RNA–Protein interactions for RNA: ENST00000610539.1

PCDHGC4-202, Transcript of protocadherin gamma subfamily C, 4, humanhuman

TSL 4

Gene PCDHGC4, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-202ENST00000610539 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
PCDHGC4-202ENST00000610539 CRB1P82279 1406 aa19.17■□□□□ 0.66
PCDHGC4-202ENST00000610539 RGPD5Q99666 1765 aa19.16■□□□□ 0.66
PCDHGC4-202ENST00000610539 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
PCDHGC4-202ENST00000610539 LTN1O94822 1766 aa19.15■□□□□ 0.66
PCDHGC4-202ENST00000610539 EIF4G2P78344 907 aaKnown RBP eCLIP19.15■□□□□ 0.66
PCDHGC4-202ENST00000610539 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
PCDHGC4-202ENST00000610539 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
PCDHGC4-202ENST00000610539 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.66
PCDHGC4-202ENST00000610539 A0A0G2JS52 829 aa19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 SOX12O15370 315 aa19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 MYT1Q01538 1121 aa19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
PCDHGC4-202ENST00000610539 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
PCDHGC4-202ENST00000610539 FYB1O15117 783 aa19.1■□□□□ 0.65
PCDHGC4-202ENST00000610539 COG3Q96JB2 828 aa19.09■□□□□ 0.65
PCDHGC4-202ENST00000610539 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
PCDHGC4-202ENST00000610539 KIF20BQ96Q89 1820 aa19.09■□□□□ 0.65
PCDHGC4-202ENST00000610539 ERBB3P21860 1342 aa19.08■□□□□ 0.65
PCDHGC4-202ENST00000610539 TOM1L2Q6ZVM7 507 aa19.08■□□□□ 0.64
PCDHGC4-202ENST00000610539 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.64
PCDHGC4-202ENST00000610539 RGPD1P0DJD0 1748 aa19.07■□□□□ 0.64
PCDHGC4-202ENST00000610539 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
PCDHGC4-202ENST00000610539 LRRC37A3O60309 1634 aa19.07■□□□□ 0.64
PCDHGC4-202ENST00000610539 CDCA7Q9BWT1 371 aaPredicted RBP19.06■□□□□ 0.64
PCDHGC4-202ENST00000610539 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
PCDHGC4-202ENST00000610539 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
PCDHGC4-202ENST00000610539 IP6K1Q92551 441 aa19.05■□□□□ 0.64
PCDHGC4-202ENST00000610539 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
PCDHGC4-202ENST00000610539 TNS1Q9HBL0 1735 aaKnown RBP19.04■□□□□ 0.64
PCDHGC4-202ENST00000610539 FAM208AQ9UK61 1670 aaKnown RBP19.04■□□□□ 0.64
PCDHGC4-202ENST00000610539 MAP3K19Q56UN5 1328 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 FAM182BQ5T319 152 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
PCDHGC4-202ENST00000610539 C11orf95C9JLR9 678 aaPredicted RBP19.02■□□□□ 0.64
PCDHGC4-202ENST00000610539 CSB-PGBD3P0DP91 1061 aa19.02■□□□□ 0.64
PCDHGC4-202ENST00000610539 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
PCDHGC4-202ENST00000610539 BCL9O00512 1426 aa19.01■□□□□ 0.63
PCDHGC4-202ENST00000610539 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
PCDHGC4-202ENST00000610539 HOXC9P31274 260 aa19■□□□□ 0.63
PCDHGC4-202ENST00000610539 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
PCDHGC4-202ENST00000610539 DDB1Q16531 1140 aa18.99■□□□□ 0.63
PCDHGC4-202ENST00000610539 DEFB132Q7Z7B7 95 aa18.99■□□□□ 0.63
PCDHGC4-202ENST00000610539 OVOS2A0A0G2JMS6 1433 aa18.99■□□□□ 0.63
PCDHGC4-202ENST00000610539 FBLN1P23142 703 aa18.98■□□□□ 0.63
PCDHGC4-202ENST00000610539 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
PCDHGC4-202ENST00000610539 SBF2Q86WG5 1849 aa18.97■□□□□ 0.63
PCDHGC4-202ENST00000610539 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
PCDHGC4-202ENST00000610539 BAG6P46379 1132 aa18.97■□□□□ 0.63
PCDHGC4-202ENST00000610539 TNS2Q63HR2 1409 aa18.97■□□□□ 0.63
PCDHGC4-202ENST00000610539 AMPHP49418 695 aa18.96■□□□□ 0.63
PCDHGC4-202ENST00000610539 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
PCDHGC4-202ENST00000610539 NLRP2Q9NX02 1062 aa18.96■□□□□ 0.63
PCDHGC4-202ENST00000610539 TRIM37O94972 964 aa18.94■□□□□ 0.62
PCDHGC4-202ENST00000610539 MARCH10Q8NA82 808 aaPredicted RBP18.94■□□□□ 0.62
PCDHGC4-202ENST00000610539 PANK3Q9H999 370 aa18.94■□□□□ 0.62
PCDHGC4-202ENST00000610539 SRCAPQ6ZRS2 3230 aa18.94■□□□□ 0.62
PCDHGC4-202ENST00000610539 INSRP06213 1382 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 FLT4P35916 1363 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 EXOC5O00471 708 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 IL2RBP14784 551 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 POLR3GLQ9BT43 218 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
PCDHGC4-202ENST00000610539 RGPD2P0DJD1 1756 aa18.92■□□□□ 0.62
PCDHGC4-202ENST00000610539 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
PCDHGC4-202ENST00000610539 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
PCDHGC4-202ENST00000610539 NSD2O96028 1365 aa18.92■□□□□ 0.62
PCDHGC4-202ENST00000610539 EN1Q05925 392 aaPredicted RBP18.91■□□□□ 0.62
PCDHGC4-202ENST00000610539 CAMKK2Q96RR4 588 aa18.91■□□□□ 0.62
PCDHGC4-202ENST00000610539 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
PCDHGC4-202ENST00000610539 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
PCDHGC4-202ENST00000610539 RREB1Q92766 1687 aa18.9■□□□□ 0.62
PCDHGC4-202ENST00000610539 LTV1Q96GA3 475 aaPredicted RBP18.89■□□□□ 0.61
PCDHGC4-202ENST00000610539 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
PCDHGC4-202ENST00000610539 APBA3O96018 575 aa18.88■□□□□ 0.61
PCDHGC4-202ENST00000610539 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
PCDHGC4-202ENST00000610539 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
PCDHGC4-202ENST00000610539 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
PCDHGC4-202ENST00000610539 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
PCDHGC4-202ENST00000610539 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
PCDHGC4-202ENST00000610539 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
PCDHGC4-202ENST00000610539 BCL11BQ9C0K0 894 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC4-202ENST00000610539 EZH2Q15910 746 aaKnown RBP18.86■□□□□ 0.61
PCDHGC4-202ENST00000610539 POLKQ9UBT6 870 aa18.86■□□□□ 0.61
PCDHGC4-202ENST00000610539 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
PCDHGC4-202ENST00000610539 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
PCDHGC4-202ENST00000610539 PLSCR1O15162 318 aa18.85■□□□□ 0.61
PCDHGC4-202ENST00000610539 MEGF6O75095 1541 aa18.84■□□□□ 0.61
PCDHGC4-202ENST00000610539 NUP188Q5SRE5 1749 aa18.84■□□□□ 0.61
PCDHGC4-202ENST00000610539 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
PCDHGC4-202ENST00000610539 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
PCDHGC4-202ENST00000610539 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
PCDHGC4-202ENST00000610539 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
PCDHGC4-202ENST00000610539 ZCRB1Q8TBF4 217 aaKnown RBP18.79■□□□□ 0.6
PCDHGC4-202ENST00000610539 KCNQ2O43526 872 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms