RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-204ENST00000616051 RGPD5Q99666 1765 aa37.41■■■■□ 3.58
RCC1L-204ENST00000616051 LMO7Q8WWI1 1683 aa37.41■■■■□ 3.58
RCC1L-204ENST00000616051 KIF24Q5T7B8 1368 aa37.41■■■■□ 3.58
RCC1L-204ENST00000616051 HOXC9P31274 260 aa37.41■■■■□ 3.58
RCC1L-204ENST00000616051 NGLY1Q96IV0 654 aa37.4■■■■□ 3.58
RCC1L-204ENST00000616051 RTL1A6NKG5 1358 aa37.39■■■■□ 3.58
RCC1L-204ENST00000616051 ABCC6O95255 1503 aa37.38■■■■□ 3.58
RCC1L-204ENST00000616051 PLCH1Q4KWH8 1693 aa37.38■■■■□ 3.57
RCC1L-204ENST00000616051 CAMTA1Q9Y6Y1 1673 aa37.38■■■■□ 3.57
RCC1L-204ENST00000616051 MYBBP1AQ9BQG0 1328 aaKnown RBP37.38■■■■□ 3.57
RCC1L-204ENST00000616051 FLT4P35916 1363 aa37.37■■■■□ 3.57
RCC1L-204ENST00000616051 BTG4Q9NY30 223 aa37.36■■■■□ 3.57
RCC1L-204ENST00000616051 HSP90AB2PQ58FF8 381 aa37.36■■■■□ 3.57
RCC1L-204ENST00000616051 SLIT2O94813 1529 aa37.35■■■■□ 3.57
RCC1L-204ENST00000616051 FNBP4Q8N3X1 1017 aaPredicted RBP37.35■■■■□ 3.57
RCC1L-204ENST00000616051 NWD2Q9ULI1 1742 aa37.33■■■■□ 3.57
RCC1L-204ENST00000616051 CDK12Q9NYV4 1490 aaPredicted RBP37.33■■■■□ 3.57
RCC1L-204ENST00000616051 BLMP54132 1417 aaPredicted RBP37.33■■■■□ 3.57
RCC1L-204ENST00000616051 INSRP06213 1382 aa37.32■■■■□ 3.56
RCC1L-204ENST00000616051 AFF2P51816 1311 aa37.29■■■■□ 3.56
RCC1L-204ENST00000616051 COL5A2P05997 1499 aaPredicted RBP37.28■■■■□ 3.56
RCC1L-204ENST00000616051 BCL9LQ86UU0 1499 aa37.28■■■■□ 3.56
RCC1L-204ENST00000616051 NRAPQ86VF7 1730 aa37.27■■■■□ 3.56
RCC1L-204ENST00000616051 ANKRD24Q8TF21 1146 aa37.26■■■■□ 3.56
RCC1L-204ENST00000616051 EVA1CP58658 441 aa37.25■■■■□ 3.55
RCC1L-204ENST00000616051 UNC5CLQ8IV45 518 aa37.25■■■■□ 3.55
RCC1L-204ENST00000616051 LTV1Q96GA3 475 aaPredicted RBP37.25■■■■□ 3.55
RCC1L-204ENST00000616051 USP21Q9UK80 565 aa37.25■■■■□ 3.55
RCC1L-204ENST00000616051 STRN4Q9NRL3 753 aa37.25■■■■□ 3.55
RCC1L-204ENST00000616051 ERBB3P21860 1342 aa37.24■■■■□ 3.55
RCC1L-204ENST00000616051 CFAP53Q96M91 514 aa37.23■■■■□ 3.55
RCC1L-204ENST00000616051 COL3A1P02461 1466 aaPredicted RBP37.21■■■■□ 3.55
RCC1L-204ENST00000616051 EIF4A2Q14240 407 aaKnown RBP37.21■■■■□ 3.55
RCC1L-204ENST00000616051 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.21■■■■□ 3.55
RCC1L-204ENST00000616051 WDR17Q8IZU2 1322 aa37.2■■■■□ 3.55
RCC1L-204ENST00000616051 CSB-PGBD3P0DP91 1061 aa37.19■■■■□ 3.54
RCC1L-204ENST00000616051 LARP1Q6PKG0 1096 aaKnown RBP37.19■■■■□ 3.54
RCC1L-204ENST00000616051 IL13P35225 146 aa37.18■■■■□ 3.54
RCC1L-204ENST00000616051 RGPD2P0DJD1 1756 aa37.17■■■■□ 3.54
RCC1L-204ENST00000616051 DIAPH1O60610 1272 aaKnown RBP37.17■■■■□ 3.54
RCC1L-204ENST00000616051 MIER1Q8N108 512 aa37.16■■■■□ 3.54
RCC1L-204ENST00000616051 CCDC184Q52MB2 194 aa37.15■■■■□ 3.54
RCC1L-204ENST00000616051 FAM208AQ9UK61 1670 aaKnown RBP37.14■■■■□ 3.54
RCC1L-204ENST00000616051 TOM1L2Q6ZVM7 507 aa37.14■■■■□ 3.54
RCC1L-204ENST00000616051 VPS72Q15906 364 aa37.13■■■■□ 3.53
RCC1L-204ENST00000616051 ZNF772Q68DY9 489 aaPredicted RBP37.13■■■■□ 3.53
RCC1L-204ENST00000616051 NBPF6Q5VWK0 638 aa37.12■■■■□ 3.53
RCC1L-204ENST00000616051 NBPF4Q96M43 638 aa37.12■■■■□ 3.53
RCC1L-204ENST00000616051 NLRP2Q9NX02 1062 aa37.12■■■■□ 3.53
RCC1L-204ENST00000616051 RGS17Q9UGC6 210 aaPredicted RBP37.12■■■■□ 3.53
RCC1L-204ENST00000616051 CRB1P82279 1406 aa37.12■■■■□ 3.53
RCC1L-204ENST00000616051 EYA1Q99502 592 aa37.11■■■■□ 3.53
RCC1L-204ENST00000616051 PHF23Q9BUL5 403 aaPredicted RBP37.1■■■■□ 3.53
RCC1L-204ENST00000616051 TRPC5Q9UL62 973 aaPredicted RBP37.1■■■■□ 3.53
RCC1L-204ENST00000616051 ATRNO75882 1429 aa37.1■■■■□ 3.53
RCC1L-204ENST00000616051 CARD10Q9BWT7 1032 aa37.09■■■■□ 3.53
RCC1L-204ENST00000616051 QTRT2Q9H974 415 aaKnown RBP37.09■■■■□ 3.53
RCC1L-204ENST00000616051 SPATA31A5Q5VU36 1347 aa37.08■■■■□ 3.53
RCC1L-204ENST00000616051 SPATA31A7Q8IWB4 1347 aa37.08■■■■□ 3.53
RCC1L-204ENST00000616051 CCDC9Q9Y3X0 531 aaKnown RBP37.07■■■■□ 3.53
RCC1L-204ENST00000616051 RGPD1P0DJD0 1748 aa37.06■■■■□ 3.52
RCC1L-204ENST00000616051 SPATA31A1Q5TZJ5 1347 aa37.06■■■■□ 3.52
RCC1L-204ENST00000616051 NUDCQ9Y266 331 aa37.06■■■■□ 3.52
RCC1L-204ENST00000616051 MRS2Q9HD23 443 aa37.05■■■■□ 3.52
RCC1L-204ENST00000616051 USP35Q9P2H5 1018 aa37.05■■■■□ 3.52
RCC1L-204ENST00000616051 IGSF1Q8N6C5 1336 aa37.04■■■■□ 3.52
RCC1L-204ENST00000616051 U2SURPO15042 1029 aaKnown RBP37.03■■■■□ 3.52
RCC1L-204ENST00000616051 USHBP1Q8N6Y0 703 aa37.03■■■■□ 3.52
RCC1L-204ENST00000616051 GJD4Q96KN9 370 aaPredicted RBP37.03■■■■□ 3.52
RCC1L-204ENST00000616051 CCER2I3L3R5 266 aa37.02■■■■□ 3.52
RCC1L-204ENST00000616051 NCAPD2Q15021 1401 aa37■■■■□ 3.51
RCC1L-204ENST00000616051 TCP11L2Q8N4U5 519 aa36.99■■■■□ 3.51
RCC1L-204ENST00000616051 GLI3P10071 1580 aa36.98■■■■□ 3.51
RCC1L-204ENST00000616051 THRAP3Q9Y2W1 955 aaKnown RBP36.98■■■■□ 3.51
RCC1L-204ENST00000616051 SULT6B1Q6IMI4 303 aa36.97■■■■□ 3.51
RCC1L-204ENST00000616051 U2AF1L5P0DN76 240 aaPredicted RBP36.96■■■■□ 3.51
RCC1L-204ENST00000616051 U2AF1Q01081 240 aaKnown RBP eCLIP36.96■■■■□ 3.51
RCC1L-204ENST00000616051 POTEAQ6S8J7 498 aa36.96■■■■□ 3.51
RCC1L-204ENST00000616051 AEBP1Q8IUX7 1158 aa36.96■■■■□ 3.51
RCC1L-204ENST00000616051 HMOX1P09601 288 aa36.95■■■■□ 3.51
RCC1L-204ENST00000616051 BARGINQ6ZT62 677 aa36.93■■■■□ 3.5
RCC1L-204ENST00000616051 PNISRQ8TF01 805 aaKnown RBP36.93■■■■□ 3.5
RCC1L-204ENST00000616051 KDRP35968 1356 aa36.93■■■■□ 3.5
RCC1L-204ENST00000616051 RBM6P78332 1123 aaKnown RBP36.92■■■■□ 3.5
RCC1L-204ENST00000616051 WDR43Q15061 677 aaKnown RBP eCLIP36.91■■■■□ 3.5
RCC1L-204ENST00000616051 FAM98CQ17RN3 349 aaKnown RBP36.9■■■■□ 3.5
RCC1L-204ENST00000616051 WNK3Q9BYP7 1800 aa36.9■■■■□ 3.5
RCC1L-204ENST00000616051 IL2RBP14784 551 aa36.88■■■■□ 3.5
RCC1L-204ENST00000616051 DISP2A7MBM2 1401 aa36.88■■■■□ 3.49
RCC1L-204ENST00000616051 RXRBP28702 533 aa36.88■■■■□ 3.49
RCC1L-204ENST00000616051 ADAMTS8Q9UP79 889 aa36.88■■■■□ 3.49
RCC1L-204ENST00000616051 ONECUT3O60422 494 aaPredicted RBP36.87■■■■□ 3.49
RCC1L-204ENST00000616051 RAPGEF4Q8WZA2 1011 aa36.87■■■■□ 3.49
RCC1L-204ENST00000616051 FCHSD2O94868 740 aa36.86■■■■□ 3.49
RCC1L-204ENST00000616051 RSPH6AQ9H0K4 717 aa36.86■■■■□ 3.49
RCC1L-204ENST00000616051 MEGF6O75095 1541 aa36.85■■■■□ 3.49
RCC1L-204ENST00000616051 CDCA7Q9BWT1 371 aaPredicted RBP36.85■■■■□ 3.49
RCC1L-204ENST00000616051 TATP17735 454 aaPredicted RBP36.84■■■■□ 3.49
RCC1L-204ENST00000616051 PARP4Q9UKK3 1724 aaKnown RBP36.81■■■■□ 3.48
RCC1L-204ENST00000616051 PRKAR2BP31323 418 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms