RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
PVT1-221ENST00000612011 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
PVT1-221ENST00000612011 AMPHP49418 695 aa13.61□□□□□ -0.23
PVT1-221ENST00000612011 INSRP06213 1382 aa13.6□□□□□ -0.23
PVT1-221ENST00000612011 CPDO75976 1380 aa13.59□□□□□ -0.23
PVT1-221ENST00000612011 JCADQ9P266 1359 aa13.59□□□□□ -0.23
PVT1-221ENST00000612011 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
PVT1-221ENST00000612011 HOXC9P31274 260 aa13.59□□□□□ -0.23
PVT1-221ENST00000612011 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
PVT1-221ENST00000612011 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
PVT1-221ENST00000612011 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
PVT1-221ENST00000612011 KIAA0232Q92628 1395 aa13.58□□□□□ -0.23
PVT1-221ENST00000612011 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.24
PVT1-221ENST00000612011 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
PVT1-221ENST00000612011 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
PVT1-221ENST00000612011 HSPA1LP34931 641 aa13.57□□□□□ -0.24
PVT1-221ENST00000612011 PNISRQ8TF01 805 aaKnown RBP13.57□□□□□ -0.24
PVT1-221ENST00000612011 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
PVT1-221ENST00000612011 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
PVT1-221ENST00000612011 IP6K1Q92551 441 aa13.56□□□□□ -0.24
PVT1-221ENST00000612011 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
PVT1-221ENST00000612011 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
PVT1-221ENST00000612011 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
PVT1-221ENST00000612011 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
PVT1-221ENST00000612011 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
PVT1-221ENST00000612011 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
PVT1-221ENST00000612011 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
PVT1-221ENST00000612011 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
PVT1-221ENST00000612011 LRP6O75581 1613 aa13.53□□□□□ -0.24
PVT1-221ENST00000612011 IL13P35225 146 aa13.53□□□□□ -0.24
PVT1-221ENST00000612011 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
PVT1-221ENST00000612011 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
PVT1-221ENST00000612011 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.25
PVT1-221ENST00000612011 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.25
PVT1-221ENST00000612011 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
PVT1-221ENST00000612011 PKD1L3Q7Z443 1732 aa13.51□□□□□ -0.25
PVT1-221ENST00000612011 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
PVT1-221ENST00000612011 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
PVT1-221ENST00000612011 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
PVT1-221ENST00000612011 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
PVT1-221ENST00000612011 ERBB3P21860 1342 aa13.5□□□□□ -0.25
PVT1-221ENST00000612011 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
PVT1-221ENST00000612011 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
PVT1-221ENST00000612011 YTHDC1Q96MU7 727 aaKnown RBP13.5□□□□□ -0.25
PVT1-221ENST00000612011 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
PVT1-221ENST00000612011 IGSF1Q8N6C5 1336 aa13.49□□□□□ -0.25
PVT1-221ENST00000612011 FAM83GA6ND36 823 aa13.49□□□□□ -0.25
PVT1-221ENST00000612011 HMOX1P09601 288 aa13.48□□□□□ -0.25
PVT1-221ENST00000612011 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
PVT1-221ENST00000612011 EYA1Q99502 592 aa13.48□□□□□ -0.25
PVT1-221ENST00000612011 SLIT2O94813 1529 aa13.48□□□□□ -0.25
PVT1-221ENST00000612011 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
PVT1-221ENST00000612011 KDRP35968 1356 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.25
PVT1-221ENST00000612011 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
PVT1-221ENST00000612011 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 FCHSD2O94868 740 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 PRKAR2BP31323 418 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
PVT1-221ENST00000612011 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
PVT1-221ENST00000612011 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 CRB1P82279 1406 aa13.45□□□□□ -0.26
PVT1-221ENST00000612011 NEFMP07197 916 aa13.44□□□□□ -0.26
PVT1-221ENST00000612011 EVA1CP58658 441 aa13.44□□□□□ -0.26
PVT1-221ENST00000612011 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
PVT1-221ENST00000612011 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
PVT1-221ENST00000612011 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
PVT1-221ENST00000612011 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
PVT1-221ENST00000612011 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
PVT1-221ENST00000612011 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
PVT1-221ENST00000612011 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
PVT1-221ENST00000612011 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
PVT1-221ENST00000612011 MEGF6O75095 1541 aa13.42□□□□□ -0.26
PVT1-221ENST00000612011 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
PVT1-221ENST00000612011 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
PVT1-221ENST00000612011 APAF1O14727 1248 aa13.4□□□□□ -0.26
PVT1-221ENST00000612011 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
PVT1-221ENST00000612011 ITGB4P16144 1822 aa13.4□□□□□ -0.26
PVT1-221ENST00000612011 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
PVT1-221ENST00000612011 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 CARD10Q9BWT7 1032 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 GLI3P10071 1580 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 AFF2P51816 1311 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
PVT1-221ENST00000612011 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
PVT1-221ENST00000612011 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
PVT1-221ENST00000612011 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
PVT1-221ENST00000612011 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
PVT1-221ENST00000612011 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
PVT1-221ENST00000612011 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms