RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 MCTP1Q6DN14 999 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 CCDC73Q6ZRK6 1079 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 LRCH2Q5VUJ6 765 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 BICD2Q8TD16 824 aa10.96□□□□□ -0.65
COL12A1-211ENST00000615798 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.65
COL12A1-211ENST00000615798 NBPF1Q3BBV0 1214 aa10.96□□□□□ -0.65
COL12A1-211ENST00000615798 CRACR2AQ9BSW2 395 aa10.96□□□□□ -0.65
COL12A1-211ENST00000615798 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
COL12A1-211ENST00000615798 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.66
COL12A1-211ENST00000615798 TRIM5Q9C035 493 aa10.96□□□□□ -0.66
COL12A1-211ENST00000615798 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 REC8O95072 547 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 RSRC1Q96IZ7 334 aaKnown RBP10.95□□□□□ -0.66
COL12A1-211ENST00000615798 DNAJC21Q5F1R6 531 aaKnown RBP10.95□□□□□ -0.66
COL12A1-211ENST00000615798 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 NOL10Q9BSC4 688 aaKnown RBP10.95□□□□□ -0.66
COL12A1-211ENST00000615798 BANK1Q8NDB2 785 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 MBD3O95983 291 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 CBX1P83916 185 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 NUP133Q8WUM0 1156 aa10.95□□□□□ -0.66
COL12A1-211ENST00000615798 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 HSPA4P34932 840 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 A0A1B0GUA9 196 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 SPECC1LQ69YQ0 1117 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 SMC2O95347 1197 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 SMC6Q96SB8 1091 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 NCOA1Q15788 1441 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 CHMP2AO43633 222 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 GBP6Q6ZN66 633 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 ANKRD30BQ9BXX2 1392 aa10.94□□□□□ -0.66
COL12A1-211ENST00000615798 ZFYVE27Q5T4F4 411 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 CCDC181Q5TID7 509 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 TRIM29Q14134 588 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 CEP120Q8N960 986 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL12A1-211ENST00000615798 APBB1O00213 710 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 FILIP1LQ4L180 1135 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 API5Q9BZZ5 524 aaKnown RBP10.93□□□□□ -0.66
COL12A1-211ENST00000615798 TACC1O75410 805 aa10.93□□□□□ -0.66
COL12A1-211ENST00000615798 TCEAL9Q9UHQ7 104 aa10.92□□□□□ -0.66
COL12A1-211ENST00000615798 KIF5BP33176 963 aa10.92□□□□□ -0.66
COL12A1-211ENST00000615798 DNAI2Q9GZS0 605 aa10.92□□□□□ -0.66
COL12A1-211ENST00000615798 RPGRIP1LQ68CZ1 1315 aa10.92□□□□□ -0.66
COL12A1-211ENST00000615798 ARHGEF12Q9NZN5 1544 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 KLHL10Q6JEL2 608 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 CAMSAP2Q08AD1 1489 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 UGGT2Q9NYU1 1516 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 NUP160Q12769 1436 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 UBXN4Q92575 508 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 GGT6Q6P531 493 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 ESPNB1AK53 854 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 NFKBIBQ15653 356 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 CPLX2Q6PUV4 134 aaKnown RBP10.91□□□□□ -0.66
COL12A1-211ENST00000615798 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL12A1-211ENST00000615798 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 RABGAP1Q9Y3P9 1069 aa10.91□□□□□ -0.66
COL12A1-211ENST00000615798 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
COL12A1-211ENST00000615798 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-211ENST00000615798 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.66
COL12A1-211ENST00000615798 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
COL12A1-211ENST00000615798 POTEB2H3BUK9 544 aa10.9□□□□□ -0.66
COL12A1-211ENST00000615798 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
COL12A1-211ENST00000615798 ZC4H2Q9NQZ6 224 aa10.9□□□□□ -0.66
COL12A1-211ENST00000615798 DYNC1I1O14576 645 aa10.9□□□□□ -0.67
COL12A1-211ENST00000615798 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.67
COL12A1-211ENST00000615798 MYZAPP0CAP1 466 aa10.9□□□□□ -0.67
COL12A1-211ENST00000615798 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.67
COL12A1-211ENST00000615798 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 MAGEC2Q9UBF1 373 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-211ENST00000615798 FLIIQ13045 1269 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 NAA25Q14CX7 972 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-211ENST00000615798 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-211ENST00000615798 SEPT10Q9P0V9 454 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 CCDC148Q8NFR7 591 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 INSRP06213 1382 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 GNAI1P63096 354 aa10.89□□□□□ -0.67
COL12A1-211ENST00000615798 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 SEPT8Q92599 483 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
COL12A1-211ENST00000615798 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-211ENST00000615798 SENP3-EIF4A1A0A087X0R7 540 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 ZNF853P0CG23 659 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 RFC1P35251 1148 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-211ENST00000615798 PPFIBP1Q86W92 1011 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 PPP1R1BQ9UD71 204 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-211ENST00000615798 SYNE3Q6ZMZ3 975 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 AP1ARQ63HQ0 302 aa10.88□□□□□ -0.67
COL12A1-211ENST00000615798 TRAK2O60296 914 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 LRRFIP2Q9Y608 721 aaKnown RBP10.87□□□□□ -0.67
COL12A1-211ENST00000615798 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
COL12A1-211ENST00000615798 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms