RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
PTCHD3P1-201ENST00000612350 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
PTCHD3P1-201ENST00000612350 ATP7BP35670 1465 aa10.93□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 SAFB2Q14151 953 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 DNAJC5GQ8N7S2 189 aa10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PRAM1Q96QH2 718 aa10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
PTCHD3P1-201ENST00000612350 ANKRD30BQ9BXX2 1392 aa10.91□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
PTCHD3P1-201ENST00000612350 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
PTCHD3P1-201ENST00000612350 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
PTCHD3P1-201ENST00000612350 BCL9O00512 1426 aa10.91□□□□□ -0.66
PTCHD3P1-201ENST00000612350 SLC34A2O95436 690 aa10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 ITGAEP38570 1179 aa10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 RGL3Q3MIN7 710 aa10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
PTCHD3P1-201ENST00000612350 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
PTCHD3P1-201ENST00000612350 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 PRELPP51888 382 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 DDB1Q16531 1140 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 NLGN2Q8NFZ4 835 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 CPDO75976 1380 aa10.89□□□□□ -0.67
PTCHD3P1-201ENST00000612350 GRIN3BO60391 1043 aa10.88□□□□□ -0.67
PTCHD3P1-201ENST00000612350 COL24A1Q17RW2 1714 aa10.88□□□□□ -0.67
PTCHD3P1-201ENST00000612350 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
PTCHD3P1-201ENST00000612350 COL5A2P05997 1499 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3P1-201ENST00000612350 HIRIP3Q9BW71 556 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3P1-201ENST00000612350 ADCY9O60503 1353 aa10.87□□□□□ -0.67
PTCHD3P1-201ENST00000612350 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
PTCHD3P1-201ENST00000612350 CRB1P82279 1406 aa10.86□□□□□ -0.67
PTCHD3P1-201ENST00000612350 TULP4Q9NRJ4 1543 aa10.86□□□□□ -0.67
PTCHD3P1-201ENST00000612350 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
PTCHD3P1-201ENST00000612350 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
PTCHD3P1-201ENST00000612350 POGKQ9P215 609 aa10.86□□□□□ -0.67
PTCHD3P1-201ENST00000612350 WASLO00401 505 aaPredicted RBP10.85□□□□□ -0.67
PTCHD3P1-201ENST00000612350 KIF3CO14782 793 aa10.85□□□□□ -0.67
PTCHD3P1-201ENST00000612350 APLP1P51693 650 aa10.85□□□□□ -0.67
PTCHD3P1-201ENST00000612350 ZNF827Q17R98 1081 aa10.85□□□□□ -0.67
PTCHD3P1-201ENST00000612350 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 ZNF526Q8TF50 670 aaPredicted RBP10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 SLC16A10Q8TF71 515 aa10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 EIF3AQ14152 1382 aaKnown RBP10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 USP19O94966 1318 aa10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
PTCHD3P1-201ENST00000612350 POLD1P28340 1107 aa10.83□□□□□ -0.68
PTCHD3P1-201ENST00000612350 AKAP12Q02952 1782 aa10.82□□□□□ -0.68
PTCHD3P1-201ENST00000612350 TNS4Q8IZW8 715 aa10.82□□□□□ -0.68
PTCHD3P1-201ENST00000612350 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
PTCHD3P1-201ENST00000612350 GCP02774 474 aa10.81□□□□□ -0.68
PTCHD3P1-201ENST00000612350 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
PTCHD3P1-201ENST00000612350 LRRC4BQ9NT99 713 aa10.81□□□□□ -0.68
PTCHD3P1-201ENST00000612350 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
PTCHD3P1-201ENST00000612350 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
PTCHD3P1-201ENST00000612350 TOM1L2Q6ZVM7 507 aa10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 NUDT16Q96DE0 195 aaKnown RBP10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 CDCA7Q9BWT1 371 aaPredicted RBP10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 QSER1Q2KHR3 1735 aa10.8□□□□□ -0.68
PTCHD3P1-201ENST00000612350 POLR3AO14802 1390 aaPredicted RBP10.79□□□□□ -0.68
PTCHD3P1-201ENST00000612350 TRAK1Q9UPV9 953 aa10.79□□□□□ -0.68
PTCHD3P1-201ENST00000612350 PNPLA7Q6ZV29 1317 aa10.79□□□□□ -0.68
PTCHD3P1-201ENST00000612350 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
PTCHD3P1-201ENST00000612350 ACEP12821 1306 aa10.78□□□□□ -0.68
PTCHD3P1-201ENST00000612350 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
PTCHD3P1-201ENST00000612350 ADGRB1O14514 1584 aa10.77□□□□□ -0.68
PTCHD3P1-201ENST00000612350 EXOC5O00471 708 aa10.77□□□□□ -0.69
PTCHD3P1-201ENST00000612350 NLRP13Q86W25 1043 aa10.77□□□□□ -0.69
PTCHD3P1-201ENST00000612350 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
PTCHD3P1-201ENST00000612350 KLRG1Q96E93 195 aa10.77□□□□□ -0.69
PTCHD3P1-201ENST00000612350 COL18A1P39060 1754 aa10.77□□□□□ -0.69
PTCHD3P1-201ENST00000612350 PLEKHG3A1L390 1219 aa10.76□□□□□ -0.69
PTCHD3P1-201ENST00000612350 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
PTCHD3P1-201ENST00000612350 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
PTCHD3P1-201ENST00000612350 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
PTCHD3P1-201ENST00000612350 WDR17Q8IZU2 1322 aa10.76□□□□□ -0.69
PTCHD3P1-201ENST00000612350 TOMM70O94826 608 aa10.75□□□□□ -0.69
PTCHD3P1-201ENST00000612350 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
PTCHD3P1-201ENST00000612350 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
PTCHD3P1-201ENST00000612350 BTAF1O14981 1849 aa10.74□□□□□ -0.69
PTCHD3P1-201ENST00000612350 TUBGCP6Q96RT7 1819 aa10.74□□□□□ -0.69
PTCHD3P1-201ENST00000612350 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
PTCHD3P1-201ENST00000612350 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
PTCHD3P1-201ENST00000612350 USP6P35125 1406 aa10.74□□□□□ -0.69
PTCHD3P1-201ENST00000612350 ARHGEF28Q8N1W1 1705 aaKnown RBP10.73□□□□□ -0.69
PTCHD3P1-201ENST00000612350 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
PTCHD3P1-201ENST00000612350 HTRA3P83110 453 aa10.73□□□□□ -0.69
PTCHD3P1-201ENST00000612350 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms