RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 CCDC9Q9Y3X0 531 aaKnown RBP22.77■■□□□ 1.24
IRF1-211ENST00000613424 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
IRF1-211ENST00000613424 RRS1Q15050 365 aaKnown RBP22.74■■□□□ 1.23
IRF1-211ENST00000613424 MAP3K19Q56UN5 1328 aa22.74■■□□□ 1.23
IRF1-211ENST00000613424 NSD2O96028 1365 aa22.74■■□□□ 1.23
IRF1-211ENST00000613424 LTN1O94822 1766 aa22.73■■□□□ 1.23
IRF1-211ENST00000613424 LARP1Q6PKG0 1096 aaKnown RBP22.73■■□□□ 1.23
IRF1-211ENST00000613424 IP6K1Q92551 441 aa22.72■■□□□ 1.23
IRF1-211ENST00000613424 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
IRF1-211ENST00000613424 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
IRF1-211ENST00000613424 COL5A2P05997 1499 aaPredicted RBP22.72■■□□□ 1.23
IRF1-211ENST00000613424 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
IRF1-211ENST00000613424 AMPHP49418 695 aa22.71■■□□□ 1.23
IRF1-211ENST00000613424 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
IRF1-211ENST00000613424 TNNT2P45379 298 aaPredicted RBP22.7■■□□□ 1.22
IRF1-211ENST00000613424 ABCC6O95255 1503 aa22.7■■□□□ 1.22
IRF1-211ENST00000613424 ANKRD26Q9UPS8 1709 aa22.7■■□□□ 1.22
IRF1-211ENST00000613424 GLI3P10071 1580 aa22.69■■□□□ 1.22
IRF1-211ENST00000613424 SPATA31A1Q5TZJ5 1347 aa22.69■■□□□ 1.22
IRF1-211ENST00000613424 HOXC9P31274 260 aa22.68■■□□□ 1.22
IRF1-211ENST00000613424 CC2D1BQ5T0F9 858 aaKnown RBP22.68■■□□□ 1.22
IRF1-211ENST00000613424 WDR17Q8IZU2 1322 aa22.67■■□□□ 1.22
IRF1-211ENST00000613424 CSB-PGBD3P0DP91 1061 aa22.67■■□□□ 1.22
IRF1-211ENST00000613424 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
IRF1-211ENST00000613424 EMILIN1Q9Y6C2 1016 aa22.67■■□□□ 1.22
IRF1-211ENST00000613424 CDK12Q9NYV4 1490 aaPredicted RBP22.66■■□□□ 1.22
IRF1-211ENST00000613424 ONECUT3O60422 494 aaPredicted RBP22.66■■□□□ 1.22
IRF1-211ENST00000613424 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
IRF1-211ENST00000613424 CNGB1Q14028 1251 aaPredicted RBP22.66■■□□□ 1.22
IRF1-211ENST00000613424 TOM1L2Q6ZVM7 507 aa22.66■■□□□ 1.22
IRF1-211ENST00000613424 ANKRD24Q8TF21 1146 aa22.66■■□□□ 1.22
IRF1-211ENST00000613424 POLKQ9UBT6 870 aa22.66■■□□□ 1.22
IRF1-211ENST00000613424 BLMP54132 1417 aaPredicted RBP22.65■■□□□ 1.22
IRF1-211ENST00000613424 NPC1L1Q9UHC9 1359 aa22.65■■□□□ 1.22
IRF1-211ENST00000613424 FAM98CQ17RN3 349 aaKnown RBP22.65■■□□□ 1.22
IRF1-211ENST00000613424 MAP2P11137 1827 aaKnown RBP22.65■■□□□ 1.22
IRF1-211ENST00000613424 RGS12O14924 1447 aa22.65■■□□□ 1.22
IRF1-211ENST00000613424 CRB1P82279 1406 aa22.65■■□□□ 1.22
IRF1-211ENST00000613424 ERBB3P21860 1342 aa22.64■■□□□ 1.22
IRF1-211ENST00000613424 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
IRF1-211ENST00000613424 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
IRF1-211ENST00000613424 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
IRF1-211ENST00000613424 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
IRF1-211ENST00000613424 HSP90AB2PQ58FF8 381 aa22.63■■□□□ 1.21
IRF1-211ENST00000613424 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
IRF1-211ENST00000613424 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
IRF1-211ENST00000613424 SEPT12Q8IYM1 358 aa22.62■■□□□ 1.21
IRF1-211ENST00000613424 CARD10Q9BWT7 1032 aa22.62■■□□□ 1.21
IRF1-211ENST00000613424 THRAP3Q9Y2W1 955 aaKnown RBP22.62■■□□□ 1.21
IRF1-211ENST00000613424 PEAK1Q9H792 1746 aa22.62■■□□□ 1.21
IRF1-211ENST00000613424 FLT4P35916 1363 aa22.62■■□□□ 1.21
IRF1-211ENST00000613424 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
IRF1-211ENST00000613424 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
IRF1-211ENST00000613424 INSRP06213 1382 aa22.6■■□□□ 1.21
IRF1-211ENST00000613424 A0A0G2JS52 829 aa22.58■■□□□ 1.21
IRF1-211ENST00000613424 MYT1Q01538 1121 aa22.58■■□□□ 1.21
IRF1-211ENST00000613424 SMG6Q86US8 1419 aaKnown RBP22.54■■□□□ 1.2
IRF1-211ENST00000613424 MTHFSP49914 203 aa22.53■■□□□ 1.2
IRF1-211ENST00000613424 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
IRF1-211ENST00000613424 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
IRF1-211ENST00000613424 THSD7AQ9UPZ6 1657 aa22.52■■□□□ 1.2
IRF1-211ENST00000613424 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
IRF1-211ENST00000613424 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
IRF1-211ENST00000613424 FAM208AQ9UK61 1670 aaKnown RBP22.51■■□□□ 1.19
IRF1-211ENST00000613424 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
IRF1-211ENST00000613424 EIF4A2Q14240 407 aaKnown RBP22.5■■□□□ 1.19
IRF1-211ENST00000613424 CDCA7Q9BWT1 371 aaPredicted RBP22.5■■□□□ 1.19
IRF1-211ENST00000613424 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
IRF1-211ENST00000613424 SOCS7O14512 581 aa22.48■■□□□ 1.19
IRF1-211ENST00000613424 IL2RBP14784 551 aa22.48■■□□□ 1.19
IRF1-211ENST00000613424 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
IRF1-211ENST00000613424 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
IRF1-211ENST00000613424 EYA1Q99502 592 aa22.47■■□□□ 1.19
IRF1-211ENST00000613424 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
IRF1-211ENST00000613424 DDB1Q16531 1140 aa22.46■■□□□ 1.19
IRF1-211ENST00000613424 PARP4Q9UKK3 1724 aaKnown RBP22.45■■□□□ 1.19
IRF1-211ENST00000613424 EXOC5O00471 708 aa22.45■■□□□ 1.18
IRF1-211ENST00000613424 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
IRF1-211ENST00000613424 WNK3Q9BYP7 1800 aa22.45■■□□□ 1.18
IRF1-211ENST00000613424 FAM182BQ5T319 152 aa22.44■■□□□ 1.18
IRF1-211ENST00000613424 IL13P35225 146 aa22.43■■□□□ 1.18
IRF1-211ENST00000613424 RALBP1Q15311 655 aa22.42■■□□□ 1.18
IRF1-211ENST00000613424 LRRC37A3O60309 1634 aa22.4■■□□□ 1.18
IRF1-211ENST00000613424 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
IRF1-211ENST00000613424 RAPGEF4Q8WZA2 1011 aa22.4■■□□□ 1.18
IRF1-211ENST00000613424 UPF1Q92900 1129 aaKnown RBP eCLIP22.4■■□□□ 1.18
IRF1-211ENST00000613424 EP400Q96L91 3159 aa22.4■■□□□ 1.18
IRF1-211ENST00000613424 NCAPD2Q15021 1401 aa22.4■■□□□ 1.18
IRF1-211ENST00000613424 IGSF1Q8N6C5 1336 aa22.39■■□□□ 1.18
IRF1-211ENST00000613424 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.17
IRF1-211ENST00000613424 MARCH10Q8NA82 808 aaPredicted RBP22.39■■□□□ 1.17
IRF1-211ENST00000613424 MEGF6O75095 1541 aa22.38■■□□□ 1.17
IRF1-211ENST00000613424 FAM196AQ6ZSG2 479 aa22.37■■□□□ 1.17
IRF1-211ENST00000613424 ZCRB1Q8TBF4 217 aaKnown RBP22.37■■□□□ 1.17
IRF1-211ENST00000613424 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
IRF1-211ENST00000613424 TNS2Q63HR2 1409 aa22.37■■□□□ 1.17
IRF1-211ENST00000613424 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
IRF1-211ENST00000613424 OVOS2A0A0G2JMS6 1433 aa22.35■■□□□ 1.17
IRF1-211ENST00000613424 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
IRF1-211ENST00000613424 SULT6B1Q6IMI4 303 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms