RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 CDK19Q9BWU1 502 aa11.49□□□□□ -0.57
CBWD1-227ENST00000618361 PDGFDQ9GZP0 370 aaPredicted RBP11.49□□□□□ -0.57
CBWD1-227ENST00000618361 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
CBWD1-227ENST00000618361 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
CBWD1-227ENST00000618361 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
CBWD1-227ENST00000618361 GPR162Q16538 588 aa11.47□□□□□ -0.57
CBWD1-227ENST00000618361 TXNRD1Q16881 649 aa11.47□□□□□ -0.57
CBWD1-227ENST00000618361 MYOM1P52179 1685 aa11.46□□□□□ -0.57
CBWD1-227ENST00000618361 PTF1AQ7RTS3 328 aa11.46□□□□□ -0.57
CBWD1-227ENST00000618361 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
CBWD1-227ENST00000618361 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
CBWD1-227ENST00000618361 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
CBWD1-227ENST00000618361 ARXQ96QS3 562 aa11.45□□□□□ -0.58
CBWD1-227ENST00000618361 WDR17Q8IZU2 1322 aa11.44□□□□□ -0.58
CBWD1-227ENST00000618361 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
CBWD1-227ENST00000618361 LRRC37A3O60309 1634 aa11.44□□□□□ -0.58
CBWD1-227ENST00000618361 UTRNP46939 3433 aa11.43□□□□□ -0.58
CBWD1-227ENST00000618361 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
CBWD1-227ENST00000618361 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
CBWD1-227ENST00000618361 EXOC5O00471 708 aa11.42□□□□□ -0.58
CBWD1-227ENST00000618361 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
CBWD1-227ENST00000618361 SLIT3O75094 1523 aa11.41□□□□□ -0.58
CBWD1-227ENST00000618361 NLRP6P59044 892 aa11.41□□□□□ -0.58
CBWD1-227ENST00000618361 ARHGEF28Q8N1W1 1705 aaKnown RBP11.4□□□□□ -0.58
CBWD1-227ENST00000618361 SLC16A10Q8TF71 515 aa11.4□□□□□ -0.58
CBWD1-227ENST00000618361 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
CBWD1-227ENST00000618361 CHD4Q14839 1912 aa11.4□□□□□ -0.58
CBWD1-227ENST00000618361 USP6P35125 1406 aa11.39□□□□□ -0.59
CBWD1-227ENST00000618361 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
CBWD1-227ENST00000618361 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
CBWD1-227ENST00000618361 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
CBWD1-227ENST00000618361 ZBTB7CA1YPR0 619 aa11.38□□□□□ -0.59
CBWD1-227ENST00000618361 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
CBWD1-227ENST00000618361 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
CBWD1-227ENST00000618361 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
CBWD1-227ENST00000618361 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
CBWD1-227ENST00000618361 CPSF1Q10570 1443 aaKnown RBP11.37□□□□□ -0.59
CBWD1-227ENST00000618361 POLD1P28340 1107 aa11.37□□□□□ -0.59
CBWD1-227ENST00000618361 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
CBWD1-227ENST00000618361 CSB-PGBD3P0DP91 1061 aa11.36□□□□□ -0.59
CBWD1-227ENST00000618361 COL18A1P39060 1754 aa11.36□□□□□ -0.59
CBWD1-227ENST00000618361 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CBWD1-227ENST00000618361 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
CBWD1-227ENST00000618361 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
CBWD1-227ENST00000618361 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
CBWD1-227ENST00000618361 ZNF827Q17R98 1081 aa11.34□□□□□ -0.59
CBWD1-227ENST00000618361 SLC27A3Q5K4L6 730 aa11.34□□□□□ -0.59
CBWD1-227ENST00000618361 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
CBWD1-227ENST00000618361 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
CBWD1-227ENST00000618361 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
CBWD1-227ENST00000618361 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
CBWD1-227ENST00000618361 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
CBWD1-227ENST00000618361 AKAP12Q02952 1782 aa11.33□□□□□ -0.59
CBWD1-227ENST00000618361 HSPA6P17066 643 aa11.33□□□□□ -0.6
CBWD1-227ENST00000618361 ABCC6O95255 1503 aa11.33□□□□□ -0.6
CBWD1-227ENST00000618361 NHSQ6T4R5 1651 aa11.33□□□□□ -0.6
CBWD1-227ENST00000618361 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 ACSBG1Q96GR2 724 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
CBWD1-227ENST00000618361 LRRC4BQ9NT99 713 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
CBWD1-227ENST00000618361 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
CBWD1-227ENST00000618361 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
CBWD1-227ENST00000618361 IL2RBP14784 551 aa11.3□□□□□ -0.6
CBWD1-227ENST00000618361 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
CBWD1-227ENST00000618361 NBPF1Q3BBV0 1214 aa11.29□□□□□ -0.6
CBWD1-227ENST00000618361 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
CBWD1-227ENST00000618361 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
CBWD1-227ENST00000618361 ERBB3P21860 1342 aa11.29□□□□□ -0.6
CBWD1-227ENST00000618361 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
CBWD1-227ENST00000618361 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
CBWD1-227ENST00000618361 TFCP2L1Q9NZI6 479 aa11.28□□□□□ -0.6
CBWD1-227ENST00000618361 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
CBWD1-227ENST00000618361 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
CBWD1-227ENST00000618361 NFAT5O94916 1531 aa11.27□□□□□ -0.61
CBWD1-227ENST00000618361 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
CBWD1-227ENST00000618361 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
CBWD1-227ENST00000618361 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
CBWD1-227ENST00000618361 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
CBWD1-227ENST00000618361 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
CBWD1-227ENST00000618361 SOX12O15370 315 aa11.25□□□□□ -0.61
CBWD1-227ENST00000618361 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
CBWD1-227ENST00000618361 ADCY9O60503 1353 aa11.25□□□□□ -0.61
CBWD1-227ENST00000618361 BTAF1O14981 1849 aa11.24□□□□□ -0.61
CBWD1-227ENST00000618361 APLP1P51693 650 aa11.24□□□□□ -0.61
CBWD1-227ENST00000618361 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
CBWD1-227ENST00000618361 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
CBWD1-227ENST00000618361 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
CBWD1-227ENST00000618361 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
CBWD1-227ENST00000618361 RGPD5Q99666 1765 aa11.21□□□□□ -0.61
CBWD1-227ENST00000618361 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
CBWD1-227ENST00000618361 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
CBWD1-227ENST00000618361 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
CBWD1-227ENST00000618361 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
CBWD1-227ENST00000618361 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
CBWD1-227ENST00000618361 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
CBWD1-227ENST00000618361 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
CBWD1-227ENST00000618361 NSD2O96028 1365 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms