RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 ARHGEF25Q86VW2 580 aa26.92■■□□□ 1.9
CPNE9-205ENST00000613455 CABLES1Q8TDN4 633 aa26.9■■□□□ 1.9
CPNE9-205ENST00000613455 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
CPNE9-205ENST00000613455 CERKQ8TCT0 537 aa26.9■■□□□ 1.9
CPNE9-205ENST00000613455 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.9
CPNE9-205ENST00000613455 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
CPNE9-205ENST00000613455 IP6K1Q92551 441 aa26.88■■□□□ 1.89
CPNE9-205ENST00000613455 PIP4K2BP78356 416 aa26.87■■□□□ 1.89
CPNE9-205ENST00000613455 RUNDC1Q96C34 613 aa26.87■■□□□ 1.89
CPNE9-205ENST00000613455 PLEKHF1Q96S99 279 aa26.86■■□□□ 1.89
CPNE9-205ENST00000613455 COL18A1P39060 1754 aa26.85■■□□□ 1.89
CPNE9-205ENST00000613455 ZC3H6P61129 1189 aaKnown RBP26.85■■□□□ 1.89
CPNE9-205ENST00000613455 RSPH6AQ9H0K4 717 aa26.85■■□□□ 1.89
CPNE9-205ENST00000613455 COL22A1Q8NFW1 1626 aaPredicted RBP26.85■■□□□ 1.89
CPNE9-205ENST00000613455 RGPD5Q99666 1765 aa26.84■■□□□ 1.89
CPNE9-205ENST00000613455 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
CPNE9-205ENST00000613455 APAF1O14727 1248 aa26.84■■□□□ 1.89
CPNE9-205ENST00000613455 LRRC59Q96AG4 307 aaKnown RBP26.84■■□□□ 1.89
CPNE9-205ENST00000613455 CPDO75976 1380 aa26.83■■□□□ 1.89
CPNE9-205ENST00000613455 ABCC6O95255 1503 aa26.83■■□□□ 1.89
CPNE9-205ENST00000613455 FCHSD2O94868 740 aa26.83■■□□□ 1.89
CPNE9-205ENST00000613455 HMOX1P09601 288 aa26.82■■□□□ 1.88
CPNE9-205ENST00000613455 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
CPNE9-205ENST00000613455 KIAA0232Q92628 1395 aa26.81■■□□□ 1.88
CPNE9-205ENST00000613455 TCP11L2Q8N4U5 519 aa26.79■■□□□ 1.88
CPNE9-205ENST00000613455 IGSF1Q8N6C5 1336 aa26.79■■□□□ 1.88
CPNE9-205ENST00000613455 PRKAR2BP31323 418 aa26.79■■□□□ 1.88
CPNE9-205ENST00000613455 AEBP1Q8IUX7 1158 aa26.79■■□□□ 1.88
CPNE9-205ENST00000613455 AXIN2Q9Y2T1 843 aa26.79■■□□□ 1.88
CPNE9-205ENST00000613455 EYA1Q99502 592 aa26.78■■□□□ 1.88
CPNE9-205ENST00000613455 RGPD2P0DJD1 1756 aa26.77■■□□□ 1.88
CPNE9-205ENST00000613455 SULT6B1Q6IMI4 303 aa26.77■■□□□ 1.88
CPNE9-205ENST00000613455 LTV1Q96GA3 475 aaPredicted RBP26.77■■□□□ 1.88
CPNE9-205ENST00000613455 PNNQ9H307 717 aaKnown RBP26.77■■□□□ 1.88
CPNE9-205ENST00000613455 KDRP35968 1356 aa26.77■■□□□ 1.88
CPNE9-205ENST00000613455 LMO7Q8WWI1 1683 aa26.76■■□□□ 1.87
CPNE9-205ENST00000613455 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
CPNE9-205ENST00000613455 CAMTA1Q9Y6Y1 1673 aa26.75■■□□□ 1.87
CPNE9-205ENST00000613455 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
CPNE9-205ENST00000613455 CHRNA2Q15822 529 aa26.73■■□□□ 1.87
CPNE9-205ENST00000613455 NGEFQ8N5V2 710 aa26.73■■□□□ 1.87
CPNE9-205ENST00000613455 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
CPNE9-205ENST00000613455 ANKRD24Q8TF21 1146 aa26.73■■□□□ 1.87
CPNE9-205ENST00000613455 ERBB3P21860 1342 aa26.72■■□□□ 1.87
CPNE9-205ENST00000613455 HAP1P54257 671 aaPredicted RBP26.72■■□□□ 1.87
CPNE9-205ENST00000613455 PHACTR3Q96KR7 559 aa26.72■■□□□ 1.87
CPNE9-205ENST00000613455 NCAPD2Q15021 1401 aa26.71■■□□□ 1.87
CPNE9-205ENST00000613455 TMPOP42166 694 aaKnown RBP26.7■■□□□ 1.87
CPNE9-205ENST00000613455 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.87
CPNE9-205ENST00000613455 PRDM11Q9NQV5 511 aa26.7■■□□□ 1.87
CPNE9-205ENST00000613455 NCBP3Q53F19 620 aaKnown RBP26.7■■□□□ 1.86
CPNE9-205ENST00000613455 NBPF6Q5VWK0 638 aa26.7■■□□□ 1.86
CPNE9-205ENST00000613455 NBPF4Q96M43 638 aa26.7■■□□□ 1.86
CPNE9-205ENST00000613455 FAM208AQ9UK61 1670 aaKnown RBP26.7■■□□□ 1.86
CPNE9-205ENST00000613455 NEUROD2Q15784 382 aa26.69■■□□□ 1.86
CPNE9-205ENST00000613455 PDE3BQ13370 1112 aa26.68■■□□□ 1.86
CPNE9-205ENST00000613455 CCDC27Q2M243 656 aa26.68■■□□□ 1.86
CPNE9-205ENST00000613455 DLG5Q8TDM6 1919 aa26.67■■□□□ 1.86
CPNE9-205ENST00000613455 NEFMP07197 916 aa26.67■■□□□ 1.86
CPNE9-205ENST00000613455 WWC1Q8IX03 1113 aa26.67■■□□□ 1.86
CPNE9-205ENST00000613455 USHBP1Q8N6Y0 703 aa26.67■■□□□ 1.86
CPNE9-205ENST00000613455 NFE2L2Q16236 605 aa26.65■■□□□ 1.86
CPNE9-205ENST00000613455 CDCA7LQ96GN5 454 aa26.65■■□□□ 1.86
CPNE9-205ENST00000613455 COL5A2P05997 1499 aaPredicted RBP26.64■■□□□ 1.86
CPNE9-205ENST00000613455 COL14A1Q05707 1796 aaKnown RBP26.64■■□□□ 1.85
CPNE9-205ENST00000613455 FAM83GA6ND36 823 aa26.62■■□□□ 1.85
CPNE9-205ENST00000613455 TRIM35Q9UPQ4 493 aa26.62■■□□□ 1.85
CPNE9-205ENST00000613455 RIPK4P57078 832 aa26.62■■□□□ 1.85
CPNE9-205ENST00000613455 GOLGA2Q08379 1002 aa26.6■■□□□ 1.85
CPNE9-205ENST00000613455 JCADQ9P266 1359 aa26.59■■□□□ 1.85
CPNE9-205ENST00000613455 SPINK5Q9NQ38 1064 aaPredicted RBP26.58■■□□□ 1.85
CPNE9-205ENST00000613455 WDR17Q8IZU2 1322 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 CSB-PGBD3P0DP91 1061 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 WDR63Q8IWG1 891 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 NLRP2Q9NX02 1062 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 PLCH1Q4KWH8 1693 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 SLFN5Q08AF3 891 aa26.56■■□□□ 1.84
CPNE9-205ENST00000613455 MTHFSDQ2M296 383 aaKnown RBP26.56■■□□□ 1.84
CPNE9-205ENST00000613455 TRMT2AQ8IZ69 625 aaKnown RBP26.53■■□□□ 1.84
CPNE9-205ENST00000613455 HSPA1LP34931 641 aa26.53■■□□□ 1.84
CPNE9-205ENST00000613455 DUSP27Q5VZP5 1158 aa26.53■■□□□ 1.84
CPNE9-205ENST00000613455 E9PSI1 815 aa26.52■■□□□ 1.84
CPNE9-205ENST00000613455 ADAMTS2O95450 1211 aa26.51■■□□□ 1.83
CPNE9-205ENST00000613455 GAS2L2Q8NHY3 880 aa26.51■■□□□ 1.83
CPNE9-205ENST00000613455 BTG4Q9NY30 223 aa26.51■■□□□ 1.83
CPNE9-205ENST00000613455 NRAPQ86VF7 1730 aa26.51■■□□□ 1.83
CPNE9-205ENST00000613455 NUTM2BA6NNL0 878 aaPredicted RBP26.51■■□□□ 1.83
CPNE9-205ENST00000613455 NUTM2EB1AL46 878 aaPredicted RBP26.51■■□□□ 1.83
CPNE9-205ENST00000613455 LMOD3Q0VAK6 560 aa26.51■■□□□ 1.83
CPNE9-205ENST00000613455 NUTM2AQ8IVF1 878 aaPredicted RBP26.51■■□□□ 1.83
CPNE9-205ENST00000613455 MEGF6O75095 1541 aa26.5■■□□□ 1.83
CPNE9-205ENST00000613455 STRN4Q9NRL3 753 aa26.49■■□□□ 1.83
CPNE9-205ENST00000613455 LARP1Q6PKG0 1096 aaKnown RBP26.48■■□□□ 1.83
CPNE9-205ENST00000613455 THUMPD2Q9BTF0 503 aaKnown RBP26.48■■□□□ 1.83
CPNE9-205ENST00000613455 IL16Q14005 1332 aa26.48■■□□□ 1.83
CPNE9-205ENST00000613455 TOM1L2Q6ZVM7 507 aa26.48■■□□□ 1.83
CPNE9-205ENST00000613455 NWD2Q9ULI1 1742 aa26.47■■□□□ 1.83
CPNE9-205ENST00000613455 LRP6O75581 1613 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 PLEKHG2Q9H7P9 1386 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 EVA1CP58658 441 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms