RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 SMC1AQ14683 1233 aaKnown RBP8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CAMK4Q16566 473 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CTNNBL1Q8WYA6 563 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CRACR2AQ9BSW2 395 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CDC45O75419 566 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 USP8P40818 1118 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 PDCP20941 246 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 DRC1Q96MC2 740 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
ALMS1-207ENST00000614410 CASQ1P31415 396 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 MBD3O95983 291 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 STRN4Q9NRL3 753 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 ZBED9Q6R2W3 1325 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 GSTTP1A0A1W2PQM5 241 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC158Q5M9N0 1113 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 GGNBP2Q9H3C7 697 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
ALMS1-207ENST00000614410 DDX23Q9BUQ8 820 aaKnown RBP8.38□□□□□ -1.07
ALMS1-207ENST00000614410 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-207ENST00000614410 TRMT1Q9NXH9 659 aaKnown RBP8.38□□□□□ -1.07
ALMS1-207ENST00000614410 ERLIN1O75477 346 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 SPECC1Q5M775 1068 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 NLRP2Q9NX02 1062 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 DACH1Q9UI36 760 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 URI1O94763 535 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-207ENST00000614410 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 AEBP2Q6ZN18 517 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-207ENST00000614410 ZNF397Q8NF99 534 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-207ENST00000614410 UBXN4Q92575 508 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 MACROD2A1Z1Q3 448 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 IFFO1Q0D2I5 559 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 ISM2Q6H9L7 571 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 STAMBPO95630 424 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 NOB1Q9ULX3 412 aaKnown RBP8.37□□□□□ -1.07
ALMS1-207ENST00000614410 CWC27Q6UX04 472 aaKnown RBP8.37□□□□□ -1.07
ALMS1-207ENST00000614410 TRIM22Q8IYM9 498 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 ANKRD30AQ9BXX3 1397 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 JAKMIP3Q5VZ66 844 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC148Q8NFR7 591 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
ALMS1-207ENST00000614410 KRT85P78386 507 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CEP57L1Q8IYX8 460 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
ALMS1-207ENST00000614410 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.36□□□□□ -1.07
ALMS1-207ENST00000614410 DESP17661 470 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
ALMS1-207ENST00000614410 BMP2KQ9NSY1 1161 aaPredicted RBP8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CYP46A1Q9Y6A2 500 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 COMMD10Q9Y6G5 202 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 TAF4BQ92750 862 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 ATF3P18847 181 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 JMYQ8N9B5 988 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC30Q5VVM6 783 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
ALMS1-207ENST00000614410 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 GNAI2P04899 355 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 PDZRN3Q9UPQ7 1066 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 UPF3BQ9BZI7 483 aaKnown RBP8.35□□□□□ -1.07
ALMS1-207ENST00000614410 MCM2P49736 904 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 CACNA2D4Q7Z3S7 1137 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 GNAI1P63096 354 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 ABTB2Q8N961 1025 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 SHTN1A0MZ66 631 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 TDO2P48775 406 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 CPLX3Q8WVH0 158 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 UBA5Q9GZZ9 404 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 PTPN14Q15678 1187 aa8.35□□□□□ -1.07
ALMS1-207ENST00000614410 ARHGAP29Q52LW3 1261 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 CABP2Q9NPB3 220 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 BCAR3O75815 825 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 IQCEQ6IPM2 695 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 SYCE3A1L190 88 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC160A6NGH7 325 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-207ENST00000614410 CBFA2T2O43439 604 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 CCDC57Q2TAC2 916 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 LARP1Q6PKG0 1096 aaKnown RBP8.34□□□□□ -1.07
ALMS1-207ENST00000614410 PRPF4BQ13523 1007 aaKnown RBP8.34□□□□□ -1.07
ALMS1-207ENST00000614410 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
ALMS1-207ENST00000614410 ABCF2Q9UG63 623 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 LIG1P18858 919 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 MTHFSP49914 203 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 HLTFQ14527 1009 aaKnown RBP eCLIP8.34□□□□□ -1.078e-7■■□□□ 12.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms