RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
LHX1-202ENST00000616237 THSD7AQ9UPZ6 1657 aa23.72■■□□□ 1.39
LHX1-202ENST00000616237 A0A0G2JS52 829 aa23.69■■□□□ 1.38
LHX1-202ENST00000616237 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
LHX1-202ENST00000616237 MYT1Q01538 1121 aa23.69■■□□□ 1.38
LHX1-202ENST00000616237 FYB1O15117 783 aa23.68■■□□□ 1.38
LHX1-202ENST00000616237 KRT27Q7Z3Y8 459 aa23.68■■□□□ 1.38
LHX1-202ENST00000616237 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
LHX1-202ENST00000616237 BARGINQ6ZT62 677 aa23.67■■□□□ 1.38
LHX1-202ENST00000616237 CRB1P82279 1406 aa23.67■■□□□ 1.38
LHX1-202ENST00000616237 FBLN1P23142 703 aa23.66■■□□□ 1.38
LHX1-202ENST00000616237 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
LHX1-202ENST00000616237 COG3Q96JB2 828 aa23.66■■□□□ 1.38
LHX1-202ENST00000616237 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
LHX1-202ENST00000616237 GGNBP2Q9H3C7 697 aa23.65■■□□□ 1.38
LHX1-202ENST00000616237 WDR17Q8IZU2 1322 aa23.65■■□□□ 1.38
LHX1-202ENST00000616237 LTN1O94822 1766 aa23.65■■□□□ 1.38
LHX1-202ENST00000616237 ABCC6O95255 1503 aa23.65■■□□□ 1.38
LHX1-202ENST00000616237 NSD3Q9BZ95 1437 aa23.64■■□□□ 1.37
LHX1-202ENST00000616237 FAM182BQ5T319 152 aa23.63■■□□□ 1.37
LHX1-202ENST00000616237 TOM1L2Q6ZVM7 507 aa23.63■■□□□ 1.37
LHX1-202ENST00000616237 THRAP3Q9Y2W1 955 aaKnown RBP23.63■■□□□ 1.37
LHX1-202ENST00000616237 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
LHX1-202ENST00000616237 KIF20BQ96Q89 1820 aa23.59■■□□□ 1.37
LHX1-202ENST00000616237 ERBB3P21860 1342 aa23.58■■□□□ 1.37
LHX1-202ENST00000616237 CSB-PGBD3P0DP91 1061 aa23.58■■□□□ 1.37
LHX1-202ENST00000616237 CARD10Q9BWT7 1032 aa23.58■■□□□ 1.37
LHX1-202ENST00000616237 IP6K1Q92551 441 aa23.57■■□□□ 1.36
LHX1-202ENST00000616237 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
LHX1-202ENST00000616237 CCDC125Q86Z20 511 aa23.56■■□□□ 1.36
LHX1-202ENST00000616237 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
LHX1-202ENST00000616237 ANKRD24Q8TF21 1146 aa23.55■■□□□ 1.36
LHX1-202ENST00000616237 PANK3Q9H999 370 aa23.55■■□□□ 1.36
LHX1-202ENST00000616237 PARP4Q9UKK3 1724 aaKnown RBP23.55■■□□□ 1.36
LHX1-202ENST00000616237 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
LHX1-202ENST00000616237 HOXC9P31274 260 aa23.53■■□□□ 1.36
LHX1-202ENST00000616237 DISP2A7MBM2 1401 aa23.53■■□□□ 1.36
LHX1-202ENST00000616237 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
LHX1-202ENST00000616237 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
LHX1-202ENST00000616237 CGNL1Q0VF96 1302 aa23.51■■□□□ 1.35
LHX1-202ENST00000616237 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
LHX1-202ENST00000616237 LRRC37A3O60309 1634 aa23.51■■□□□ 1.35
LHX1-202ENST00000616237 DEFB132Q7Z7B7 95 aa23.51■■□□□ 1.35
LHX1-202ENST00000616237 NLRP2Q9NX02 1062 aa23.51■■□□□ 1.35
LHX1-202ENST00000616237 AMPHP49418 695 aa23.5■■□□□ 1.35
LHX1-202ENST00000616237 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
LHX1-202ENST00000616237 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
LHX1-202ENST00000616237 PEAK1Q9H792 1746 aa23.48■■□□□ 1.35
LHX1-202ENST00000616237 DDB1Q16531 1140 aa23.48■■□□□ 1.35
LHX1-202ENST00000616237 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
LHX1-202ENST00000616237 CDCA7Q9BWT1 371 aaPredicted RBP23.48■■□□□ 1.35
LHX1-202ENST00000616237 HSP90AB2PQ58FF8 381 aa23.45■■□□□ 1.34
LHX1-202ENST00000616237 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
LHX1-202ENST00000616237 TRIM37O94972 964 aa23.44■■□□□ 1.34
LHX1-202ENST00000616237 SF3B2Q13435 895 aaKnown RBP23.44■■□□□ 1.34
LHX1-202ENST00000616237 MARCH10Q8NA82 808 aaPredicted RBP23.44■■□□□ 1.34
LHX1-202ENST00000616237 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
LHX1-202ENST00000616237 TNS1Q9HBL0 1735 aaKnown RBP23.43■■□□□ 1.34
LHX1-202ENST00000616237 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
LHX1-202ENST00000616237 FLT4P35916 1363 aa23.42■■□□□ 1.34
LHX1-202ENST00000616237 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
LHX1-202ENST00000616237 ANKRD26Q9UPS8 1709 aa23.42■■□□□ 1.34
LHX1-202ENST00000616237 IL2RBP14784 551 aa23.41■■□□□ 1.34
LHX1-202ENST00000616237 INSRP06213 1382 aa23.41■■□□□ 1.34
LHX1-202ENST00000616237 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
LHX1-202ENST00000616237 RGPD2P0DJD1 1756 aa23.41■■□□□ 1.34
LHX1-202ENST00000616237 OVOS2A0A0G2JMS6 1433 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 TNS2Q63HR2 1409 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 EXOC5O00471 708 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 NBPF6Q5VWK0 638 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 POLKQ9UBT6 870 aa23.4■■□□□ 1.34
LHX1-202ENST00000616237 TNNT2P45379 298 aaPredicted RBP23.39■■□□□ 1.33
LHX1-202ENST00000616237 BAG6P46379 1132 aa23.39■■□□□ 1.33
LHX1-202ENST00000616237 EN1Q05925 392 aaPredicted RBP23.39■■□□□ 1.33
LHX1-202ENST00000616237 NSD2O96028 1365 aa23.38■■□□□ 1.33
LHX1-202ENST00000616237 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
LHX1-202ENST00000616237 AMER1Q5JTC6 1135 aaPredicted RBP23.38■■□□□ 1.33
LHX1-202ENST00000616237 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
LHX1-202ENST00000616237 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
LHX1-202ENST00000616237 PPM1GO15355 546 aaPredicted RBP23.37■■□□□ 1.33
LHX1-202ENST00000616237 PTF1AQ7RTS3 328 aa23.36■■□□□ 1.33
LHX1-202ENST00000616237 USHBP1Q8N6Y0 703 aa23.36■■□□□ 1.33
LHX1-202ENST00000616237 BCL9O00512 1426 aa23.36■■□□□ 1.33
LHX1-202ENST00000616237 SBF2Q86WG5 1849 aa23.34■■□□□ 1.33
LHX1-202ENST00000616237 APBA3O96018 575 aa23.34■■□□□ 1.33
LHX1-202ENST00000616237 SMG6Q86US8 1419 aaKnown RBP23.34■■□□□ 1.33
LHX1-202ENST00000616237 MEGF6O75095 1541 aa23.34■■□□□ 1.33
LHX1-202ENST00000616237 CAMKK2Q96RR4 588 aa23.33■■□□□ 1.33
LHX1-202ENST00000616237 EZH2Q15910 746 aaKnown RBP23.32■■□□□ 1.32
LHX1-202ENST00000616237 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
LHX1-202ENST00000616237 BCL11BQ9C0K0 894 aaPredicted RBP23.28■■□□□ 1.32
LHX1-202ENST00000616237 NCAPD2Q15021 1401 aa23.28■■□□□ 1.32
LHX1-202ENST00000616237 KCNQ2O43526 872 aa23.27■■□□□ 1.32
LHX1-202ENST00000616237 EIF4A2Q14240 407 aaKnown RBP23.27■■□□□ 1.31
LHX1-202ENST00000616237 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.31
LHX1-202ENST00000616237 EYA1Q99502 592 aa23.27■■□□□ 1.31
LHX1-202ENST00000616237 SHANK3Q9BYB0 1731 aa23.26■■□□□ 1.31
LHX1-202ENST00000616237 ZCRB1Q8TBF4 217 aaKnown RBP23.26■■□□□ 1.31
LHX1-202ENST00000616237 CC2D1BQ5T0F9 858 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms