RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	NLRP6	P59044	892 aa		11.67	□□□□□ -0.54
TGIF1-223	ENST00000618001	PDE3B	Q13370	1112 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	OVOS2	A0A0G2JMS6	1433 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	OVOS2	A0A0J9YW53	1432 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	OVOS2	Q6IE36	1432 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	TTC21B	Q7Z4L5	1316 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	TRIM37	O94972	964 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	KCNH5	Q8NCM2	988 aa		11.66	□□□□□ -0.54
TGIF1-223	ENST00000618001	USP31	Q70CQ4	1352 aa		11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	EZH2	Q15910	746 aa	Known RBP	11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	CD163L1	Q9NR16	1453 aa		11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	USP35	Q9P2H5	1018 aa		11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	SBF2	Q86WG5	1849 aa		11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	WDR17	Q8IZU2	1322 aa		11.65	□□□□□ -0.54
TGIF1-223	ENST00000618001	PCGF6	Q9BYE7	350 aa		11.65	□□□□□ -0.55
TGIF1-223	ENST00000618001	PSD	A5PKW4	1024 aa	Predicted RBP	11.64	□□□□□ -0.55
TGIF1-223	ENST00000618001	ARHGEF25	Q86VW2	580 aa		11.64	□□□□□ -0.55
TGIF1-223	ENST00000618001	APBA3	O96018	575 aa		11.64	□□□□□ -0.55
TGIF1-223	ENST00000618001	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.64	□□□□□ -0.55
TGIF1-223	ENST00000618001	KTN1	Q86UP2	1357 aa	Known RBP	11.63	□□□□□ -0.55
TGIF1-223	ENST00000618001	PUS7	Q96PZ0	661 aa	Known RBP	11.63	□□□□□ -0.55
TGIF1-223	ENST00000618001	ANP32E	Q9BTT0	268 aa		11.63	□□□□□ -0.55
TGIF1-223	ENST00000618001	R3HDM1	Q15032	1099 aa	Known RBP	11.62	□□□□□ -0.55
TGIF1-223	ENST00000618001	AXIN2	Q9Y2T1	843 aa		11.62	□□□□□ -0.55
TGIF1-223	ENST00000618001	RGPD5	Q99666	1765 aa		11.62	□□□□□ -0.55
TGIF1-223	ENST00000618001	NEUROD1	Q13562	356 aa		11.62	□□□□□ -0.55
TGIF1-223	ENST00000618001	CARD10	Q9BWT7	1032 aa		11.61	□□□□□ -0.55
TGIF1-223	ENST00000618001	CLSPN	Q9HAW4	1339 aa		11.61	□□□□□ -0.55
TGIF1-223	ENST00000618001	CCDC7	Q96M83	1385 aa		11.61	□□□□□ -0.55
TGIF1-223	ENST00000618001	EDC4	Q6P2E9	1401 aa	Known RBP	11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	PLSCR1	O15162	318 aa		11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	DDB1	Q16531	1140 aa		11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	TOM1L2	Q6ZVM7	507 aa		11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	TNS2	Q63HR2	1409 aa		11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	NINL	Q9Y2I6	1382 aa		11.6	□□□□□ -0.55
TGIF1-223	ENST00000618001	CARD11	Q9BXL7	1154 aa		11.59	□□□□□ -0.55
TGIF1-223	ENST00000618001	LTN1	O94822	1766 aa		11.59	□□□□□ -0.55
TGIF1-223	ENST00000618001	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.59	□□□□□ -0.55
TGIF1-223	ENST00000618001	DAXX	Q9UER7	740 aa	Predicted RBP	11.59	□□□□□ -0.55
TGIF1-223	ENST00000618001	CASZ1	Q86V15	1759 aa		11.59	□□□□□ -0.55
TGIF1-223	ENST00000618001	NBPF14	Q5TI25	921 aa		11.58	□□□□□ -0.56
TGIF1-223	ENST00000618001	NHS	Q6T4R5	1651 aa		11.58	□□□□□ -0.56
TGIF1-223	ENST00000618001	FAM208A	Q9UK61	1670 aa	Known RBP	11.58	□□□□□ -0.56
TGIF1-223	ENST00000618001	TONSL	Q96HA7	1378 aa		11.58	□□□□□ -0.56
TGIF1-223	ENST00000618001	ZBTB7C	A1YPR0	619 aa		11.57	□□□□□ -0.56
TGIF1-223	ENST00000618001	MARCH10	Q8NA82	808 aa	Predicted RBP	11.57	□□□□□ -0.56
TGIF1-223	ENST00000618001		A0A1W2PP64	1363 aa		11.56	□□□□□ -0.56
TGIF1-223	ENST00000618001	ERBB3	P21860	1342 aa		11.56	□□□□□ -0.56
TGIF1-223	ENST00000618001	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.56	□□□□□ -0.56
TGIF1-223	ENST00000618001	GTF3C3	Q9Y5Q9	886 aa		11.55	□□□□□ -0.56
TGIF1-223	ENST00000618001	TERF2IP	Q9NYB0	399 aa		11.54	□□□□□ -0.56
TGIF1-223	ENST00000618001	TESK2	Q96S53	571 aa		11.54	□□□□□ -0.56
TGIF1-223	ENST00000618001	TRIM26	Q12899	539 aa	Predicted RBP	11.54	□□□□□ -0.56
TGIF1-223	ENST00000618001	NME9	Q86XW9	330 aa		11.54	□□□□□ -0.56
TGIF1-223	ENST00000618001	PAPPA	Q13219	1627 aa		11.54	□□□□□ -0.56
TGIF1-223	ENST00000618001	CSB-PGBD3	P0DP91	1061 aa		11.53	□□□□□ -0.56
TGIF1-223	ENST00000618001	EXOC5	O00471	708 aa		11.53	□□□□□ -0.56
TGIF1-223	ENST00000618001	SLC12A5	Q9H2X9	1139 aa		11.53	□□□□□ -0.56
TGIF1-223	ENST00000618001	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.52	□□□□□ -0.56
TGIF1-223	ENST00000618001	SOX12	O15370	315 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	KCNQ2	O43526	872 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	PTF1A	Q7RTS3	328 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	PROM2	Q8N271	834 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	TMC1	Q8TDI8	760 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	SPON1	Q9HCB6	807 aa		11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.51	□□□□□ -0.57
TGIF1-223	ENST00000618001	ANKRD36B	Q8N2N9	1353 aa		11.5	□□□□□ -0.57
TGIF1-223	ENST00000618001	IL2RB	P14784	551 aa		11.5	□□□□□ -0.57
TGIF1-223	ENST00000618001	ANKRD24	Q8TF21	1146 aa		11.5	□□□□□ -0.57
TGIF1-223	ENST00000618001	RTL1	A6NKG5	1358 aa		11.49	□□□□□ -0.57
TGIF1-223	ENST00000618001	IP6K1	Q92551	441 aa		11.49	□□□□□ -0.57
TGIF1-223	ENST00000618001	BTAF1	O14981	1849 aa		11.49	□□□□□ -0.57
TGIF1-223	ENST00000618001	QSER1	Q2KHR3	1735 aa		11.49	□□□□□ -0.57
TGIF1-223	ENST00000618001	ST20-MTHFS	A0A0A6YYL1	179 aa		11.48	□□□□□ -0.57
TGIF1-223	ENST00000618001	TXNRD1	Q16881	649 aa		11.48	□□□□□ -0.57
TGIF1-223	ENST00000618001	NLRP2	Q9NX02	1062 aa		11.48	□□□□□ -0.57
TGIF1-223	ENST00000618001	SHANK3	Q9BYB0	1731 aa		11.48	□□□□□ -0.57
TGIF1-223	ENST00000618001	MYOM1	P52179	1685 aa		11.47	□□□□□ -0.57
TGIF1-223	ENST00000618001	COL24A1	Q17RW2	1714 aa		11.46	□□□□□ -0.57
TGIF1-223	ENST00000618001	KIF20B	Q96Q89	1820 aa		11.46	□□□□□ -0.57
TGIF1-223	ENST00000618001	SLC15A2	Q16348	729 aa		11.46	□□□□□ -0.58
TGIF1-223	ENST00000618001	COG3	Q96JB2	828 aa		11.46	□□□□□ -0.58
TGIF1-223	ENST00000618001	STK32B	Q9NY57	414 aa		11.46	□□□□□ -0.58
TGIF1-223	ENST00000618001	USP47	Q96K76	1375 aa		11.46	□□□□□ -0.58
TGIF1-223	ENST00000618001	MAP3K19	Q56UN5	1328 aa		11.45	□□□□□ -0.58
TGIF1-223	ENST00000618001	HOXC9	P31274	260 aa		11.45	□□□□□ -0.58
TGIF1-223	ENST00000618001	KIF24	Q5T7B8	1368 aa		11.45	□□□□□ -0.58
TGIF1-223	ENST00000618001	PTGER2	P43116	358 aa		11.44	□□□□□ -0.58
TGIF1-223	ENST00000618001	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.44	□□□□□ -0.58
TGIF1-223	ENST00000618001	LY75	O60449	1722 aa		11.44	□□□□□ -0.58
TGIF1-223	ENST00000618001	DOT1L	Q8TEK3	1739 aa		11.44	□□□□□ -0.58
TGIF1-223	ENST00000618001	TMF1	P82094	1093 aa		11.44	□□□□□ -0.58
TGIF1-223	ENST00000618001	ANKRD26	Q9UPS8	1709 aa		11.43	□□□□□ -0.58
TGIF1-223	ENST00000618001	TIMELESS	Q9UNS1	1208 aa		11.43	□□□□□ -0.58
TGIF1-223	ENST00000618001	SGIP1	Q9BQI5	828 aa		11.43	□□□□□ -0.58
TGIF1-223	ENST00000618001	RGPD2	P0DJD1	1756 aa		11.43	□□□□□ -0.58
TGIF1-223	ENST00000618001	MEGF6	O75095	1541 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	MAP3K5	Q99683	1374 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	CDCA8	Q53HL2	280 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	SLC27A3	Q5K4L6	730 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms