RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 NSD2O96028 1365 aa17.52■□□□□ 0.39
CCL4-201ENST00000613947 RXRBP28702 533 aa17.51■□□□□ 0.39
CCL4-201ENST00000613947 TNNT2P45379 298 aaPredicted RBP17.51■□□□□ 0.39
CCL4-201ENST00000613947 EVA1CP58658 441 aa17.51■□□□□ 0.39
CCL4-201ENST00000613947 VPS72Q15906 364 aa17.51■□□□□ 0.39
CCL4-201ENST00000613947 COL18A1P39060 1754 aa17.51■□□□□ 0.39
CCL4-201ENST00000613947 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
CCL4-201ENST00000613947 GJD4Q96KN9 370 aaPredicted RBP17.51■□□□□ 0.39
CCL4-201ENST00000613947 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
CCL4-201ENST00000613947 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
CCL4-201ENST00000613947 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
CCL4-201ENST00000613947 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
CCL4-201ENST00000613947 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
CCL4-201ENST00000613947 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
CCL4-201ENST00000613947 LTN1O94822 1766 aa17.5■□□□□ 0.39
CCL4-201ENST00000613947 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
CCL4-201ENST00000613947 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
CCL4-201ENST00000613947 COL5A2P05997 1499 aaPredicted RBP17.48■□□□□ 0.39
CCL4-201ENST00000613947 AMPHP49418 695 aa17.48■□□□□ 0.39
CCL4-201ENST00000613947 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
CCL4-201ENST00000613947 IP6K1Q92551 441 aa17.48■□□□□ 0.39
CCL4-201ENST00000613947 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 HOXC9P31274 260 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
CCL4-201ENST00000613947 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
CCL4-201ENST00000613947 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
CCL4-201ENST00000613947 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
CCL4-201ENST00000613947 ABCC6O95255 1503 aa17.45■□□□□ 0.38
CCL4-201ENST00000613947 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
CCL4-201ENST00000613947 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
CCL4-201ENST00000613947 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
CCL4-201ENST00000613947 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
CCL4-201ENST00000613947 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
CCL4-201ENST00000613947 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
CCL4-201ENST00000613947 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
CCL4-201ENST00000613947 ERBB3P21860 1342 aa17.44■□□□□ 0.38
CCL4-201ENST00000613947 GLI3P10071 1580 aa17.44■□□□□ 0.38
CCL4-201ENST00000613947 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
CCL4-201ENST00000613947 TOM1L2Q6ZVM7 507 aa17.43■□□□□ 0.38
CCL4-201ENST00000613947 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
CCL4-201ENST00000613947 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
CCL4-201ENST00000613947 MIER1Q8N108 512 aa17.43■□□□□ 0.38
CCL4-201ENST00000613947 FLT4P35916 1363 aa17.42■□□□□ 0.38
CCL4-201ENST00000613947 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
CCL4-201ENST00000613947 FAM98CQ17RN3 349 aaKnown RBP17.42■□□□□ 0.38
CCL4-201ENST00000613947 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CCL4-201ENST00000613947 CRB1P82279 1406 aa17.42■□□□□ 0.38
CCL4-201ENST00000613947 ONECUT3O60422 494 aaPredicted RBP17.4■□□□□ 0.38
CCL4-201ENST00000613947 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
CCL4-201ENST00000613947 INSRP06213 1382 aa17.4■□□□□ 0.38
CCL4-201ENST00000613947 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
CCL4-201ENST00000613947 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
CCL4-201ENST00000613947 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.37
CCL4-201ENST00000613947 RGS12O14924 1447 aa17.39■□□□□ 0.37
CCL4-201ENST00000613947 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
CCL4-201ENST00000613947 EP400Q96L91 3159 aa17.38■□□□□ 0.37
CCL4-201ENST00000613947 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
CCL4-201ENST00000613947 THRAP3Q9Y2W1 955 aaKnown RBP17.38■□□□□ 0.37
CCL4-201ENST00000613947 MTHFSP49914 203 aa17.37■□□□□ 0.37
CCL4-201ENST00000613947 A0A0G2JS52 829 aa17.36■□□□□ 0.37
CCL4-201ENST00000613947 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
CCL4-201ENST00000613947 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
CCL4-201ENST00000613947 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
CCL4-201ENST00000613947 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.37
CCL4-201ENST00000613947 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.37
CCL4-201ENST00000613947 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
CCL4-201ENST00000613947 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
CCL4-201ENST00000613947 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
CCL4-201ENST00000613947 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
CCL4-201ENST00000613947 THSD7AQ9UPZ6 1657 aa17.31■□□□□ 0.36
CCL4-201ENST00000613947 FAM208AQ9UK61 1670 aaKnown RBP17.31■□□□□ 0.36
CCL4-201ENST00000613947 EYA1Q99502 592 aa17.3■□□□□ 0.36
CCL4-201ENST00000613947 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
CCL4-201ENST00000613947 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
CCL4-201ENST00000613947 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
CCL4-201ENST00000613947 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
CCL4-201ENST00000613947 IL2RBP14784 551 aa17.29■□□□□ 0.36
CCL4-201ENST00000613947 RALBP1Q15311 655 aa17.29■□□□□ 0.36
CCL4-201ENST00000613947 IL13P35225 146 aa17.28■□□□□ 0.36
CCL4-201ENST00000613947 DDB1Q16531 1140 aa17.28■□□□□ 0.36
CCL4-201ENST00000613947 PDE3BQ13370 1112 aa17.27■□□□□ 0.35
CCL4-201ENST00000613947 FAM182BQ5T319 152 aa17.27■□□□□ 0.35
CCL4-201ENST00000613947 EXOC5O00471 708 aa17.26■□□□□ 0.35
CCL4-201ENST00000613947 PARP4Q9UKK3 1724 aaKnown RBP17.26■□□□□ 0.35
CCL4-201ENST00000613947 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
CCL4-201ENST00000613947 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CCL4-201ENST00000613947 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
CCL4-201ENST00000613947 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
CCL4-201ENST00000613947 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
CCL4-201ENST00000613947 MEGF6O75095 1541 aa17.24■□□□□ 0.35
CCL4-201ENST00000613947 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
CCL4-201ENST00000613947 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CCL4-201ENST00000613947 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
CCL4-201ENST00000613947 LRRC37A3O60309 1634 aa17.23■□□□□ 0.35
CCL4-201ENST00000613947 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
CCL4-201ENST00000613947 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
CCL4-201ENST00000613947 SOCS7O14512 581 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms