RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 USP54Q70EL1 1684 aa19.08■□□□□ 0.64
GTF2I-216ENST00000615596 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
GTF2I-216ENST00000615596 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
GTF2I-216ENST00000615596 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
GTF2I-216ENST00000615596 CARD14Q9BXL6 1004 aa19.06■□□□□ 0.64
GTF2I-216ENST00000615596 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
GTF2I-216ENST00000615596 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
GTF2I-216ENST00000615596 SEPT12Q8IYM1 358 aa19.05■□□□□ 0.64
GTF2I-216ENST00000615596 AXIN2Q9Y2T1 843 aa19.05■□□□□ 0.64
GTF2I-216ENST00000615596 COL5A2P05997 1499 aaPredicted RBP19.04■□□□□ 0.64
GTF2I-216ENST00000615596 FYB1O15117 783 aa19.04■□□□□ 0.64
GTF2I-216ENST00000615596 FAM98CQ17RN3 349 aaKnown RBP19.04■□□□□ 0.64
GTF2I-216ENST00000615596 COG3Q96JB2 828 aa19.04■□□□□ 0.64
GTF2I-216ENST00000615596 COL18A1P39060 1754 aa19.04■□□□□ 0.64
GTF2I-216ENST00000615596 EP400Q96L91 3159 aa19.03■□□□□ 0.64
GTF2I-216ENST00000615596 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
GTF2I-216ENST00000615596 NSD3Q9BZ95 1437 aa19.01■□□□□ 0.63
GTF2I-216ENST00000615596 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
GTF2I-216ENST00000615596 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
GTF2I-216ENST00000615596 A0A0G2JS52 829 aa19■□□□□ 0.63
GTF2I-216ENST00000615596 MYT1Q01538 1121 aa19■□□□□ 0.63
GTF2I-216ENST00000615596 BARGINQ6ZT62 677 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 PANK3Q9H999 370 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 ABCC6O95255 1503 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 CRB1P82279 1406 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
GTF2I-216ENST00000615596 FBLN1P23142 703 aa18.97■□□□□ 0.63
GTF2I-216ENST00000615596 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
GTF2I-216ENST00000615596 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
GTF2I-216ENST00000615596 KRT27Q7Z3Y8 459 aa18.96■□□□□ 0.63
GTF2I-216ENST00000615596 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
GTF2I-216ENST00000615596 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.63
GTF2I-216ENST00000615596 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
GTF2I-216ENST00000615596 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
GTF2I-216ENST00000615596 LTN1O94822 1766 aa18.95■□□□□ 0.62
GTF2I-216ENST00000615596 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
GTF2I-216ENST00000615596 KIF20BQ96Q89 1820 aa18.95■□□□□ 0.62
GTF2I-216ENST00000615596 CSB-PGBD3P0DP91 1061 aa18.94■□□□□ 0.62
GTF2I-216ENST00000615596 IP6K1Q92551 441 aa18.94■□□□□ 0.62
GTF2I-216ENST00000615596 ERBB3P21860 1342 aa18.93■□□□□ 0.62
GTF2I-216ENST00000615596 CARD10Q9BWT7 1032 aa18.92■□□□□ 0.62
GTF2I-216ENST00000615596 AMPHP49418 695 aa18.91■□□□□ 0.62
GTF2I-216ENST00000615596 RRS1Q15050 365 aaKnown RBP18.91■□□□□ 0.62
GTF2I-216ENST00000615596 ANKRD24Q8TF21 1146 aa18.91■□□□□ 0.62
GTF2I-216ENST00000615596 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
GTF2I-216ENST00000615596 HOXC9P31274 260 aa18.9■□□□□ 0.62
GTF2I-216ENST00000615596 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
GTF2I-216ENST00000615596 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
GTF2I-216ENST00000615596 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
GTF2I-216ENST00000615596 NLRP2Q9NX02 1062 aa18.88■□□□□ 0.61
GTF2I-216ENST00000615596 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
GTF2I-216ENST00000615596 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
GTF2I-216ENST00000615596 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
GTF2I-216ENST00000615596 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
GTF2I-216ENST00000615596 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
GTF2I-216ENST00000615596 CDCA7Q9BWT1 371 aaPredicted RBP18.86■□□□□ 0.61
GTF2I-216ENST00000615596 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
GTF2I-216ENST00000615596 PARP4Q9UKK3 1724 aaKnown RBP18.85■□□□□ 0.61
GTF2I-216ENST00000615596 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
GTF2I-216ENST00000615596 NSD2O96028 1365 aa18.84■□□□□ 0.61
GTF2I-216ENST00000615596 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
GTF2I-216ENST00000615596 DDB1Q16531 1140 aa18.84■□□□□ 0.61
GTF2I-216ENST00000615596 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
GTF2I-216ENST00000615596 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.6
GTF2I-216ENST00000615596 FLT4P35916 1363 aa18.82■□□□□ 0.6
GTF2I-216ENST00000615596 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
GTF2I-216ENST00000615596 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
GTF2I-216ENST00000615596 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
GTF2I-216ENST00000615596 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
GTF2I-216ENST00000615596 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
GTF2I-216ENST00000615596 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
GTF2I-216ENST00000615596 INSRP06213 1382 aa18.81■□□□□ 0.6
GTF2I-216ENST00000615596 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
GTF2I-216ENST00000615596 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
GTF2I-216ENST00000615596 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
GTF2I-216ENST00000615596 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
GTF2I-216ENST00000615596 IL2RBP14784 551 aa18.8■□□□□ 0.6
GTF2I-216ENST00000615596 EXOC5O00471 708 aa18.79■□□□□ 0.6
GTF2I-216ENST00000615596 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
GTF2I-216ENST00000615596 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
GTF2I-216ENST00000615596 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
GTF2I-216ENST00000615596 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
GTF2I-216ENST00000615596 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
GTF2I-216ENST00000615596 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
GTF2I-216ENST00000615596 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
GTF2I-216ENST00000615596 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.6
GTF2I-216ENST00000615596 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
GTF2I-216ENST00000615596 TRIM37O94972 964 aa18.76■□□□□ 0.59
GTF2I-216ENST00000615596 DEFB132Q7Z7B7 95 aa18.76■□□□□ 0.59
GTF2I-216ENST00000615596 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
GTF2I-216ENST00000615596 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
GTF2I-216ENST00000615596 RGPD2P0DJD1 1756 aa18.75■□□□□ 0.59
GTF2I-216ENST00000615596 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
GTF2I-216ENST00000615596 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
GTF2I-216ENST00000615596 RGPD1P0DJD0 1748 aa18.72■□□□□ 0.59
GTF2I-216ENST00000615596 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
GTF2I-216ENST00000615596 BAG6P46379 1132 aa18.72■□□□□ 0.59
GTF2I-216ENST00000615596 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms