RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 ASXL2Q76L83 1435 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 PHACTR3Q96KR7 559 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 SRCIN1Q9C0H9 1055 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 IGHDP01880 384 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 INTS3Q68E01 1043 aaKnown RBP4.61□□□□□ -1.67
LTN1-207ENST00000614971 BOLA2Q9H3K6 86 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 RAB11FIP4Q86YS3 637 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 TSPYL6Q8N831 410 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 SNRKQ9NRH2 765 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 ABCF2Q9UG63 623 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 BRPF3Q9ULD4 1205 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 DMRT2Q9Y5R5 561 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 GNAT3A8MTJ3 354 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 GSE1Q14687 1217 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 HDAC5Q9UQL6 1122 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 KIF14Q15058 1648 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 L1TD1Q5T7N2 865 aaKnown RBP4.61□□□□□ -1.67
LTN1-207ENST00000614971 FERMT3Q86UX7 667 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 IQSEC3Q9UPP2 1182 aaPredicted RBP4.61□□□□□ -1.67
LTN1-207ENST00000614971 SMC3Q9UQE7 1217 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 MAPKBP1O60336 1514 aa4.61□□□□□ -1.67
LTN1-207ENST00000614971 PHF14O94880 888 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 NGLY1Q96IV0 654 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 MYD88Q99836 296 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 LRRFIP2Q9Y608 721 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 FCHSD2O94868 740 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 KCNA6P17658 529 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 AKAP17AQ02040 695 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 KRT28Q7Z3Y7 464 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CHD1LQ86WJ1 897 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 ZNF592Q92610 1267 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CHMP4AQ9BY43 222 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 BACH2Q9BYV9 841 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CDC45O75419 566 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 TRDNQ13061 729 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CAVIN1Q6NZI2 390 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 DDX11Q96FC9 970 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 TCEANC2Q96MN5 208 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 C14orf93Q9H972 538 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 RPRD2Q5VT52 1461 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 ROCK1Q13464 1354 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 PRPF40AO75400 957 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 IDH1O75874 414 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 GNAI3P08754 354 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CCAR2Q8N163 923 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 MBIPQ9NS73 344 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 RALYLQ86SE5 291 aaKnown RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
LTN1-207ENST00000614971 C8orf58Q8NAV2 365 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 RUFY2Q8WXA3 655 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 ORAI2Q96SN7 254 aa4.6□□□□□ -1.67
LTN1-207ENST00000614971 PI4KAP2A4QPH2 592 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 RLBP1P12271 317 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 KIF6Q6ZMV9 814 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 PI4KAP1Q8N8J0 262 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 LRRCC1Q9C099 1032 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 SETD1BQ9UPS6 1966 aaKnown RBP4.59□□□□□ -1.67
LTN1-207ENST00000614971 IL27Q8NEV9 243 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 KIF21AQ7Z4S6 1674 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 IKQ13123 557 aaPredicted RBP4.59□□□□□ -1.67
LTN1-207ENST00000614971 TESK2Q96S53 571 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 SPG7Q9UQ90 795 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 ATAD2Q6PL18 1390 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 PDE3AQ14432 1141 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 STAC3Q96MF2 364 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 MPHOSPH8Q99549 860 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 PCDHB15Q9Y5E8 787 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 CCDC24Q8N4L8 307 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 NOC3LQ8WTT2 800 aaKnown RBP4.59□□□□□ -1.67
LTN1-207ENST00000614971 MEIS3Q99687 375 aa4.59□□□□□ -1.67
LTN1-207ENST00000614971 CUL7Q14999 1698 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 BECN2A8MW95 431 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 ERC2O15083 957 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 KIAA2012Q0VF49 1180 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 CCDC57Q2TAC2 916 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 SYNE3Q6ZMZ3 975 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 TRMT1LQ7Z2T5 733 aaKnown RBP4.59□□□□□ -1.68
LTN1-207ENST00000614971 UBE3BQ7Z3V4 1068 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 GDPD2Q9HCC8 539 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 JAG2Q9Y219 1238 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 DENND4BO75064 1496 aaPredicted RBP4.59□□□□□ -1.68
LTN1-207ENST00000614971 GUCY1B3Q02153 619 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 WDR63Q8IWG1 891 aa4.59□□□□□ -1.68
LTN1-207ENST00000614971 KDM5BQ9UGL1 1544 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 ECM2O94769 699 aaPredicted RBP4.58□□□□□ -1.68
LTN1-207ENST00000614971 CNTROBQ8N137 903 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 NUP133Q8WUM0 1156 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 TRIM34Q9BYJ4 488 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 CHMP5Q9NZZ3 219 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 DHX29Q7Z478 1369 aaKnown RBP4.58□□□□□ -1.68
LTN1-207ENST00000614971 GOLGA6L6A8MZA4 724 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 RBM5P52756 815 aaKnown RBP eCLIP4.58□□□□□ -1.68
LTN1-207ENST00000614971 HSP90AB3PQ58FF7 597 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 ANKRD24Q8TF21 1146 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 POLKQ9UBT6 870 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 BIVM-ERCC5R4GMW8 1640 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 TTC39AQ5SRH9 613 aa4.58□□□□□ -1.68
LTN1-207ENST00000614971 SYAP1Q96A49 352 aaPredicted RBP4.58□□□□□ -1.68
LTN1-207ENST00000614971 SMG6Q86US8 1419 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms