RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 FYB1O15117 783 aa19.12■□□□□ 0.65
UPK1A-203ENST00000616789 SOX12O15370 315 aa19.1■□□□□ 0.65
UPK1A-203ENST00000616789 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
UPK1A-203ENST00000616789 LTN1O94822 1766 aa19.1■□□□□ 0.65
UPK1A-203ENST00000616789 ABCC6O95255 1503 aa19.09■□□□□ 0.65
UPK1A-203ENST00000616789 EVA1CP58658 441 aa19.09■□□□□ 0.65
UPK1A-203ENST00000616789 FBLN1P23142 703 aa19.08■□□□□ 0.65
UPK1A-203ENST00000616789 CRB1P82279 1406 aa19.08■□□□□ 0.65
UPK1A-203ENST00000616789 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
UPK1A-203ENST00000616789 THRAP3Q9Y2W1 955 aaKnown RBP19.06■□□□□ 0.64
UPK1A-203ENST00000616789 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
UPK1A-203ENST00000616789 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
UPK1A-203ENST00000616789 TCP11L2Q8N4U5 519 aa19.06■□□□□ 0.64
UPK1A-203ENST00000616789 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
UPK1A-203ENST00000616789 COG3Q96JB2 828 aa19.05■□□□□ 0.64
UPK1A-203ENST00000616789 GGNBP2Q9H3C7 697 aa19.05■□□□□ 0.64
UPK1A-203ENST00000616789 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
UPK1A-203ENST00000616789 NSD3Q9BZ95 1437 aa19.03■□□□□ 0.64
UPK1A-203ENST00000616789 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
UPK1A-203ENST00000616789 IP6K1Q92551 441 aa19.02■□□□□ 0.64
UPK1A-203ENST00000616789 CARD10Q9BWT7 1032 aa19.02■□□□□ 0.64
UPK1A-203ENST00000616789 ERBB3P21860 1342 aa19.01■□□□□ 0.63
UPK1A-203ENST00000616789 MAP3K19Q56UN5 1328 aa19.01■□□□□ 0.63
UPK1A-203ENST00000616789 FAM182BQ5T319 152 aa19.01■□□□□ 0.63
UPK1A-203ENST00000616789 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
UPK1A-203ENST00000616789 TOM1L2Q6ZVM7 507 aa19■□□□□ 0.63
UPK1A-203ENST00000616789 DISP2A7MBM2 1401 aa19■□□□□ 0.63
UPK1A-203ENST00000616789 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
UPK1A-203ENST00000616789 CCDC125Q86Z20 511 aa18.99■□□□□ 0.63
UPK1A-203ENST00000616789 PANK3Q9H999 370 aa18.99■□□□□ 0.63
UPK1A-203ENST00000616789 BLMP54132 1417 aaPredicted RBP18.98■□□□□ 0.63
UPK1A-203ENST00000616789 A0A0G2JS52 829 aa18.97■□□□□ 0.63
UPK1A-203ENST00000616789 HOXC9P31274 260 aa18.97■□□□□ 0.63
UPK1A-203ENST00000616789 MYT1Q01538 1121 aa18.97■□□□□ 0.63
UPK1A-203ENST00000616789 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
UPK1A-203ENST00000616789 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
UPK1A-203ENST00000616789 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
UPK1A-203ENST00000616789 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
UPK1A-203ENST00000616789 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
UPK1A-203ENST00000616789 CGNL1Q0VF96 1302 aa18.94■□□□□ 0.62
UPK1A-203ENST00000616789 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
UPK1A-203ENST00000616789 RGPD2P0DJD1 1756 aa18.94■□□□□ 0.62
UPK1A-203ENST00000616789 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
UPK1A-203ENST00000616789 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
UPK1A-203ENST00000616789 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
UPK1A-203ENST00000616789 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
UPK1A-203ENST00000616789 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
UPK1A-203ENST00000616789 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
UPK1A-203ENST00000616789 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
UPK1A-203ENST00000616789 CDCA7Q9BWT1 371 aaPredicted RBP18.92■□□□□ 0.62
UPK1A-203ENST00000616789 TNS1Q9HBL0 1735 aaKnown RBP18.92■□□□□ 0.62
UPK1A-203ENST00000616789 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
UPK1A-203ENST00000616789 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
UPK1A-203ENST00000616789 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
UPK1A-203ENST00000616789 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
UPK1A-203ENST00000616789 DEFB132Q7Z7B7 95 aa18.91■□□□□ 0.62
UPK1A-203ENST00000616789 SRCAPQ6ZRS2 3230 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 AMPHP49418 695 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
UPK1A-203ENST00000616789 NLRP2Q9NX02 1062 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
UPK1A-203ENST00000616789 INSRP06213 1382 aa18.89■□□□□ 0.61
UPK1A-203ENST00000616789 DDB1Q16531 1140 aa18.89■□□□□ 0.61
UPK1A-203ENST00000616789 BCL9O00512 1426 aa18.88■□□□□ 0.61
UPK1A-203ENST00000616789 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
UPK1A-203ENST00000616789 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
UPK1A-203ENST00000616789 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
UPK1A-203ENST00000616789 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
UPK1A-203ENST00000616789 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
UPK1A-203ENST00000616789 FLT4P35916 1363 aa18.86■□□□□ 0.61
UPK1A-203ENST00000616789 TRIM37O94972 964 aa18.86■□□□□ 0.61
UPK1A-203ENST00000616789 NSD2O96028 1365 aa18.86■□□□□ 0.61
UPK1A-203ENST00000616789 EXOC5O00471 708 aa18.85■□□□□ 0.61
UPK1A-203ENST00000616789 IL2RBP14784 551 aa18.85■□□□□ 0.61
UPK1A-203ENST00000616789 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
UPK1A-203ENST00000616789 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
UPK1A-203ENST00000616789 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
UPK1A-203ENST00000616789 NCAPD2Q15021 1401 aa18.83■□□□□ 0.6
UPK1A-203ENST00000616789 CAMKK2Q96RR4 588 aa18.82■□□□□ 0.6
UPK1A-203ENST00000616789 SHANK3Q9BYB0 1731 aa18.82■□□□□ 0.6
UPK1A-203ENST00000616789 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
UPK1A-203ENST00000616789 EN1Q05925 392 aaPredicted RBP18.81■□□□□ 0.6
UPK1A-203ENST00000616789 KNSTRNQ9Y448 316 aa18.81■□□□□ 0.6
UPK1A-203ENST00000616789 MEGF6O75095 1541 aa18.81■□□□□ 0.6
UPK1A-203ENST00000616789 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
UPK1A-203ENST00000616789 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
UPK1A-203ENST00000616789 BAG6P46379 1132 aa18.8■□□□□ 0.6
UPK1A-203ENST00000616789 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
UPK1A-203ENST00000616789 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
UPK1A-203ENST00000616789 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
UPK1A-203ENST00000616789 APBA3O96018 575 aa18.77■□□□□ 0.6
UPK1A-203ENST00000616789 MORC1Q86VD1 984 aa18.77■□□□□ 0.6
UPK1A-203ENST00000616789 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
UPK1A-203ENST00000616789 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
UPK1A-203ENST00000616789 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
UPK1A-203ENST00000616789 EYA1Q99502 592 aa18.76■□□□□ 0.59
UPK1A-203ENST00000616789 RREB1Q92766 1687 aa18.75■□□□□ 0.59
UPK1A-203ENST00000616789 KCNQ2O43526 872 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms