RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
SLIRP-212ENST00000613856 TMC1Q8TDI8 760 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
SLIRP-212ENST00000613856 PDGFDQ9GZP0 370 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-212ENST00000613856 SLC12A5Q9H2X9 1139 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 PEAK1Q9H792 1746 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 ANKRD26Q9UPS8 1709 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 CCDC61Q9Y6R9 512 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
SLIRP-212ENST00000613856 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
SLIRP-212ENST00000613856 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
SLIRP-212ENST00000613856 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
SLIRP-212ENST00000613856 UTRNP46939 3433 aa15.62■□□□□ 0.09
SLIRP-212ENST00000613856 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
SLIRP-212ENST00000613856 MIER1Q8N108 512 aa15.62■□□□□ 0.09
SLIRP-212ENST00000613856 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
SLIRP-212ENST00000613856 TERF2IPQ9NYB0 399 aa15.62■□□□□ 0.09
SLIRP-212ENST00000613856 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
SLIRP-212ENST00000613856 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 KCNQ2O43526 872 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 PDE3BQ13370 1112 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 BARGINQ6ZT62 677 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 CARD14Q9BXL6 1004 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-212ENST00000613856 CABP1Q9NZU7 370 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-212ENST00000613856 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
SLIRP-212ENST00000613856 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-212ENST00000613856 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-212ENST00000613856 SPON1Q9HCB6 807 aa15.59■□□□□ 0.09
SLIRP-212ENST00000613856 POLR3AO14802 1390 aaPredicted RBP15.59■□□□□ 0.09
SLIRP-212ENST00000613856 NSD2O96028 1365 aa15.59■□□□□ 0.09
SLIRP-212ENST00000613856 EDC4Q6P2E9 1401 aaKnown RBP15.59■□□□□ 0.09
SLIRP-212ENST00000613856 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
SLIRP-212ENST00000613856 RGPD3A6NKT7 1758 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-212ENST00000613856 RGPD4Q7Z3J3 1758 aa15.57■□□□□ 0.08
SLIRP-212ENST00000613856 EVA1CP58658 441 aa15.57■□□□□ 0.08
SLIRP-212ENST00000613856 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
SLIRP-212ENST00000613856 COL5A2P05997 1499 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-212ENST00000613856 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
SLIRP-212ENST00000613856 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
SLIRP-212ENST00000613856 RALBP1Q15311 655 aa15.56■□□□□ 0.08
SLIRP-212ENST00000613856 CGNL1Q0VF96 1302 aa15.56■□□□□ 0.08
SLIRP-212ENST00000613856 USP6P35125 1406 aa15.56■□□□□ 0.08
SLIRP-212ENST00000613856 USP54Q70EL1 1684 aa15.55■□□□□ 0.08
SLIRP-212ENST00000613856 ACEP12821 1306 aa15.55■□□□□ 0.08
SLIRP-212ENST00000613856 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-212ENST00000613856 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-212ENST00000613856 USP19O94966 1318 aa15.54■□□□□ 0.08
SLIRP-212ENST00000613856 ZBTB7AO95365 584 aa15.54■□□□□ 0.08
SLIRP-212ENST00000613856 CPDO75976 1380 aa15.53■□□□□ 0.08
SLIRP-212ENST00000613856 PROM2Q8N271 834 aa15.53■□□□□ 0.08
SLIRP-212ENST00000613856 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
SLIRP-212ENST00000613856 ABTB2Q8N961 1025 aa15.52■□□□□ 0.08
SLIRP-212ENST00000613856 ZNF784Q8NCA9 323 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-212ENST00000613856 COL18A1P39060 1754 aa15.52■□□□□ 0.07
SLIRP-212ENST00000613856 OVOS2A0A0G2JMS6 1433 aa15.51■□□□□ 0.07
SLIRP-212ENST00000613856 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
SLIRP-212ENST00000613856 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
SLIRP-212ENST00000613856 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
SLIRP-212ENST00000613856 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
SLIRP-212ENST00000613856 PTGER2P43116 358 aa15.51■□□□□ 0.07
SLIRP-212ENST00000613856 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
SLIRP-212ENST00000613856 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-212ENST00000613856 PIK3C2AO00443 1686 aa15.5■□□□□ 0.07
SLIRP-212ENST00000613856 CRB1P82279 1406 aa15.5■□□□□ 0.07
SLIRP-212ENST00000613856 CHD4Q14839 1912 aa15.49■□□□□ 0.07
SLIRP-212ENST00000613856 GCP02774 474 aa15.49■□□□□ 0.07
SLIRP-212ENST00000613856 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
SLIRP-212ENST00000613856 THRAP3Q9Y2W1 955 aaKnown RBP15.48■□□□□ 0.07
SLIRP-212ENST00000613856 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
SLIRP-212ENST00000613856 FYB1O15117 783 aa15.47■□□□□ 0.07
SLIRP-212ENST00000613856 PLSCR1O15162 318 aa15.46■□□□□ 0.07
SLIRP-212ENST00000613856 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
SLIRP-212ENST00000613856 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-212ENST00000613856 FHDC1Q9C0D6 1143 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-212ENST00000613856 SLIT3O75094 1523 aa15.46■□□□□ 0.07
SLIRP-212ENST00000613856 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
SLIRP-212ENST00000613856 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-212ENST00000613856 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 DDB1Q16531 1140 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 SYT17Q9BSW7 474 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 USP31Q70CQ4 1352 aa15.44■□□□□ 0.06
SLIRP-212ENST00000613856 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
SLIRP-212ENST00000613856 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
SLIRP-212ENST00000613856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
SLIRP-212ENST00000613856 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
SLIRP-212ENST00000613856 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
SLIRP-212ENST00000613856 NME9Q86XW9 330 aa15.42■□□□□ 0.06
SLIRP-212ENST00000613856 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
SLIRP-212ENST00000613856 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
SLIRP-212ENST00000613856 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
SLIRP-212ENST00000613856 AATKQ6ZMQ8 1374 aa15.41■□□□□ 0.06
SLIRP-212ENST00000613856 TXNRD1Q16881 649 aa15.41■□□□□ 0.06
SLIRP-212ENST00000613856 PAPPAQ13219 1627 aa15.41■□□□□ 0.06
SLIRP-212ENST00000613856 GOLGB1Q14789 3259 aaKnown RBP15.41■□□□□ 0.06
SLIRP-212ENST00000613856 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
SLIRP-212ENST00000613856 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms