RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 KTN1Q86UP2 1357 aaKnown RBP25.44■■□□□ 1.66
SMN2-213ENST00000614240 PIK3C2AO00443 1686 aa25.43■■□□□ 1.66
SMN2-213ENST00000614240 CDCA7Q9BWT1 371 aaPredicted RBP25.43■■□□□ 1.66
SMN2-213ENST00000614240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.4■■□□□ 1.66
SMN2-213ENST00000614240 CARD10Q9BWT7 1032 aa25.39■■□□□ 1.66
SMN2-213ENST00000614240 CARD11Q9BXL7 1154 aa25.39■■□□□ 1.66
SMN2-213ENST00000614240 RREB1Q92766 1687 aa25.39■■□□□ 1.65
SMN2-213ENST00000614240 TMC1Q8TDI8 760 aa25.38■■□□□ 1.65
SMN2-213ENST00000614240 BCL11BQ9C0K0 894 aaPredicted RBP25.38■■□□□ 1.65
SMN2-213ENST00000614240 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
SMN2-213ENST00000614240 COL18A1P39060 1754 aa25.37■■□□□ 1.65
SMN2-213ENST00000614240 PLSCR1O15162 318 aa25.37■■□□□ 1.65
SMN2-213ENST00000614240 MARCH10Q8NA82 808 aaPredicted RBP25.37■■□□□ 1.65
SMN2-213ENST00000614240 PPP1R1BQ9UD71 204 aaPredicted RBP25.37■■□□□ 1.65
SMN2-213ENST00000614240 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
SMN2-213ENST00000614240 EXOC5O00471 708 aa25.36■■□□□ 1.65
SMN2-213ENST00000614240 SPON1Q9HCB6 807 aa25.36■■□□□ 1.65
SMN2-213ENST00000614240 AKAP12Q02952 1782 aa25.34■■□□□ 1.65
SMN2-213ENST00000614240 PTF1AQ7RTS3 328 aa25.34■■□□□ 1.65
SMN2-213ENST00000614240 HDGFL2Q7Z4V5 671 aaPredicted RBP25.33■■□□□ 1.65
SMN2-213ENST00000614240 PEAK1Q9H792 1746 aa25.33■■□□□ 1.65
SMN2-213ENST00000614240 KCNQ2O43526 872 aa25.32■■□□□ 1.64
SMN2-213ENST00000614240 NME9Q86XW9 330 aa25.32■■□□□ 1.64
SMN2-213ENST00000614240 CCDC7Q96M83 1385 aa25.31■■□□□ 1.64
SMN2-213ENST00000614240 SBNO2Q9Y2G9 1366 aa25.31■■□□□ 1.64
SMN2-213ENST00000614240 NLRP2Q9NX02 1062 aa25.3■■□□□ 1.64
SMN2-213ENST00000614240 NFAT5O94916 1531 aa25.3■■□□□ 1.64
SMN2-213ENST00000614240 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
SMN2-213ENST00000614240 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
SMN2-213ENST00000614240 TERF2IPQ9NYB0 399 aa25.28■■□□□ 1.64
SMN2-213ENST00000614240 USP31Q70CQ4 1352 aa25.28■■□□□ 1.64
SMN2-213ENST00000614240 BCL9O00512 1426 aa25.28■■□□□ 1.64
SMN2-213ENST00000614240 RGPD5Q99666 1765 aa25.27■■□□□ 1.64
SMN2-213ENST00000614240 DCAF8L1A6NGE4 600 aa25.26■■□□□ 1.63
SMN2-213ENST00000614240 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
SMN2-213ENST00000614240 PROM2Q8N271 834 aa25.25■■□□□ 1.63
SMN2-213ENST00000614240 SBF2Q86WG5 1849 aa25.25■■□□□ 1.63
SMN2-213ENST00000614240 WNK3Q9BYP7 1800 aa25.25■■□□□ 1.63
SMN2-213ENST00000614240 MON2Q7Z3U7 1717 aa25.24■■□□□ 1.63
SMN2-213ENST00000614240 ABCC6O95255 1503 aa25.24■■□□□ 1.63
SMN2-213ENST00000614240 STK32BQ9NY57 414 aa25.24■■□□□ 1.63
SMN2-213ENST00000614240 ERBB3P21860 1342 aa25.23■■□□□ 1.63
SMN2-213ENST00000614240 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
SMN2-213ENST00000614240 RGPD3A6NKT7 1758 aaPredicted RBP25.23■■□□□ 1.63
SMN2-213ENST00000614240 RGPD4Q7Z3J3 1758 aa25.23■■□□□ 1.63
SMN2-213ENST00000614240 CD163L1Q9NR16 1453 aa25.22■■□□□ 1.63
SMN2-213ENST00000614240 IL2RBP14784 551 aa25.22■■□□□ 1.63
SMN2-213ENST00000614240 ANKRD24Q8TF21 1146 aa25.22■■□□□ 1.63
SMN2-213ENST00000614240 TNS2Q63HR2 1409 aa25.21■■□□□ 1.63
SMN2-213ENST00000614240 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
SMN2-213ENST00000614240 ACSBG1Q96GR2 724 aa25.21■■□□□ 1.63
SMN2-213ENST00000614240 ZBTB7AO95365 584 aa25.19■■□□□ 1.62
SMN2-213ENST00000614240 PUS7Q96PZ0 661 aaKnown RBP25.19■■□□□ 1.62
SMN2-213ENST00000614240 NINLQ9Y2I6 1382 aa25.18■■□□□ 1.62
SMN2-213ENST00000614240 PDGFDQ9GZP0 370 aaPredicted RBP25.18■■□□□ 1.62
SMN2-213ENST00000614240 A0A1W2PP64 1363 aa25.18■■□□□ 1.62
SMN2-213ENST00000614240 YY1P25490 414 aa25.17■■□□□ 1.62
SMN2-213ENST00000614240 SLC15A2Q16348 729 aa25.16■■□□□ 1.62
SMN2-213ENST00000614240 LTV1Q96GA3 475 aaPredicted RBP25.15■■□□□ 1.62
SMN2-213ENST00000614240 ATF5Q9Y2D1 282 aaPredicted RBP25.15■■□□□ 1.62
SMN2-213ENST00000614240 ST20-MTHFSA0A0A6YYL1 179 aa25.14■■□□□ 1.62
SMN2-213ENST00000614240 USP54Q70EL1 1684 aa25.13■■□□□ 1.61
SMN2-213ENST00000614240 IP6K1Q92551 441 aa25.13■■□□□ 1.61
SMN2-213ENST00000614240 COG3Q96JB2 828 aa25.13■■□□□ 1.61
SMN2-213ENST00000614240 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
SMN2-213ENST00000614240 LTN1O94822 1766 aa25.12■■□□□ 1.61
SMN2-213ENST00000614240 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
SMN2-213ENST00000614240 TESK2Q96S53 571 aa25.1■■□□□ 1.61
SMN2-213ENST00000614240 CASZ1Q86V15 1759 aa25.09■■□□□ 1.61
SMN2-213ENST00000614240 AMPHP49418 695 aa25.09■■□□□ 1.61
SMN2-213ENST00000614240 NHSQ6T4R5 1651 aa25.07■■□□□ 1.6
SMN2-213ENST00000614240 PTGER2P43116 358 aa25.07■■□□□ 1.6
SMN2-213ENST00000614240 MTFR1LQ9H019 292 aa25.07■■□□□ 1.6
SMN2-213ENST00000614240 MAP3K19Q56UN5 1328 aa25.05■■□□□ 1.6
SMN2-213ENST00000614240 HOXC9P31274 260 aa25.04■■□□□ 1.6
SMN2-213ENST00000614240 FBLN1P23142 703 aa25.03■■□□□ 1.6
SMN2-213ENST00000614240 SYTL4Q96C24 671 aaPredicted RBP25.03■■□□□ 1.6
SMN2-213ENST00000614240 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.59
SMN2-213ENST00000614240 TMF1P82094 1093 aa25.01■■□□□ 1.59
SMN2-213ENST00000614240 FHDC1Q9C0D6 1143 aaPredicted RBP25.01■■□□□ 1.59
SMN2-213ENST00000614240 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
SMN2-213ENST00000614240 MYOM1P52179 1685 aa24.99■■□□□ 1.59
SMN2-213ENST00000614240 SYT17Q9BSW7 474 aa24.99■■□□□ 1.59
SMN2-213ENST00000614240 LRRC4BQ9NT99 713 aa24.99■■□□□ 1.59
SMN2-213ENST00000614240 BTAF1O14981 1849 aa24.98■■□□□ 1.59
SMN2-213ENST00000614240 PRIM1P49642 420 aaKnown RBP24.98■■□□□ 1.59
SMN2-213ENST00000614240 ZNF827Q17R98 1081 aa24.98■■□□□ 1.59
SMN2-213ENST00000614240 SLC27A3Q5K4L6 730 aa24.98■■□□□ 1.59
SMN2-213ENST00000614240 ZCRB1Q8TBF4 217 aaKnown RBP24.98■■□□□ 1.59
SMN2-213ENST00000614240 ARXQ96QS3 562 aa24.98■■□□□ 1.59
SMN2-213ENST00000614240 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
SMN2-213ENST00000614240 GGNBP2Q9H3C7 697 aa24.97■■□□□ 1.59
SMN2-213ENST00000614240 FAM208AQ9UK61 1670 aaKnown RBP24.96■■□□□ 1.59
SMN2-213ENST00000614240 FYB1O15117 783 aa24.95■■□□□ 1.58
SMN2-213ENST00000614240 SGIP1Q9BQI5 828 aa24.95■■□□□ 1.58
SMN2-213ENST00000614240 USP47Q96K76 1375 aa24.94■■□□□ 1.58
SMN2-213ENST00000614240 CDCA8Q53HL2 280 aa24.94■■□□□ 1.58
SMN2-213ENST00000614240 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
SMN2-213ENST00000614240 TRIM26Q12899 539 aaPredicted RBP24.93■■□□□ 1.58
SMN2-213ENST00000614240 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms