RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PPP2R1AP30153 589 aa30.73■■■□□ 2.51
CBWD3-213ENST00000618217 IP6K1Q92551 441 aa30.73■■■□□ 2.51
CBWD3-213ENST00000618217 FNBP4Q8N3X1 1017 aaPredicted RBP30.73■■■□□ 2.51
CBWD3-213ENST00000618217 NWD2Q9ULI1 1742 aa30.72■■■□□ 2.51
CBWD3-213ENST00000618217 RTL1A6NKG5 1358 aa30.72■■■□□ 2.51
CBWD3-213ENST00000618217 NGLY1Q96IV0 654 aa30.72■■■□□ 2.51
CBWD3-213ENST00000618217 HOXC9P31274 260 aa30.71■■■□□ 2.51
CBWD3-213ENST00000618217 AMPHP49418 695 aa30.71■■■□□ 2.51
CBWD3-213ENST00000618217 MTHFSP49914 203 aa30.7■■■□□ 2.51
CBWD3-213ENST00000618217 FLT4P35916 1363 aa30.7■■■□□ 2.5
CBWD3-213ENST00000618217 DIEXFQ68CQ4 756 aaKnown RBP30.69■■■□□ 2.5
CBWD3-213ENST00000618217 BTG4Q9NY30 223 aa30.69■■■□□ 2.5
CBWD3-213ENST00000618217 BCL9LQ86UU0 1499 aa30.68■■■□□ 2.5
CBWD3-213ENST00000618217 PPM1GO15355 546 aaPredicted RBP30.68■■■□□ 2.5
CBWD3-213ENST00000618217 NRAPQ86VF7 1730 aa30.68■■■□□ 2.5
CBWD3-213ENST00000618217 BLMP54132 1417 aaPredicted RBP30.67■■■□□ 2.5
CBWD3-213ENST00000618217 HSP90AB2PQ58FF8 381 aa30.67■■■□□ 2.5
CBWD3-213ENST00000618217 CDK12Q9NYV4 1490 aaPredicted RBP30.67■■■□□ 2.5
CBWD3-213ENST00000618217 INSRP06213 1382 aa30.66■■■□□ 2.5
CBWD3-213ENST00000618217 ANP32CO43423 234 aa30.65■■■□□ 2.5
CBWD3-213ENST00000618217 AFF2P51816 1311 aa30.65■■■□□ 2.5
CBWD3-213ENST00000618217 MYBBP1AQ9BQG0 1328 aaKnown RBP30.65■■■□□ 2.5
CBWD3-213ENST00000618217 COL5A2P05997 1499 aaPredicted RBP30.65■■■□□ 2.5
CBWD3-213ENST00000618217 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.63■■■□□ 2.49
CBWD3-213ENST00000618217 UNC5CLQ8IV45 518 aa30.62■■■□□ 2.49
CBWD3-213ENST00000618217 ERBB3P21860 1342 aa30.61■■■□□ 2.49
CBWD3-213ENST00000618217 USP21Q9UK80 565 aa30.6■■■□□ 2.49
CBWD3-213ENST00000618217 COL3A1P02461 1466 aaPredicted RBP30.59■■■□□ 2.49
CBWD3-213ENST00000618217 ANKRD24Q8TF21 1146 aa30.58■■■□□ 2.49
CBWD3-213ENST00000618217 WDR17Q8IZU2 1322 aa30.56■■■□□ 2.48
CBWD3-213ENST00000618217 EVA1CP58658 441 aa30.56■■■□□ 2.48
CBWD3-213ENST00000618217 STRN4Q9NRL3 753 aa30.56■■■□□ 2.48
CBWD3-213ENST00000618217 RGS17Q9UGC6 210 aaPredicted RBP30.56■■■□□ 2.48
CBWD3-213ENST00000618217 LARP1Q6PKG0 1096 aaKnown RBP30.55■■■□□ 2.48
CBWD3-213ENST00000618217 LTV1Q96GA3 475 aaPredicted RBP30.55■■■□□ 2.48
CBWD3-213ENST00000618217 RGPD2P0DJD1 1756 aa30.55■■■□□ 2.48
CBWD3-213ENST00000618217 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
CBWD3-213ENST00000618217 FAM208AQ9UK61 1670 aaKnown RBP30.54■■■□□ 2.48
CBWD3-213ENST00000618217 ATRNO75882 1429 aa30.52■■■□□ 2.48
CBWD3-213ENST00000618217 IL13P35225 146 aa30.52■■■□□ 2.48
CBWD3-213ENST00000618217 VPS72Q15906 364 aa30.52■■■□□ 2.48
CBWD3-213ENST00000618217 ZNF772Q68DY9 489 aaPredicted RBP30.51■■■□□ 2.47
CBWD3-213ENST00000618217 CFAP53Q96M91 514 aa30.51■■■□□ 2.47
CBWD3-213ENST00000618217 CRB1P82279 1406 aa30.5■■■□□ 2.47
CBWD3-213ENST00000618217 CSB-PGBD3P0DP91 1061 aa30.49■■■□□ 2.47
CBWD3-213ENST00000618217 SPATA31A5Q5VU36 1347 aa30.49■■■□□ 2.47
CBWD3-213ENST00000618217 SPATA31A7Q8IWB4 1347 aa30.49■■■□□ 2.47
CBWD3-213ENST00000618217 RGPD1P0DJD0 1748 aa30.49■■■□□ 2.47
CBWD3-213ENST00000618217 DIAPH1O60610 1272 aaKnown RBP30.48■■■□□ 2.47
CBWD3-213ENST00000618217 NBPF6Q5VWK0 638 aa30.48■■■□□ 2.47
CBWD3-213ENST00000618217 NBPF4Q96M43 638 aa30.48■■■□□ 2.47
CBWD3-213ENST00000618217 QTRT2Q9H974 415 aaKnown RBP30.48■■■□□ 2.47
CBWD3-213ENST00000618217 TRPC5Q9UL62 973 aaPredicted RBP30.48■■■□□ 2.47
CBWD3-213ENST00000618217 TOM1L2Q6ZVM7 507 aa30.47■■■□□ 2.47
CBWD3-213ENST00000618217 CARD10Q9BWT7 1032 aa30.47■■■□□ 2.47
CBWD3-213ENST00000618217 CCDC184Q52MB2 194 aa30.47■■■□□ 2.47
CBWD3-213ENST00000618217 EYA1Q99502 592 aa30.47■■■□□ 2.47
CBWD3-213ENST00000618217 SPATA31A1Q5TZJ5 1347 aa30.46■■■□□ 2.47
CBWD3-213ENST00000618217 PHF23Q9BUL5 403 aaPredicted RBP30.46■■■□□ 2.47
CBWD3-213ENST00000618217 NLRP2Q9NX02 1062 aa30.46■■■□□ 2.47
CBWD3-213ENST00000618217 NCAPD2Q15021 1401 aa30.45■■■□□ 2.47
CBWD3-213ENST00000618217 GJD4Q96KN9 370 aaPredicted RBP30.44■■■□□ 2.46
CBWD3-213ENST00000618217 GLI3P10071 1580 aa30.43■■■□□ 2.46
CBWD3-213ENST00000618217 MIER1Q8N108 512 aa30.43■■■□□ 2.46
CBWD3-213ENST00000618217 IGSF1Q8N6C5 1336 aa30.43■■■□□ 2.46
CBWD3-213ENST00000618217 POTEAQ6S8J7 498 aa30.41■■■□□ 2.46
CBWD3-213ENST00000618217 CCDC9Q9Y3X0 531 aaKnown RBP30.4■■■□□ 2.46
CBWD3-213ENST00000618217 USP35Q9P2H5 1018 aa30.4■■■□□ 2.46
CBWD3-213ENST00000618217 TCP11L2Q8N4U5 519 aa30.39■■■□□ 2.46
CBWD3-213ENST00000618217 USHBP1Q8N6Y0 703 aa30.39■■■□□ 2.46
CBWD3-213ENST00000618217 THRAP3Q9Y2W1 955 aaKnown RBP30.38■■■□□ 2.45
CBWD3-213ENST00000618217 NUDCQ9Y266 331 aa30.36■■■□□ 2.45
CBWD3-213ENST00000618217 WNK3Q9BYP7 1800 aa30.36■■■□□ 2.45
CBWD3-213ENST00000618217 KDRP35968 1356 aa30.36■■■□□ 2.45
CBWD3-213ENST00000618217 BARGINQ6ZT62 677 aa30.36■■■□□ 2.45
CBWD3-213ENST00000618217 RBM6P78332 1123 aaKnown RBP30.35■■■□□ 2.45
CBWD3-213ENST00000618217 MRS2Q9HD23 443 aa30.35■■■□□ 2.45
CBWD3-213ENST00000618217 U2SURPO15042 1029 aaKnown RBP30.34■■■□□ 2.45
CBWD3-213ENST00000618217 ONECUT3O60422 494 aaPredicted RBP30.34■■■□□ 2.45
CBWD3-213ENST00000618217 AEBP1Q8IUX7 1158 aa30.34■■■□□ 2.45
CBWD3-213ENST00000618217 DISP2A7MBM2 1401 aa30.33■■■□□ 2.45
CBWD3-213ENST00000618217 CCER2I3L3R5 266 aa30.33■■■□□ 2.45
CBWD3-213ENST00000618217 SULT6B1Q6IMI4 303 aa30.33■■■□□ 2.45
CBWD3-213ENST00000618217 FAM98CQ17RN3 349 aaKnown RBP30.31■■■□□ 2.44
CBWD3-213ENST00000618217 THSD7AQ9UPZ6 1657 aa30.3■■■□□ 2.44
CBWD3-213ENST00000618217 U2AF1L5P0DN76 240 aaPredicted RBP30.3■■■□□ 2.44
CBWD3-213ENST00000618217 RXRBP28702 533 aa30.3■■■□□ 2.44
CBWD3-213ENST00000618217 U2AF1Q01081 240 aaKnown RBP eCLIP30.3■■■□□ 2.44
CBWD3-213ENST00000618217 HMOX1P09601 288 aa30.29■■■□□ 2.44
CBWD3-213ENST00000618217 PNISRQ8TF01 805 aaKnown RBP30.29■■■□□ 2.44
CBWD3-213ENST00000618217 MEGF6O75095 1541 aa30.29■■■□□ 2.44
CBWD3-213ENST00000618217 IL2RBP14784 551 aa30.28■■■□□ 2.44
CBWD3-213ENST00000618217 PARP4Q9UKK3 1724 aaKnown RBP30.27■■■□□ 2.44
CBWD3-213ENST00000618217 CDCA7Q9BWT1 371 aaPredicted RBP30.26■■■□□ 2.44
CBWD3-213ENST00000618217 RSPH6AQ9H0K4 717 aa30.26■■■□□ 2.44
CBWD3-213ENST00000618217 RAPGEF4Q8WZA2 1011 aa30.25■■■□□ 2.43
CBWD3-213ENST00000618217 FCHSD2O94868 740 aa30.25■■■□□ 2.43
CBWD3-213ENST00000618217 ADAMTS8Q9UP79 889 aa30.25■■■□□ 2.43
CBWD3-213ENST00000618217 OVOS2A0A0G2JMS6 1433 aa30.24■■■□□ 2.43
CBWD3-213ENST00000618217 WDR43Q15061 677 aaKnown RBP eCLIP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms