 RGPD2P0DJD1 1756 aa30.54■■■□□ 2.48
SYNGR3-206ENST00000618464 TXNRD1Q16881 649 aa30.51■■■□□ 2.47
SYNGR3-206ENST00000618464 CGNL1Q0VF96 1302 aa30.5■■■□□ 2.47
SYNGR3-206ENST00000618464 ACSBG1Q96GR2 724 aa30.5■■■□□ 2.47
SYNGR3-206ENST00000618464 PDGFDQ9GZP0 370 aaPredicted RBP30.5■■■□□ 2.47
SYNGR3-206ENST00000618464 HSP90AB2PQ58FF8 381 aa30.48■■■□□ 2.47
SYNGR3-206ENST00000618464 SMG6Q86US8 1419 aaKnown RBP30.47■■■□□ 2.47
SYNGR3-206ENST00000618464 USHBP1Q8N6Y0 703 aa30.47■■■□□ 2.47
SYNGR3-206ENST00000618464 PPP1R1BQ9UD71 204 aaPredicted RBP30.47■■■□□ 2.47
SYNGR3-206ENST00000618464 EMILIN1Q9Y6C2 1016 aa30.47■■■□□ 2.47
SYNGR3-206ENST00000618464 CASZ1Q86V15 1759 aa30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 NHSQ6T4R5 1651 aa30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 FLT4P35916 1363 aa30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 NBPF6Q5VWK0 638 aa30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 DDX54Q8TDD1 881 aaKnown RBP30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 NBPF4Q96M43 638 aa30.46■■■□□ 2.47
SYNGR3-206ENST00000618464 INSRP06213 1382 aa30.45■■■□□ 2.47
SYNGR3-206ENST00000618464 PPM1GO15355 546 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms