RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 VPS37DQ86XT2 251 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-209ENST00000617103 PTPN14Q15678 1187 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 BLOC1S2Q6QNY1 142 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 STK3Q13188 491 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-209ENST00000617103 TXLNAP40222 546 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 ZMYND15Q9H091 742 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 CLCN1P35523 988 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 CALCOCO1Q9P1Z2 691 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
CLTCL1-209ENST00000617103 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 SMTNL1A8MU46 457 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 DYNC1I1O14576 645 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 RAD21O60216 631 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 GOLGA6L7A0A1B0GV03 622 aa12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-209ENST00000617103 SSFA2P28290 1259 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 ODF2Q5BJF6 829 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 CFTRP13569 1480 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 ERBINQ96RT1 1412 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 ERLIN2O94905 339 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 CCDC181Q5TID7 509 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 GBP3Q9H0R5 595 aa12.58□□□□□ -0.4
CLTCL1-209ENST00000617103 KDM4AO75164 1064 aa12.57□□□□□ -0.4
CLTCL1-209ENST00000617103 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
CLTCL1-209ENST00000617103 IQCEQ6IPM2 695 aa12.57□□□□□ -0.4
CLTCL1-209ENST00000617103 TXLNBQ8N3L3 684 aa12.57□□□□□ -0.4
CLTCL1-209ENST00000617103 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
CLTCL1-209ENST00000617103 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 KRT32Q14532 448 aa12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 PLEKHH2Q8IVE3 1493 aa12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 CCDC43Q96MW1 224 aaKnown RBP12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 SCAND2PQ9GZW5 306 aaPredicted RBP12.56□□□□□ -0.4
CLTCL1-209ENST00000617103 STIM1Q13586 685 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 PRIMPOLQ96LW4 560 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 TNNT1P13805 278 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 PSME1Q06323 249 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
CLTCL1-209ENST00000617103 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 CAMK4Q16566 473 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 NEMFO60524 1076 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 PLEKHH1Q9ULM0 1364 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 FAM193AP78312 1265 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 CRACR2AQ9BSW2 395 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 ANO10Q9NW15 660 aa12.54□□□□□ -0.4
CLTCL1-209ENST00000617103 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 NLRP6P59044 892 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 FCHSD2O94868 740 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 EVA1CP58658 441 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 SULT6B1Q6IMI4 303 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 URI1O94763 535 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 CDK5RAP3Q96JB5 506 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms