RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
LINC00649-217ENST00000616030 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
LINC00649-217ENST00000616030 DISP2A7MBM2 1401 aa14.59□□□□□ -0.07
LINC00649-217ENST00000616030 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
LINC00649-217ENST00000616030 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
LINC00649-217ENST00000616030 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
LINC00649-217ENST00000616030 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.08
LINC00649-217ENST00000616030 PEAK1Q9H792 1746 aa14.58□□□□□ -0.08
LINC00649-217ENST00000616030 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
LINC00649-217ENST00000616030 TMC1Q8TDI8 760 aa14.57□□□□□ -0.08
LINC00649-217ENST00000616030 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
LINC00649-217ENST00000616030 FAM208AQ9UK61 1670 aaKnown RBP14.57□□□□□ -0.08
LINC00649-217ENST00000616030 WDR17Q8IZU2 1322 aa14.57□□□□□ -0.08
LINC00649-217ENST00000616030 NME9Q86XW9 330 aa14.56□□□□□ -0.08
LINC00649-217ENST00000616030 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
LINC00649-217ENST00000616030 KIF20BQ96Q89 1820 aa14.56□□□□□ -0.08
LINC00649-217ENST00000616030 BCL9O00512 1426 aa14.55□□□□□ -0.08
LINC00649-217ENST00000616030 EVA1CP58658 441 aa14.54□□□□□ -0.08
LINC00649-217ENST00000616030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00649-217ENST00000616030 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
LINC00649-217ENST00000616030 ERBB3P21860 1342 aa14.53□□□□□ -0.08
LINC00649-217ENST00000616030 CCDC7Q96M83 1385 aa14.52□□□□□ -0.08
LINC00649-217ENST00000616030 CARD10Q9BWT7 1032 aa14.52□□□□□ -0.09
LINC00649-217ENST00000616030 RGPD3A6NKT7 1758 aaPredicted RBP14.52□□□□□ -0.09
LINC00649-217ENST00000616030 RGPD4Q7Z3J3 1758 aa14.52□□□□□ -0.09
LINC00649-217ENST00000616030 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.09
LINC00649-217ENST00000616030 SRCAPQ6ZRS2 3230 aa14.51□□□□□ -0.09
LINC00649-217ENST00000616030 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
LINC00649-217ENST00000616030 C11orf95C9JLR9 678 aaPredicted RBP14.51□□□□□ -0.09
LINC00649-217ENST00000616030 CDCA7Q9BWT1 371 aaPredicted RBP14.51□□□□□ -0.09
LINC00649-217ENST00000616030 SBF2Q86WG5 1849 aa14.5□□□□□ -0.09
LINC00649-217ENST00000616030 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 KIF24Q5T7B8 1368 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 A0A0G2JS52 829 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 FYB1O15117 783 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC00649-217ENST00000616030 MYT1Q01538 1121 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 FAM196AQ6ZSG2 479 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 RREB1Q92766 1687 aa14.49□□□□□ -0.09
LINC00649-217ENST00000616030 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
LINC00649-217ENST00000616030 COG3Q96JB2 828 aa14.48□□□□□ -0.09
LINC00649-217ENST00000616030 USP35Q9P2H5 1018 aa14.48□□□□□ -0.09
LINC00649-217ENST00000616030 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
LINC00649-217ENST00000616030 IP6K1Q92551 441 aa14.47□□□□□ -0.09
LINC00649-217ENST00000616030 NSD3Q9BZ95 1437 aa14.47□□□□□ -0.09
LINC00649-217ENST00000616030 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
LINC00649-217ENST00000616030 HSPA5P11021 654 aaKnown RBP14.46□□□□□ -0.09
LINC00649-217ENST00000616030 SF3B2Q13435 895 aaKnown RBP14.46□□□□□ -0.09
LINC00649-217ENST00000616030 CARD14Q9BXL6 1004 aa14.46□□□□□ -0.09
LINC00649-217ENST00000616030 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
LINC00649-217ENST00000616030 SOX12O15370 315 aa14.45□□□□□ -0.1
LINC00649-217ENST00000616030 BAG6P46379 1132 aa14.45□□□□□ -0.1
LINC00649-217ENST00000616030 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
LINC00649-217ENST00000616030 PDE3BQ13370 1112 aa14.44□□□□□ -0.1
LINC00649-217ENST00000616030 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
LINC00649-217ENST00000616030 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
LINC00649-217ENST00000616030 HOXC9P31274 260 aa14.43□□□□□ -0.1
LINC00649-217ENST00000616030 DDB1Q16531 1140 aa14.43□□□□□ -0.1
LINC00649-217ENST00000616030 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
LINC00649-217ENST00000616030 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
LINC00649-217ENST00000616030 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
LINC00649-217ENST00000616030 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
LINC00649-217ENST00000616030 SHANK3Q9BYB0 1731 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 CSB-PGBD3P0DP91 1061 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 CAMKK2Q96RR4 588 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 NSD2O96028 1365 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 INSRP06213 1382 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 FLT4P35916 1363 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 LRP5O75197 1615 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
LINC00649-217ENST00000616030 RGPD2P0DJD1 1756 aa14.4□□□□□ -0.1
LINC00649-217ENST00000616030 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
LINC00649-217ENST00000616030 TRIM37O94972 964 aa14.39□□□□□ -0.11
LINC00649-217ENST00000616030 IL2RBP14784 551 aa14.39□□□□□ -0.11
LINC00649-217ENST00000616030 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
LINC00649-217ENST00000616030 PLEKHG2Q9H7P9 1386 aa14.37□□□□□ -0.11
LINC00649-217ENST00000616030 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
LINC00649-217ENST00000616030 EXOC5O00471 708 aa14.37□□□□□ -0.11
LINC00649-217ENST00000616030 PLSCR1O15162 318 aa14.37□□□□□ -0.11
LINC00649-217ENST00000616030 EN1Q05925 392 aaPredicted RBP14.37□□□□□ -0.11
LINC00649-217ENST00000616030 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
LINC00649-217ENST00000616030 MEGF6O75095 1541 aa14.36□□□□□ -0.11
LINC00649-217ENST00000616030 FBLN1P23142 703 aa14.36□□□□□ -0.11
LINC00649-217ENST00000616030 AMPHP49418 695 aa14.36□□□□□ -0.11
LINC00649-217ENST00000616030 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
LINC00649-217ENST00000616030 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
LINC00649-217ENST00000616030 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
LINC00649-217ENST00000616030 APBA3O96018 575 aa14.34□□□□□ -0.11
LINC00649-217ENST00000616030 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
LINC00649-217ENST00000616030 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
LINC00649-217ENST00000616030 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
LINC00649-217ENST00000616030 BTAF1O14981 1849 aa14.32□□□□□ -0.12
LINC00649-217ENST00000616030 PANK3Q9H999 370 aa14.32□□□□□ -0.12
LINC00649-217ENST00000616030 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
LINC00649-217ENST00000616030 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
LINC00649-217ENST00000616030 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
LINC00649-217ENST00000616030 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
LINC00649-217ENST00000616030 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms