RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 COL18A1P39060 1754 aa23.7■■□□□ 1.38
LTBP4-235ENST00000617753 NFAT5O94916 1531 aa23.69■■□□□ 1.38
LTBP4-235ENST00000617753 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
LTBP4-235ENST00000617753 BAG6P46379 1132 aa23.69■■□□□ 1.38
LTBP4-235ENST00000617753 TOM1L2Q6ZVM7 507 aa23.69■■□□□ 1.38
LTBP4-235ENST00000617753 TMF1P82094 1093 aa23.68■■□□□ 1.38
LTBP4-235ENST00000617753 RGPD1P0DJD0 1748 aa23.67■■□□□ 1.38
LTBP4-235ENST00000617753 USP54Q70EL1 1684 aa23.67■■□□□ 1.38
LTBP4-235ENST00000617753 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
LTBP4-235ENST00000617753 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
LTBP4-235ENST00000617753 FAM196AQ6ZSG2 479 aa23.66■■□□□ 1.38
LTBP4-235ENST00000617753 AXIN2Q9Y2T1 843 aa23.66■■□□□ 1.38
LTBP4-235ENST00000617753 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
LTBP4-235ENST00000617753 PARP4Q9UKK3 1724 aaKnown RBP23.64■■□□□ 1.37
LTBP4-235ENST00000617753 ABCC6O95255 1503 aa23.64■■□□□ 1.37
LTBP4-235ENST00000617753 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
LTBP4-235ENST00000617753 CDCA8Q53HL2 280 aa23.62■■□□□ 1.37
LTBP4-235ENST00000617753 ANKRD36BQ8N2N9 1353 aa23.61■■□□□ 1.37
LTBP4-235ENST00000617753 OVOS2A0A0J9YW53 1432 aa23.6■■□□□ 1.37
LTBP4-235ENST00000617753 OVOS2Q6IE36 1432 aa23.6■■□□□ 1.37
LTBP4-235ENST00000617753 TNS1Q9HBL0 1735 aaKnown RBP23.6■■□□□ 1.37
LTBP4-235ENST00000617753 TRIM37O94972 964 aa23.6■■□□□ 1.37
LTBP4-235ENST00000617753 LTN1O94822 1766 aa23.6■■□□□ 1.37
LTBP4-235ENST00000617753 EN1Q05925 392 aaPredicted RBP23.59■■□□□ 1.37
LTBP4-235ENST00000617753 DDB1Q16531 1140 aa23.58■■□□□ 1.37
LTBP4-235ENST00000617753 CARD10Q9BWT7 1032 aa23.58■■□□□ 1.37
LTBP4-235ENST00000617753 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
LTBP4-235ENST00000617753 WNK3Q9BYP7 1800 aa23.57■■□□□ 1.36
LTBP4-235ENST00000617753 COG3Q96JB2 828 aa23.57■■□□□ 1.36
LTBP4-235ENST00000617753 CDCA7Q9BWT1 371 aaPredicted RBP23.57■■□□□ 1.36
LTBP4-235ENST00000617753 DISP2A7MBM2 1401 aa23.57■■□□□ 1.36
LTBP4-235ENST00000617753 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
LTBP4-235ENST00000617753 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
LTBP4-235ENST00000617753 OVOS2A0A0G2JMS6 1433 aa23.55■■□□□ 1.36
LTBP4-235ENST00000617753 ERBB3P21860 1342 aa23.54■■□□□ 1.36
LTBP4-235ENST00000617753 APBA3O96018 575 aa23.53■■□□□ 1.36
LTBP4-235ENST00000617753 NLRP2Q9NX02 1062 aa23.52■■□□□ 1.36
LTBP4-235ENST00000617753 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
LTBP4-235ENST00000617753 ANKRD24Q8TF21 1146 aa23.5■■□□□ 1.35
LTBP4-235ENST00000617753 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
LTBP4-235ENST00000617753 PEAK1Q9H792 1746 aa23.48■■□□□ 1.35
LTBP4-235ENST00000617753 IP6K1Q92551 441 aa23.48■■□□□ 1.35
LTBP4-235ENST00000617753 EXOC5O00471 708 aa23.47■■□□□ 1.35
LTBP4-235ENST00000617753 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
LTBP4-235ENST00000617753 GGNBP2Q9H3C7 697 aa23.47■■□□□ 1.35
LTBP4-235ENST00000617753 MYOM1P52179 1685 aa23.47■■□□□ 1.35
LTBP4-235ENST00000617753 FYB1O15117 783 aa23.46■■□□□ 1.35
LTBP4-235ENST00000617753 AMPHP49418 695 aa23.46■■□□□ 1.35
LTBP4-235ENST00000617753 MAP3K19Q56UN5 1328 aa23.46■■□□□ 1.35
LTBP4-235ENST00000617753 TNS2Q63HR2 1409 aa23.45■■□□□ 1.34
LTBP4-235ENST00000617753 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
LTBP4-235ENST00000617753 EIF4G2P78344 907 aaKnown RBP eCLIP23.45■■□□□ 1.34
LTBP4-235ENST00000617753 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
LTBP4-235ENST00000617753 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
LTBP4-235ENST00000617753 KIF20BQ96Q89 1820 aa23.45■■□□□ 1.34
LTBP4-235ENST00000617753 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
LTBP4-235ENST00000617753 IL2RBP14784 551 aa23.43■■□□□ 1.34
LTBP4-235ENST00000617753 FAM208AQ9UK61 1670 aaKnown RBP23.43■■□□□ 1.34
LTBP4-235ENST00000617753 SBF2Q86WG5 1849 aa23.43■■□□□ 1.34
LTBP4-235ENST00000617753 NSD3Q9BZ95 1437 aa23.42■■□□□ 1.34
LTBP4-235ENST00000617753 SRCAPQ6ZRS2 3230 aa23.42■■□□□ 1.34
LTBP4-235ENST00000617753 FBLN1P23142 703 aa23.42■■□□□ 1.34
LTBP4-235ENST00000617753 HOXC9P31274 260 aa23.42■■□□□ 1.34
LTBP4-235ENST00000617753 RREB1Q92766 1687 aa23.41■■□□□ 1.34
LTBP4-235ENST00000617753 BCL9O00512 1426 aa23.41■■□□□ 1.34
LTBP4-235ENST00000617753 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
LTBP4-235ENST00000617753 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
LTBP4-235ENST00000617753 R3HDM1Q15032 1099 aaKnown RBP23.4■■□□□ 1.34
LTBP4-235ENST00000617753 RRS1Q15050 365 aaKnown RBP23.4■■□□□ 1.34
LTBP4-235ENST00000617753 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
LTBP4-235ENST00000617753 CARD14Q9BXL6 1004 aa23.39■■□□□ 1.33
LTBP4-235ENST00000617753 NUP188Q5SRE5 1749 aa23.37■■□□□ 1.33
LTBP4-235ENST00000617753 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
LTBP4-235ENST00000617753 SMG6Q86US8 1419 aaKnown RBP23.35■■□□□ 1.33
LTBP4-235ENST00000617753 RGPD3A6NKT7 1758 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-235ENST00000617753 RGPD4Q7Z3J3 1758 aa23.35■■□□□ 1.33
LTBP4-235ENST00000617753 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
LTBP4-235ENST00000617753 PLSCR1O15162 318 aa23.34■■□□□ 1.33
LTBP4-235ENST00000617753 PTF1AQ7RTS3 328 aa23.34■■□□□ 1.33
LTBP4-235ENST00000617753 LRP5O75197 1615 aa23.33■■□□□ 1.32
LTBP4-235ENST00000617753 FLT4P35916 1363 aa23.32■■□□□ 1.32
LTBP4-235ENST00000617753 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
LTBP4-235ENST00000617753 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
LTBP4-235ENST00000617753 NHSQ6T4R5 1651 aa23.31■■□□□ 1.32
LTBP4-235ENST00000617753 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
LTBP4-235ENST00000617753 INSRP06213 1382 aa23.29■■□□□ 1.32
LTBP4-235ENST00000617753 DDX54Q8TDD1 881 aaKnown RBP23.29■■□□□ 1.32
LTBP4-235ENST00000617753 KCNQ2O43526 872 aa23.28■■□□□ 1.32
LTBP4-235ENST00000617753 HSP90AB2PQ58FF8 381 aa23.28■■□□□ 1.32
LTBP4-235ENST00000617753 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
LTBP4-235ENST00000617753 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
LTBP4-235ENST00000617753 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
LTBP4-235ENST00000617753 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
LTBP4-235ENST00000617753 PPM1GO15355 546 aaPredicted RBP23.26■■□□□ 1.31
LTBP4-235ENST00000617753 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
LTBP4-235ENST00000617753 MEGF6O75095 1541 aa23.26■■□□□ 1.31
LTBP4-235ENST00000617753 ZCRB1Q8TBF4 217 aaKnown RBP23.25■■□□□ 1.31
LTBP4-235ENST00000617753 RAPGEF4Q8WZA2 1011 aa23.25■■□□□ 1.31
LTBP4-235ENST00000617753 PANK3Q9H999 370 aa23.24■■□□□ 1.31
LTBP4-235ENST00000617753 TXNRD1Q16881 649 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms