RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SOX12O15370 315 aa25.52■■□□□ 1.68
VCX3A-203ENST00000612369 CDCA8Q53HL2 280 aa25.52■■□□□ 1.68
VCX3A-203ENST00000612369 ZRANB1Q9UGI0 708 aa25.52■■□□□ 1.68
VCX3A-203ENST00000612369 AXIN2Q9Y2T1 843 aa25.52■■□□□ 1.68
VCX3A-203ENST00000612369 ABCC6O95255 1503 aa25.52■■□□□ 1.68
VCX3A-203ENST00000612369 PDE3BQ13370 1112 aa25.51■■□□□ 1.67
VCX3A-203ENST00000612369 WDR17Q8IZU2 1322 aa25.51■■□□□ 1.67
VCX3A-203ENST00000612369 FAM196AQ6ZSG2 479 aa25.5■■□□□ 1.67
VCX3A-203ENST00000612369 TOM1L2Q6ZVM7 507 aa25.5■■□□□ 1.67
VCX3A-203ENST00000612369 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
VCX3A-203ENST00000612369 BAG6P46379 1132 aa25.49■■□□□ 1.67
VCX3A-203ENST00000612369 FAM182BQ5T319 152 aa25.49■■□□□ 1.67
VCX3A-203ENST00000612369 DEFB132Q7Z7B7 95 aa25.49■■□□□ 1.67
VCX3A-203ENST00000612369 ANKRD36BQ8N2N9 1353 aa25.47■■□□□ 1.67
VCX3A-203ENST00000612369 RGPD1P0DJD0 1748 aa25.47■■□□□ 1.67
VCX3A-203ENST00000612369 PARP4Q9UKK3 1724 aaKnown RBP25.46■■□□□ 1.67
VCX3A-203ENST00000612369 OVOS2A0A0J9YW53 1432 aa25.46■■□□□ 1.67
VCX3A-203ENST00000612369 OVOS2Q6IE36 1432 aa25.46■■□□□ 1.67
VCX3A-203ENST00000612369 C11orf95C9JLR9 678 aaPredicted RBP25.45■■□□□ 1.66
VCX3A-203ENST00000612369 CDCA7Q9BWT1 371 aaPredicted RBP25.45■■□□□ 1.66
VCX3A-203ENST00000612369 CSB-PGBD3P0DP91 1061 aa25.44■■□□□ 1.66
VCX3A-203ENST00000612369 CARD10Q9BWT7 1032 aa25.44■■□□□ 1.66
VCX3A-203ENST00000612369 RGPD5Q99666 1765 aa25.44■■□□□ 1.66
VCX3A-203ENST00000612369 DISP2A7MBM2 1401 aa25.42■■□□□ 1.66
VCX3A-203ENST00000612369 COG3Q96JB2 828 aa25.41■■□□□ 1.66
VCX3A-203ENST00000612369 DDB1Q16531 1140 aa25.4■■□□□ 1.66
VCX3A-203ENST00000612369 LTN1O94822 1766 aa25.4■■□□□ 1.66
VCX3A-203ENST00000612369 CCDC7Q96M83 1385 aa25.4■■□□□ 1.66
VCX3A-203ENST00000612369 TNS1Q9HBL0 1735 aaKnown RBP25.38■■□□□ 1.65
VCX3A-203ENST00000612369 TRIM37O94972 964 aa25.38■■□□□ 1.65
VCX3A-203ENST00000612369 ERBB3P21860 1342 aa25.37■■□□□ 1.65
VCX3A-203ENST00000612369 EN1Q05925 392 aaPredicted RBP25.37■■□□□ 1.65
VCX3A-203ENST00000612369 WNK3Q9BYP7 1800 aa25.36■■□□□ 1.65
VCX3A-203ENST00000612369 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
VCX3A-203ENST00000612369 OVOS2A0A0G2JMS6 1433 aa25.35■■□□□ 1.65
VCX3A-203ENST00000612369 IP6K1Q92551 441 aa25.34■■□□□ 1.65
VCX3A-203ENST00000612369 FYB1O15117 783 aa25.33■■□□□ 1.65
VCX3A-203ENST00000612369 ANKRD24Q8TF21 1146 aa25.33■■□□□ 1.65
VCX3A-203ENST00000612369 PARD3Q8TEW0 1356 aa25.32■■□□□ 1.64
VCX3A-203ENST00000612369 APBA3O96018 575 aa25.32■■□□□ 1.64
VCX3A-203ENST00000612369 EIF4G2P78344 907 aaKnown RBP eCLIP25.32■■□□□ 1.64
VCX3A-203ENST00000612369 NLRP2Q9NX02 1062 aa25.32■■□□□ 1.64
VCX3A-203ENST00000612369 EXOC5O00471 708 aa25.31■■□□□ 1.64
VCX3A-203ENST00000612369 CAMKK2Q96RR4 588 aa25.31■■□□□ 1.64
VCX3A-203ENST00000612369 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
VCX3A-203ENST00000612369 BCL9O00512 1426 aa25.29■■□□□ 1.64
VCX3A-203ENST00000612369 EZH2Q15910 746 aaKnown RBP25.29■■□□□ 1.64
VCX3A-203ENST00000612369 MYOM1P52179 1685 aa25.29■■□□□ 1.64
VCX3A-203ENST00000612369 GGNBP2Q9H3C7 697 aa25.28■■□□□ 1.64
VCX3A-203ENST00000612369 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
VCX3A-203ENST00000612369 AMPHP49418 695 aa25.27■■□□□ 1.64
VCX3A-203ENST00000612369 MARCH10Q8NA82 808 aaPredicted RBP25.27■■□□□ 1.64
VCX3A-203ENST00000612369 IL2RBP14784 551 aa25.26■■□□□ 1.63
VCX3A-203ENST00000612369 HOXC9P31274 260 aa25.26■■□□□ 1.63
VCX3A-203ENST00000612369 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
VCX3A-203ENST00000612369 CARD14Q9BXL6 1004 aa25.25■■□□□ 1.63
VCX3A-203ENST00000612369 RTL1A6NKG5 1358 aa25.25■■□□□ 1.63
VCX3A-203ENST00000612369 TNS2Q63HR2 1409 aa25.25■■□□□ 1.63
VCX3A-203ENST00000612369 FAM208AQ9UK61 1670 aaKnown RBP25.25■■□□□ 1.63
VCX3A-203ENST00000612369 KIF20BQ96Q89 1820 aa25.24■■□□□ 1.63
VCX3A-203ENST00000612369 SBF2Q86WG5 1849 aa25.23■■□□□ 1.63
VCX3A-203ENST00000612369 BCL11BQ9C0K0 894 aaPredicted RBP25.23■■□□□ 1.63
VCX3A-203ENST00000612369 SRCAPQ6ZRS2 3230 aa25.23■■□□□ 1.63
VCX3A-203ENST00000612369 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
VCX3A-203ENST00000612369 FBLN1P23142 703 aa25.22■■□□□ 1.63
VCX3A-203ENST00000612369 LTV1Q96GA3 475 aaPredicted RBP25.21■■□□□ 1.63
VCX3A-203ENST00000612369 KIF24Q5T7B8 1368 aa25.2■■□□□ 1.63
VCX3A-203ENST00000612369 PLSCR1O15162 318 aa25.2■■□□□ 1.62
VCX3A-203ENST00000612369 RRS1Q15050 365 aaKnown RBP25.19■■□□□ 1.62
VCX3A-203ENST00000612369 RREB1Q92766 1687 aa25.19■■□□□ 1.62
VCX3A-203ENST00000612369 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
VCX3A-203ENST00000612369 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
VCX3A-203ENST00000612369 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
VCX3A-203ENST00000612369 RGPD3A6NKT7 1758 aaPredicted RBP25.17■■□□□ 1.62
VCX3A-203ENST00000612369 RGPD4Q7Z3J3 1758 aa25.17■■□□□ 1.62
VCX3A-203ENST00000612369 NBPF14Q5TI25 921 aa25.16■■□□□ 1.62
VCX3A-203ENST00000612369 SMG6Q86US8 1419 aaKnown RBP25.15■■□□□ 1.62
VCX3A-203ENST00000612369 R3HDM1Q15032 1099 aaKnown RBP25.15■■□□□ 1.62
VCX3A-203ENST00000612369 INSRP06213 1382 aa25.14■■□□□ 1.61
VCX3A-203ENST00000612369 FLT4P35916 1363 aa25.14■■□□□ 1.61
VCX3A-203ENST00000612369 NUP188Q5SRE5 1749 aa25.13■■□□□ 1.61
VCX3A-203ENST00000612369 HSP90AB2PQ58FF8 381 aa25.11■■□□□ 1.61
VCX3A-203ENST00000612369 PTF1AQ7RTS3 328 aa25.11■■□□□ 1.61
VCX3A-203ENST00000612369 NBPF6Q5VWK0 638 aa25.1■■□□□ 1.61
VCX3A-203ENST00000612369 NBPF4Q96M43 638 aa25.1■■□□□ 1.61
VCX3A-203ENST00000612369 LRP5O75197 1615 aa25.09■■□□□ 1.61
VCX3A-203ENST00000612369 RGPD2P0DJD1 1756 aa25.08■■□□□ 1.61
VCX3A-203ENST00000612369 NHSQ6T4R5 1651 aa25.08■■□□□ 1.61
VCX3A-203ENST00000612369 PANK3Q9H999 370 aa25.08■■□□□ 1.61
VCX3A-203ENST00000612369 KCNQ2O43526 872 aa25.07■■□□□ 1.6
VCX3A-203ENST00000612369 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
VCX3A-203ENST00000612369 ZCRB1Q8TBF4 217 aaKnown RBP25.06■■□□□ 1.6
VCX3A-203ENST00000612369 DDX54Q8TDD1 881 aaKnown RBP25.06■■□□□ 1.6
VCX3A-203ENST00000612369 RAPGEF4Q8WZA2 1011 aa25.05■■□□□ 1.6
VCX3A-203ENST00000612369 ACSBG1Q96GR2 724 aa25.05■■□□□ 1.6
VCX3A-203ENST00000612369 PROM2Q8N271 834 aa25.04■■□□□ 1.6
VCX3A-203ENST00000612369 WASHC2AQ641Q2 1341 aa25.04■■□□□ 1.6
VCX3A-203ENST00000612369 NSD2O96028 1365 aa25.04■■□□□ 1.6
VCX3A-203ENST00000612369 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
VCX3A-203ENST00000612369 MEGF6O75095 1541 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms