RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 ARHGEF25Q86VW2 580 aa10.81□□□□□ -0.68
TARDBP-219ENST00000617757 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
TARDBP-219ENST00000617757 ABCC6O95255 1503 aa10.8□□□□□ -0.68
TARDBP-219ENST00000617757 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
TARDBP-219ENST00000617757 DIAPH1O60610 1272 aaKnown RBP10.8□□□□□ -0.68
TARDBP-219ENST00000617757 AMPHP49418 695 aa10.8□□□□□ -0.68
TARDBP-219ENST00000617757 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
TARDBP-219ENST00000617757 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
TARDBP-219ENST00000617757 HOXC9P31274 260 aa10.79□□□□□ -0.68
TARDBP-219ENST00000617757 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
TARDBP-219ENST00000617757 IP6K1Q92551 441 aa10.79□□□□□ -0.68
TARDBP-219ENST00000617757 COL14A1Q05707 1796 aaKnown RBP10.79□□□□□ -0.68
TARDBP-219ENST00000617757 CPDO75976 1380 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 IL13P35225 146 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
TARDBP-219ENST00000617757 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 ADAMTS8Q9UP79 889 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
TARDBP-219ENST00000617757 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
TARDBP-219ENST00000617757 BLMP54132 1417 aaPredicted RBP10.77□□□□□ -0.68
TARDBP-219ENST00000617757 CAMTA1Q9Y6Y1 1673 aa10.77□□□□□ -0.69
TARDBP-219ENST00000617757 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.69
TARDBP-219ENST00000617757 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
TARDBP-219ENST00000617757 JCADQ9P266 1359 aa10.77□□□□□ -0.69
TARDBP-219ENST00000617757 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
TARDBP-219ENST00000617757 HSPA1LP34931 641 aa10.76□□□□□ -0.69
TARDBP-219ENST00000617757 HAP1P54257 671 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-219ENST00000617757 DLG5Q8TDM6 1919 aa10.76□□□□□ -0.69
TARDBP-219ENST00000617757 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
TARDBP-219ENST00000617757 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
TARDBP-219ENST00000617757 NRAPQ86VF7 1730 aa10.75□□□□□ -0.69
TARDBP-219ENST00000617757 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
TARDBP-219ENST00000617757 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-219ENST00000617757 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
TARDBP-219ENST00000617757 CHRNA2Q15822 529 aa10.74□□□□□ -0.69
TARDBP-219ENST00000617757 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-219ENST00000617757 PRDM11Q9NQV5 511 aa10.74□□□□□ -0.69
TARDBP-219ENST00000617757 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
TARDBP-219ENST00000617757 ANKRD24Q8TF21 1146 aa10.73□□□□□ -0.69
TARDBP-219ENST00000617757 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-219ENST00000617757 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-219ENST00000617757 FCHSD2O94868 740 aa10.72□□□□□ -0.69
TARDBP-219ENST00000617757 HMOX1P09601 288 aa10.72□□□□□ -0.69
TARDBP-219ENST00000617757 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-219ENST00000617757 CCDC146Q8IYE0 955 aa10.72□□□□□ -0.69
TARDBP-219ENST00000617757 EYA1Q99502 592 aa10.72□□□□□ -0.69
TARDBP-219ENST00000617757 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
TARDBP-219ENST00000617757 COL5A2P05997 1499 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-219ENST00000617757 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
TARDBP-219ENST00000617757 ERBB3P21860 1342 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 KDRP35968 1356 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 NCAPD2Q15021 1401 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 SULT6B1Q6IMI4 303 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 RUNDC1Q96C34 613 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 PLEKHF1Q96S99 279 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 RSPH6AQ9H0K4 717 aa10.71□□□□□ -0.69
TARDBP-219ENST00000617757 PNNQ9H307 717 aaKnown RBP10.71□□□□□ -0.69
TARDBP-219ENST00000617757 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-219ENST00000617757 LRP6O75581 1613 aa10.7□□□□□ -0.7
TARDBP-219ENST00000617757 HNRNPUQ00839 825 aaKnown RBP eCLIP10.7□□□□□ -0.7
TARDBP-219ENST00000617757 NBPF6Q5VWK0 638 aa10.7□□□□□ -0.7
TARDBP-219ENST00000617757 AEBP1Q8IUX7 1158 aa10.7□□□□□ -0.7
TARDBP-219ENST00000617757 NBPF4Q96M43 638 aa10.7□□□□□ -0.7
TARDBP-219ENST00000617757 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
TARDBP-219ENST00000617757 ADAMTS2O95450 1211 aa10.69□□□□□ -0.7
TARDBP-219ENST00000617757 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
TARDBP-219ENST00000617757 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
TARDBP-219ENST00000617757 PARP4Q9UKK3 1724 aaKnown RBP10.69□□□□□ -0.7
TARDBP-219ENST00000617757 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 APAF1O14727 1248 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 USHBP1Q8N6Y0 703 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 SLIT2O94813 1529 aa10.68□□□□□ -0.7
TARDBP-219ENST00000617757 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 CSB-PGBD3P0DP91 1061 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 EVA1CP58658 441 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 TCP11L2Q8N4U5 519 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 NLRP2Q9NX02 1062 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 PKD1L3Q7Z443 1732 aa10.67□□□□□ -0.7
TARDBP-219ENST00000617757 ZBED9Q6R2W3 1325 aa10.66□□□□□ -0.7
TARDBP-219ENST00000617757 NEFMP07197 916 aa10.66□□□□□ -0.7
TARDBP-219ENST00000617757 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
TARDBP-219ENST00000617757 STRN4Q9NRL3 753 aa10.66□□□□□ -0.7
TARDBP-219ENST00000617757 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
TARDBP-219ENST00000617757 CRB1P82279 1406 aa10.66□□□□□ -0.7
TARDBP-219ENST00000617757 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
TARDBP-219ENST00000617757 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
TARDBP-219ENST00000617757 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
TARDBP-219ENST00000617757 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
TARDBP-219ENST00000617757 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
TARDBP-219ENST00000617757 BCL9LQ86UU0 1499 aa10.64□□□□□ -0.71
TARDBP-219ENST00000617757 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
TARDBP-219ENST00000617757 NFE2L2Q16236 605 aa10.64□□□□□ -0.71
TARDBP-219ENST00000617757 NGEFQ8N5V2 710 aa10.64□□□□□ -0.71
TARDBP-219ENST00000617757 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms