RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CCDC9Q9Y3X0 531 aaKnown RBP10.96□□□□□ -0.65
PCDH9-205ENST00000614931 CPDO75976 1380 aa10.95□□□□□ -0.66
PCDH9-205ENST00000614931 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
PCDH9-205ENST00000614931 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
PCDH9-205ENST00000614931 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
PCDH9-205ENST00000614931 SPATA31A5Q5VU36 1347 aa10.94□□□□□ -0.66
PCDH9-205ENST00000614931 SPATA31A7Q8IWB4 1347 aa10.94□□□□□ -0.66
PCDH9-205ENST00000614931 TTC21AQ8NDW8 1320 aa10.94□□□□□ -0.66
PCDH9-205ENST00000614931 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
PCDH9-205ENST00000614931 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
PCDH9-205ENST00000614931 LTN1O94822 1766 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 GCP02774 474 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 RALBP1Q15311 655 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 SLIT3O75094 1523 aa10.93□□□□□ -0.66
PCDH9-205ENST00000614931 CAMTA1Q9Y6Y1 1673 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
PCDH9-205ENST00000614931 NLRP6P59044 892 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
PCDH9-205ENST00000614931 KRT27Q7Z3Y8 459 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 NFAT5O94916 1531 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
PCDH9-205ENST00000614931 FBLN1P23142 703 aa10.91□□□□□ -0.66
PCDH9-205ENST00000614931 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
PCDH9-205ENST00000614931 MORC1Q86VD1 984 aa10.91□□□□□ -0.66
PCDH9-205ENST00000614931 BLMP54132 1417 aaPredicted RBP10.91□□□□□ -0.66
PCDH9-205ENST00000614931 EP400Q96L91 3159 aa10.9□□□□□ -0.66
PCDH9-205ENST00000614931 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
PCDH9-205ENST00000614931 TNNT2P45379 298 aaPredicted RBP10.9□□□□□ -0.66
PCDH9-205ENST00000614931 STRN4Q9NRL3 753 aa10.9□□□□□ -0.66
PCDH9-205ENST00000614931 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
PCDH9-205ENST00000614931 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
PCDH9-205ENST00000614931 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
PCDH9-205ENST00000614931 A0A0G2JS52 829 aa10.89□□□□□ -0.67
PCDH9-205ENST00000614931 EVA1CP58658 441 aa10.89□□□□□ -0.67
PCDH9-205ENST00000614931 MYT1Q01538 1121 aa10.89□□□□□ -0.67
PCDH9-205ENST00000614931 RGPD5Q99666 1765 aa10.89□□□□□ -0.67
PCDH9-205ENST00000614931 COL18A1P39060 1754 aa10.88□□□□□ -0.67
PCDH9-205ENST00000614931 LARP1Q6PKG0 1096 aaKnown RBP10.88□□□□□ -0.67
PCDH9-205ENST00000614931 BARGINQ6ZT62 677 aa10.88□□□□□ -0.67
PCDH9-205ENST00000614931 COG3Q96JB2 828 aa10.88□□□□□ -0.67
PCDH9-205ENST00000614931 COL5A2P05997 1499 aaPredicted RBP10.87□□□□□ -0.67
PCDH9-205ENST00000614931 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
PCDH9-205ENST00000614931 RGPD2P0DJD1 1756 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 TCP11L2Q8N4U5 519 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 USP35Q9P2H5 1018 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 THRAP3Q9Y2W1 955 aaKnown RBP10.86□□□□□ -0.67
PCDH9-205ENST00000614931 EMILIN1Q9Y6C2 1016 aa10.86□□□□□ -0.67
PCDH9-205ENST00000614931 SOX12O15370 315 aa10.85□□□□□ -0.67
PCDH9-205ENST00000614931 MTHFSP49914 203 aa10.85□□□□□ -0.67
PCDH9-205ENST00000614931 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
PCDH9-205ENST00000614931 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
PCDH9-205ENST00000614931 DEFB132Q7Z7B7 95 aa10.85□□□□□ -0.67
PCDH9-205ENST00000614931 POLKQ9UBT6 870 aa10.85□□□□□ -0.67
PCDH9-205ENST00000614931 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
PCDH9-205ENST00000614931 CRB1P82279 1406 aa10.84□□□□□ -0.67
PCDH9-205ENST00000614931 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
PCDH9-205ENST00000614931 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
PCDH9-205ENST00000614931 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
PCDH9-205ENST00000614931 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
PCDH9-205ENST00000614931 PARP4Q9UKK3 1724 aaKnown RBP10.83□□□□□ -0.68
PCDH9-205ENST00000614931 ABCC6O95255 1503 aa10.83□□□□□ -0.68
PCDH9-205ENST00000614931 WDR17Q8IZU2 1322 aa10.83□□□□□ -0.68
PCDH9-205ENST00000614931 INSRP06213 1382 aa10.82□□□□□ -0.68
PCDH9-205ENST00000614931 TNS1Q9HBL0 1735 aaKnown RBP10.82□□□□□ -0.68
PCDH9-205ENST00000614931 FAM196AQ6ZSG2 479 aa10.82□□□□□ -0.68
PCDH9-205ENST00000614931 BAG6P46379 1132 aa10.81□□□□□ -0.68
PCDH9-205ENST00000614931 PDE3BQ13370 1112 aa10.81□□□□□ -0.68
PCDH9-205ENST00000614931 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
PCDH9-205ENST00000614931 PNISRQ8TF01 805 aaKnown RBP10.81□□□□□ -0.68
PCDH9-205ENST00000614931 DISP2A7MBM2 1401 aa10.81□□□□□ -0.68
PCDH9-205ENST00000614931 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
PCDH9-205ENST00000614931 TRIM37O94972 964 aa10.79□□□□□ -0.68
PCDH9-205ENST00000614931 FAM9BQ8IZU0 186 aa10.79□□□□□ -0.68
PCDH9-205ENST00000614931 CARD10Q9BWT7 1032 aa10.79□□□□□ -0.68
PCDH9-205ENST00000614931 LRRC37A3O60309 1634 aa10.79□□□□□ -0.68
PCDH9-205ENST00000614931 RTL1A6NKG5 1358 aa10.78□□□□□ -0.68
PCDH9-205ENST00000614931 FLT4P35916 1363 aa10.78□□□□□ -0.68
PCDH9-205ENST00000614931 PPM1GO15355 546 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-205ENST00000614931 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-205ENST00000614931 HSP90AB2PQ58FF8 381 aa10.78□□□□□ -0.68
PCDH9-205ENST00000614931 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-205ENST00000614931 FAM208AQ9UK61 1670 aaKnown RBP10.77□□□□□ -0.69
PCDH9-205ENST00000614931 CSB-PGBD3P0DP91 1061 aa10.77□□□□□ -0.69
PCDH9-205ENST00000614931 HOXC9P31274 260 aa10.77□□□□□ -0.69
PCDH9-205ENST00000614931 DDB1Q16531 1140 aa10.77□□□□□ -0.69
PCDH9-205ENST00000614931 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
PCDH9-205ENST00000614931 DLG5Q8TDM6 1919 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 IL13P35225 146 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 AMPHP49418 695 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 EIF4A2Q14240 407 aaKnown RBP10.76□□□□□ -0.69
PCDH9-205ENST00000614931 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 CAMKK2Q96RR4 588 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 ERBB3P21860 1342 aa10.76□□□□□ -0.69
PCDH9-205ENST00000614931 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
PCDH9-205ENST00000614931 DIAPH1O60610 1272 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms