RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 PTGER2P43116 358 aa26.37■■□□□ 1.81
FAM228B-210ENST00000615575 SRPK2P78362 688 aaKnown RBP26.37■■□□□ 1.81
FAM228B-210ENST00000615575 ATF5Q9Y2D1 282 aaPredicted RBP26.37■■□□□ 1.81
FAM228B-210ENST00000615575 UTRNP46939 3433 aa26.37■■□□□ 1.81
FAM228B-210ENST00000615575 TOM1L2Q6ZVM7 507 aa26.36■■□□□ 1.81
FAM228B-210ENST00000615575 MARCH10Q8NA82 808 aaPredicted RBP26.36■■□□□ 1.81
FAM228B-210ENST00000615575 ZNF784Q8NCA9 323 aaPredicted RBP26.36■■□□□ 1.81
FAM228B-210ENST00000615575 CABP2Q9NPB3 220 aa26.36■■□□□ 1.81
FAM228B-210ENST00000615575 USP6P35125 1406 aa26.35■■□□□ 1.81
FAM228B-210ENST00000615575 NBPF1Q3BBV0 1214 aa26.34■■□□□ 1.81
FAM228B-210ENST00000615575 QRICH2Q9H0J4 1663 aa26.34■■□□□ 1.81
FAM228B-210ENST00000615575 RGPD5Q99666 1765 aa26.34■■□□□ 1.81
FAM228B-210ENST00000615575 NLRP6P59044 892 aa26.33■■□□□ 1.81
FAM228B-210ENST00000615575 AXIN2Q9Y2T1 843 aa26.33■■□□□ 1.8
FAM228B-210ENST00000615575 WDR17Q8IZU2 1322 aa26.31■■□□□ 1.8
FAM228B-210ENST00000615575 CPSF1Q10570 1443 aaKnown RBP26.31■■□□□ 1.8
FAM228B-210ENST00000615575 FHDC1Q9C0D6 1143 aaPredicted RBP26.31■■□□□ 1.8
FAM228B-210ENST00000615575 BCL9O00512 1426 aa26.3■■□□□ 1.8
FAM228B-210ENST00000615575 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
FAM228B-210ENST00000615575 STK32BQ9NY57 414 aa26.29■■□□□ 1.8
FAM228B-210ENST00000615575 CENPJQ9HC77 1338 aaPredicted RBP26.29■■□□□ 1.8
FAM228B-210ENST00000615575 BRD4O60885 1362 aaPredicted RBP26.29■■□□□ 1.8
FAM228B-210ENST00000615575 CABP1Q9NZU7 370 aa26.28■■□□□ 1.8
FAM228B-210ENST00000615575 SYT17Q9BSW7 474 aa26.27■■□□□ 1.8
FAM228B-210ENST00000615575 CHD4Q14839 1912 aa26.27■■□□□ 1.8
FAM228B-210ENST00000615575 SLC15A2Q16348 729 aa26.26■■□□□ 1.79
FAM228B-210ENST00000615575 NHSQ6T4R5 1651 aa26.24■■□□□ 1.79
FAM228B-210ENST00000615575 SOX12O15370 315 aa26.24■■□□□ 1.79
FAM228B-210ENST00000615575 SGIP1Q9BQI5 828 aa26.24■■□□□ 1.79
FAM228B-210ENST00000615575 PAPPAQ13219 1627 aa26.24■■□□□ 1.79
FAM228B-210ENST00000615575 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
FAM228B-210ENST00000615575 TNS2Q63HR2 1409 aa26.22■■□□□ 1.79
FAM228B-210ENST00000615575 CDCA7Q9BWT1 371 aaPredicted RBP26.21■■□□□ 1.79
FAM228B-210ENST00000615575 MTFR1LQ9H019 292 aa26.21■■□□□ 1.79
FAM228B-210ENST00000615575 TRPM1Q7Z4N2 1603 aa26.21■■□□□ 1.79
FAM228B-210ENST00000615575 CSB-PGBD3P0DP91 1061 aa26.2■■□□□ 1.79
FAM228B-210ENST00000615575 ARHGEF25Q86VW2 580 aa26.2■■□□□ 1.79
FAM228B-210ENST00000615575 NFAT5O94916 1531 aa26.2■■□□□ 1.79
FAM228B-210ENST00000615575 CARD10Q9BWT7 1032 aa26.19■■□□□ 1.78
FAM228B-210ENST00000615575 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
FAM228B-210ENST00000615575 TTC21BQ7Z4L5 1316 aa26.15■■□□□ 1.78
FAM228B-210ENST00000615575 BTAF1O14981 1849 aa26.15■■□□□ 1.78
FAM228B-210ENST00000615575 ABCC6O95255 1503 aa26.15■■□□□ 1.78
FAM228B-210ENST00000615575 EXOC5O00471 708 aa26.15■■□□□ 1.78
FAM228B-210ENST00000615575 C1QTNF8P60827 252 aa26.15■■□□□ 1.78
FAM228B-210ENST00000615575 ARXQ96QS3 562 aa26.14■■□□□ 1.78
FAM228B-210ENST00000615575 ZNF827Q17R98 1081 aa26.13■■□□□ 1.77
FAM228B-210ENST00000615575 CCDC7Q96M83 1385 aa26.13■■□□□ 1.77
FAM228B-210ENST00000615575 KCNH5Q8NCM2 988 aa26.11■■□□□ 1.77
FAM228B-210ENST00000615575 MAP3K5Q99683 1374 aa26.1■■□□□ 1.77
FAM228B-210ENST00000615575 EVC2Q86UK5 1308 aa26.07■■□□□ 1.76
FAM228B-210ENST00000615575 MON2Q7Z3U7 1717 aa26.06■■□□□ 1.76
FAM228B-210ENST00000615575 LRRC4BQ9NT99 713 aa26.06■■□□□ 1.76
FAM228B-210ENST00000615575 TTC21AQ8NDW8 1320 aa26.05■■□□□ 1.76
FAM228B-210ENST00000615575 TUBGCP6Q96RT7 1819 aa26.05■■□□□ 1.76
FAM228B-210ENST00000615575 KLHL34Q8N239 644 aa26.05■■□□□ 1.76
FAM228B-210ENST00000615575 GOLGB1Q14789 3259 aaKnown RBP26.05■■□□□ 1.76
FAM228B-210ENST00000615575 LTN1O94822 1766 aa26.04■■□□□ 1.76
FAM228B-210ENST00000615575 GPR162Q16538 588 aa26.04■■□□□ 1.76
FAM228B-210ENST00000615575 KAT6BQ8WYB5 2073 aa26.03■■□□□ 1.76
FAM228B-210ENST00000615575 ERBB3P21860 1342 aa26.03■■□□□ 1.76
FAM228B-210ENST00000615575 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
FAM228B-210ENST00000615575 KTN1Q86UP2 1357 aaKnown RBP26.02■■□□□ 1.76
FAM228B-210ENST00000615575 USP54Q70EL1 1684 aa26.02■■□□□ 1.76
FAM228B-210ENST00000615575 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
FAM228B-210ENST00000615575 SHANK3Q9BYB0 1731 aa26.02■■□□□ 1.76
FAM228B-210ENST00000615575 COL24A1Q17RW2 1714 aa26.01■■□□□ 1.75
FAM228B-210ENST00000615575 ZNF692Q9BU19 519 aaPredicted RBP26.01■■□□□ 1.75
FAM228B-210ENST00000615575 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
FAM228B-210ENST00000615575 IL2RBP14784 551 aa25.99■■□□□ 1.75
FAM228B-210ENST00000615575 GIGYF1O75420 1035 aaPredicted RBP25.98■■□□□ 1.75
FAM228B-210ENST00000615575 AKT1S1Q96B36 256 aa25.98■■□□□ 1.75
FAM228B-210ENST00000615575 CEP350Q5VT06 3117 aa25.98■■□□□ 1.75
FAM228B-210ENST00000615575 PNPLA7Q6ZV29 1317 aa25.97■■□□□ 1.75
FAM228B-210ENST00000615575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.96■■□□□ 1.75
FAM228B-210ENST00000615575 NLGN2Q8NFZ4 835 aa25.96■■□□□ 1.75
FAM228B-210ENST00000615575 NME9Q86XW9 330 aa25.95■■□□□ 1.75
FAM228B-210ENST00000615575 KCNQ4P56696 695 aa25.95■■□□□ 1.74
FAM228B-210ENST00000615575 USP31Q70CQ4 1352 aa25.94■■□□□ 1.74
FAM228B-210ENST00000615575 ANKRD24Q8TF21 1146 aa25.94■■□□□ 1.74
FAM228B-210ENST00000615575 L3MBTL2Q969R5 705 aa25.94■■□□□ 1.74
FAM228B-210ENST00000615575 CD163L1Q9NR16 1453 aa25.93■■□□□ 1.74
FAM228B-210ENST00000615575 DOT1LQ8TEK3 1739 aa25.92■■□□□ 1.74
FAM228B-210ENST00000615575 POLD1P28340 1107 aa25.92■■□□□ 1.74
FAM228B-210ENST00000615575 IFFO2Q5TF58 517 aa25.91■■□□□ 1.74
FAM228B-210ENST00000615575 ROCK2O75116 1388 aaKnown RBP25.91■■□□□ 1.74
FAM228B-210ENST00000615575 SBNO2Q9Y2G9 1366 aa25.91■■□□□ 1.74
FAM228B-210ENST00000615575 SLC16A10Q8TF71 515 aa25.89■■□□□ 1.74
FAM228B-210ENST00000615575 LY75O60449 1722 aa25.88■■□□□ 1.73
FAM228B-210ENST00000615575 YBX3P16989 372 aaKnown RBP eCLIP25.87■■□□□ 1.73
FAM228B-210ENST00000615575 DDX54Q8TDD1 881 aaKnown RBP25.87■■□□□ 1.73
FAM228B-210ENST00000615575 TFCP2L1Q9NZI6 479 aa25.87■■□□□ 1.73
FAM228B-210ENST00000615575 SLC27A3Q5K4L6 730 aa25.86■■□□□ 1.73
FAM228B-210ENST00000615575 NSD2O96028 1365 aa25.86■■□□□ 1.73
FAM228B-210ENST00000615575 FAM208AQ9UK61 1670 aaKnown RBP25.85■■□□□ 1.73
FAM228B-210ENST00000615575 SYTL4Q96C24 671 aaPredicted RBP25.83■■□□□ 1.73
FAM228B-210ENST00000615575 LTV1Q96GA3 475 aaPredicted RBP25.82■■□□□ 1.72
FAM228B-210ENST00000615575 RGPD2P0DJD1 1756 aa25.81■■□□□ 1.72
FAM228B-210ENST00000615575 PRIM1P49642 420 aaKnown RBP25.81■■□□□ 1.72
FAM228B-210ENST00000615575 ANKRD36BQ8N2N9 1353 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms