RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 NSD3Q9BZ95 1437 aa36.04■■■■□ 3.36
VEGFA-226ENST00000611736 SPATA31A1Q5TZJ5 1347 aa36.04■■■■□ 3.36
VEGFA-226ENST00000611736 AXIN2Q9Y2T1 843 aa36.03■■■■□ 3.36
VEGFA-226ENST00000611736 FYB1O15117 783 aa36.02■■■■□ 3.36
VEGFA-226ENST00000611736 GGNBP2Q9H3C7 697 aa36.02■■■■□ 3.36
VEGFA-226ENST00000611736 USP35Q9P2H5 1018 aa36.02■■■■□ 3.36
VEGFA-226ENST00000611736 ONECUT3O60422 494 aaPredicted RBP36.01■■■■□ 3.36
VEGFA-226ENST00000611736 LTN1O94822 1766 aa36.01■■■■□ 3.35
VEGFA-226ENST00000611736 RGPD5Q99666 1765 aa36.01■■■■□ 3.35
VEGFA-226ENST00000611736 BRWD3Q6RI45 1802 aa36.01■■■■□ 3.35
VEGFA-226ENST00000611736 KIF20BQ96Q89 1820 aa36.01■■■■□ 3.35
VEGFA-226ENST00000611736 EP400Q96L91 3159 aa35.99■■■■□ 3.35
VEGFA-226ENST00000611736 ABCC6O95255 1503 aa35.94■■■■□ 3.34
VEGFA-226ENST00000611736 KIF7Q2M1P5 1343 aa35.94■■■■□ 3.34
VEGFA-226ENST00000611736 CRB1P82279 1406 aa35.93■■■■□ 3.34
VEGFA-226ENST00000611736 PANK3Q9H999 370 aa35.93■■■■□ 3.34
VEGFA-226ENST00000611736 FBLN1P23142 703 aa35.92■■■■□ 3.34
VEGFA-226ENST00000611736 TOM1L2Q6ZVM7 507 aa35.92■■■■□ 3.34
VEGFA-226ENST00000611736 TCP11L2Q8N4U5 519 aa35.92■■■■□ 3.34
VEGFA-226ENST00000611736 THSD7AQ9UPZ6 1657 aa35.91■■■■□ 3.34
VEGFA-226ENST00000611736 WDR17Q8IZU2 1322 aa35.91■■■■□ 3.34
VEGFA-226ENST00000611736 CSB-PGBD3P0DP91 1061 aa35.91■■■■□ 3.34
VEGFA-226ENST00000611736 CGNL1Q0VF96 1302 aa35.89■■■■□ 3.34
VEGFA-226ENST00000611736 KRT27Q7Z3Y8 459 aa35.89■■■■□ 3.34
VEGFA-226ENST00000611736 BARGINQ6ZT62 677 aa35.88■■■■□ 3.33
VEGFA-226ENST00000611736 MAP3K19Q56UN5 1328 aa35.86■■■■□ 3.33
VEGFA-226ENST00000611736 THRAP3Q9Y2W1 955 aaKnown RBP35.86■■■■□ 3.33
VEGFA-226ENST00000611736 RRS1Q15050 365 aaKnown RBP35.83■■■■□ 3.33
VEGFA-226ENST00000611736 IP6K1Q92551 441 aa35.83■■■■□ 3.33
VEGFA-226ENST00000611736 AMPHP49418 695 aa35.82■■■■□ 3.32
VEGFA-226ENST00000611736 ERBB3P21860 1342 aa35.82■■■■□ 3.32
VEGFA-226ENST00000611736 ANKRD24Q8TF21 1146 aa35.81■■■■□ 3.32
VEGFA-226ENST00000611736 CARD10Q9BWT7 1032 aa35.8■■■■□ 3.32
VEGFA-226ENST00000611736 BLMP54132 1417 aaPredicted RBP35.8■■■■□ 3.32
VEGFA-226ENST00000611736 CCDC7Q96M83 1385 aa35.78■■■■□ 3.32
VEGFA-226ENST00000611736 HOXC9P31274 260 aa35.78■■■■□ 3.32
VEGFA-226ENST00000611736 LTV1Q96GA3 475 aaPredicted RBP35.78■■■■□ 3.32
VEGFA-226ENST00000611736 FAM182BQ5T319 152 aa35.77■■■■□ 3.32
VEGFA-226ENST00000611736 NLRP2Q9NX02 1062 aa35.76■■■■□ 3.32
VEGFA-226ENST00000611736 WASHC2AQ641Q2 1341 aa35.75■■■■□ 3.31
VEGFA-226ENST00000611736 ANKRD26Q9UPS8 1709 aa35.74■■■■□ 3.31
VEGFA-226ENST00000611736 WNK3Q9BYP7 1800 aa35.74■■■■□ 3.31
VEGFA-226ENST00000611736 RTL1A6NKG5 1358 aa35.74■■■■□ 3.31
VEGFA-226ENST00000611736 PARP4Q9UKK3 1724 aaKnown RBP35.74■■■■□ 3.31
VEGFA-226ENST00000611736 PDE3BQ13370 1112 aa35.72■■■■□ 3.31
VEGFA-226ENST00000611736 KNSTRNQ9Y448 316 aa35.72■■■■□ 3.31
VEGFA-226ENST00000611736 CCDC125Q86Z20 511 aa35.71■■■■□ 3.31
VEGFA-226ENST00000611736 PEAK1Q9H792 1746 aa35.7■■■■□ 3.31
VEGFA-226ENST00000611736 TNNT2P45379 298 aaPredicted RBP35.69■■■■□ 3.3
VEGFA-226ENST00000611736 EMILIN1Q9Y6C2 1016 aa35.68■■■■□ 3.3
VEGFA-226ENST00000611736 NSD2O96028 1365 aa35.67■■■■□ 3.3
VEGFA-226ENST00000611736 CDCA7Q9BWT1 371 aaPredicted RBP35.67■■■■□ 3.3
VEGFA-226ENST00000611736 LRRC37A3O60309 1634 aa35.67■■■■□ 3.3
VEGFA-226ENST00000611736 FLT4P35916 1363 aa35.66■■■■□ 3.3
VEGFA-226ENST00000611736 FAM208AQ9UK61 1670 aaKnown RBP35.66■■■■□ 3.3
VEGFA-226ENST00000611736 MAP2P11137 1827 aaKnown RBP35.66■■■■□ 3.3
VEGFA-226ENST00000611736 DISP2A7MBM2 1401 aa35.66■■■■□ 3.3
VEGFA-226ENST00000611736 PPM1GO15355 546 aaPredicted RBP35.65■■■■□ 3.3
VEGFA-226ENST00000611736 DDB1Q16531 1140 aa35.65■■■■□ 3.3
VEGFA-226ENST00000611736 HSP90AB2PQ58FF8 381 aa35.64■■■■□ 3.3
VEGFA-226ENST00000611736 KIF24Q5T7B8 1368 aa35.63■■■■□ 3.29
VEGFA-226ENST00000611736 RGPD2P0DJD1 1756 aa35.62■■■■□ 3.29
VEGFA-226ENST00000611736 INSRP06213 1382 aa35.62■■■■□ 3.29
VEGFA-226ENST00000611736 FAM196AQ6ZSG2 479 aa35.61■■■■□ 3.29
VEGFA-226ENST00000611736 MORC1Q86VD1 984 aa35.61■■■■□ 3.29
VEGFA-226ENST00000611736 SMG6Q86US8 1419 aaKnown RBP35.6■■■■□ 3.29
VEGFA-226ENST00000611736 AMER1Q5JTC6 1135 aaPredicted RBP35.6■■■■□ 3.29
VEGFA-226ENST00000611736 SF3B2Q13435 895 aaKnown RBP35.59■■■■□ 3.29
VEGFA-226ENST00000611736 POLKQ9UBT6 870 aa35.59■■■■□ 3.29
VEGFA-226ENST00000611736 IL2RBP14784 551 aa35.58■■■■□ 3.29
VEGFA-226ENST00000611736 PER1O15534 1290 aaPredicted RBP35.57■■■■□ 3.28
VEGFA-226ENST00000611736 EXOC5O00471 708 aa35.55■■■■□ 3.28
VEGFA-226ENST00000611736 NBPF6Q5VWK0 638 aa35.54■■■■□ 3.28
VEGFA-226ENST00000611736 NBPF4Q96M43 638 aa35.54■■■■□ 3.28
VEGFA-226ENST00000611736 RGPD1P0DJD0 1748 aa35.53■■■■□ 3.28
VEGFA-226ENST00000611736 TNS2Q63HR2 1409 aa35.53■■■■□ 3.28
VEGFA-226ENST00000611736 OVOS2A0A0G2JMS6 1433 aa35.52■■■■□ 3.28
VEGFA-226ENST00000611736 TRIM37O94972 964 aa35.52■■■■□ 3.28
VEGFA-226ENST00000611736 DEFB132Q7Z7B7 95 aa35.52■■■■□ 3.28
VEGFA-226ENST00000611736 USHBP1Q8N6Y0 703 aa35.52■■■■□ 3.28
VEGFA-226ENST00000611736 MARCH10Q8NA82 808 aaPredicted RBP35.52■■■■□ 3.28
VEGFA-226ENST00000611736 CC2D1BQ5T0F9 858 aaKnown RBP35.5■■■■□ 3.27
VEGFA-226ENST00000611736 CNGB1Q14028 1251 aaPredicted RBP35.48■■■■□ 3.27
VEGFA-226ENST00000611736 TNS1Q9HBL0 1735 aaKnown RBP35.47■■■■□ 3.27
VEGFA-226ENST00000611736 BAG6P46379 1132 aa35.45■■■■□ 3.27
VEGFA-226ENST00000611736 MEGF6O75095 1541 aa35.43■■■■□ 3.26
VEGFA-226ENST00000611736 ZEB1P37275 1124 aaPredicted RBP35.43■■■■□ 3.26
VEGFA-226ENST00000611736 SBF2Q86WG5 1849 aa35.41■■■■□ 3.26
VEGFA-226ENST00000611736 EIF4A2Q14240 407 aaKnown RBP35.4■■■■□ 3.26
VEGFA-226ENST00000611736 RAPGEF4Q8WZA2 1011 aa35.4■■■■□ 3.26
VEGFA-226ENST00000611736 NPC1L1Q9UHC9 1359 aa35.39■■■■□ 3.26
VEGFA-226ENST00000611736 APBA3O96018 575 aa35.38■■■■□ 3.25
VEGFA-226ENST00000611736 EN1Q05925 392 aaPredicted RBP35.38■■■■□ 3.25
VEGFA-226ENST00000611736 DDX54Q8TDD1 881 aaKnown RBP35.37■■■■□ 3.25
VEGFA-226ENST00000611736 EYA1Q99502 592 aa35.37■■■■□ 3.25
VEGFA-226ENST00000611736 BCL9O00512 1426 aa35.37■■■■□ 3.25
VEGFA-226ENST00000611736 TATP17735 454 aaPredicted RBP35.35■■■■□ 3.25
VEGFA-226ENST00000611736 ZCRB1Q8TBF4 217 aaKnown RBP35.35■■■■□ 3.25
VEGFA-226ENST00000611736 KAT6BQ8WYB5 2073 aa35.35■■■■□ 3.25
VEGFA-226ENST00000611736 NCAPD2Q15021 1401 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms