RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SLIT3O75094 1523 aa24.99■■□□□ 1.59
CHMP4A-211ENST00000609024 ZBTB7AO95365 584 aa24.99■■□□□ 1.59
CHMP4A-211ENST00000609024 SBF2Q86WG5 1849 aa24.99■■□□□ 1.59
CHMP4A-211ENST00000609024 KCNH5Q8NCM2 988 aa24.99■■□□□ 1.59
CHMP4A-211ENST00000609024 ANO8Q9HCE9 1232 aaPredicted RBP24.99■■□□□ 1.59
CHMP4A-211ENST00000609024 QRICH2Q9H0J4 1663 aa24.98■■□□□ 1.59
CHMP4A-211ENST00000609024 EVC2Q86UK5 1308 aa24.98■■□□□ 1.59
CHMP4A-211ENST00000609024 SOX12O15370 315 aa24.98■■□□□ 1.59
CHMP4A-211ENST00000609024 EXOC5O00471 708 aa24.97■■□□□ 1.59
CHMP4A-211ENST00000609024 MARCH10Q8NA82 808 aaPredicted RBP24.97■■□□□ 1.59
CHMP4A-211ENST00000609024 AKAP12Q02952 1782 aa24.95■■□□□ 1.59
CHMP4A-211ENST00000609024 PTF1AQ7RTS3 328 aa24.95■■□□□ 1.58
CHMP4A-211ENST00000609024 ATF5Q9Y2D1 282 aaPredicted RBP24.95■■□□□ 1.58
CHMP4A-211ENST00000609024 AXIN2Q9Y2T1 843 aa24.95■■□□□ 1.58
CHMP4A-211ENST00000609024 ZNF692Q9BU19 519 aaPredicted RBP24.94■■□□□ 1.58
CHMP4A-211ENST00000609024 CARD10Q9BWT7 1032 aa24.94■■□□□ 1.58
CHMP4A-211ENST00000609024 CPSF1Q10570 1443 aaKnown RBP24.94■■□□□ 1.58
CHMP4A-211ENST00000609024 TXNRD1Q16881 649 aa24.93■■□□□ 1.58
CHMP4A-211ENST00000609024 ARHGEF25Q86VW2 580 aa24.92■■□□□ 1.58
CHMP4A-211ENST00000609024 CASZ1Q86V15 1759 aa24.92■■□□□ 1.58
CHMP4A-211ENST00000609024 WNK3Q9BYP7 1800 aa24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 SLC15A2Q16348 729 aa24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 PROM2Q8N271 834 aa24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 PDGFDQ9GZP0 370 aaPredicted RBP24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 BCL9O00512 1426 aa24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
CHMP4A-211ENST00000609024 COL18A1P39060 1754 aa24.9■■□□□ 1.58
CHMP4A-211ENST00000609024 TTC21BQ7Z4L5 1316 aa24.89■■□□□ 1.58
CHMP4A-211ENST00000609024 CCDC7Q96M83 1385 aa24.89■■□□□ 1.57
CHMP4A-211ENST00000609024 TTC21AQ8NDW8 1320 aa24.88■■□□□ 1.57
CHMP4A-211ENST00000609024 MTFR1LQ9H019 292 aa24.87■■□□□ 1.57
CHMP4A-211ENST00000609024 MYOM1P52179 1685 aa24.87■■□□□ 1.57
CHMP4A-211ENST00000609024 PTGER2P43116 358 aa24.86■■□□□ 1.57
CHMP4A-211ENST00000609024 FHDC1Q9C0D6 1143 aaPredicted RBP24.86■■□□□ 1.57
CHMP4A-211ENST00000609024 SYT17Q9BSW7 474 aa24.85■■□□□ 1.57
CHMP4A-211ENST00000609024 TRPM1Q7Z4N2 1603 aa24.85■■□□□ 1.57
CHMP4A-211ENST00000609024 RGPD5Q99666 1765 aa24.85■■□□□ 1.57
CHMP4A-211ENST00000609024 KTN1Q86UP2 1357 aaKnown RBP24.83■■□□□ 1.57
CHMP4A-211ENST00000609024 ZNF784Q8NCA9 323 aaPredicted RBP24.83■■□□□ 1.57
CHMP4A-211ENST00000609024 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
CHMP4A-211ENST00000609024 NLRP2Q9NX02 1062 aa24.82■■□□□ 1.56
CHMP4A-211ENST00000609024 TNS2Q63HR2 1409 aa24.81■■□□□ 1.56
CHMP4A-211ENST00000609024 L3MBTL2Q969R5 705 aa24.8■■□□□ 1.56
CHMP4A-211ENST00000609024 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
CHMP4A-211ENST00000609024 ARXQ96QS3 562 aa24.79■■□□□ 1.56
CHMP4A-211ENST00000609024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.78■■□□□ 1.56
CHMP4A-211ENST00000609024 IL2RBP14784 551 aa24.77■■□□□ 1.56
CHMP4A-211ENST00000609024 ABCC6O95255 1503 aa24.76■■□□□ 1.55
CHMP4A-211ENST00000609024 NHSQ6T4R5 1651 aa24.75■■□□□ 1.55
CHMP4A-211ENST00000609024 NFAT5O94916 1531 aa24.75■■□□□ 1.55
CHMP4A-211ENST00000609024 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
CHMP4A-211ENST00000609024 KLHL34Q8N239 644 aa24.74■■□□□ 1.55
CHMP4A-211ENST00000609024 ERBB3P21860 1342 aa24.73■■□□□ 1.55
CHMP4A-211ENST00000609024 GPR162Q16538 588 aa24.73■■□□□ 1.55
CHMP4A-211ENST00000609024 KAT6BQ8WYB5 2073 aa24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 CHD4Q14839 1912 aa24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 HDGFL2Q7Z4V5 671 aaPredicted RBP24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 TMC1Q8TDI8 760 aa24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 ANKRD24Q8TF21 1146 aa24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 SGIP1Q9BQI5 828 aa24.71■■□□□ 1.55
CHMP4A-211ENST00000609024 POLD1P28340 1107 aa24.7■■□□□ 1.54
CHMP4A-211ENST00000609024 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
CHMP4A-211ENST00000609024 NME9Q86XW9 330 aa24.68■■□□□ 1.54
CHMP4A-211ENST00000609024 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
CHMP4A-211ENST00000609024 USP31Q70CQ4 1352 aa24.67■■□□□ 1.54
CHMP4A-211ENST00000609024 C1QTNF8P60827 252 aa24.67■■□□□ 1.54
CHMP4A-211ENST00000609024 MON2Q7Z3U7 1717 aa24.66■■□□□ 1.54
CHMP4A-211ENST00000609024 BTAF1O14981 1849 aa24.66■■□□□ 1.54
CHMP4A-211ENST00000609024 DDX54Q8TDD1 881 aaKnown RBP24.66■■□□□ 1.54
CHMP4A-211ENST00000609024 SLC16A10Q8TF71 515 aa24.66■■□□□ 1.54
CHMP4A-211ENST00000609024 MAP3K5Q99683 1374 aa24.66■■□□□ 1.54
CHMP4A-211ENST00000609024 LTN1O94822 1766 aa24.65■■□□□ 1.54
CHMP4A-211ENST00000609024 ZNF827Q17R98 1081 aa24.65■■□□□ 1.54
CHMP4A-211ENST00000609024 SLC27A3Q5K4L6 730 aa24.65■■□□□ 1.54
CHMP4A-211ENST00000609024 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
CHMP4A-211ENST00000609024 SYTL4Q96C24 671 aaPredicted RBP24.64■■□□□ 1.54
CHMP4A-211ENST00000609024 TERF2IPQ9NYB0 399 aa24.63■■□□□ 1.53
CHMP4A-211ENST00000609024 TFCP2L1Q9NZI6 479 aa24.63■■□□□ 1.53
CHMP4A-211ENST00000609024 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
CHMP4A-211ENST00000609024 LRRC4BQ9NT99 713 aa24.62■■□□□ 1.53
CHMP4A-211ENST00000609024 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
CHMP4A-211ENST00000609024 GIGYF1O75420 1035 aaPredicted RBP24.6■■□□□ 1.53
CHMP4A-211ENST00000609024 UTRNP46939 3433 aa24.59■■□□□ 1.53
CHMP4A-211ENST00000609024 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
CHMP4A-211ENST00000609024 AKT1S1Q96B36 256 aa24.59■■□□□ 1.53
CHMP4A-211ENST00000609024 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
CHMP4A-211ENST00000609024 USP54Q70EL1 1684 aa24.58■■□□□ 1.53
CHMP4A-211ENST00000609024 EDC4Q6P2E9 1401 aaKnown RBP24.58■■□□□ 1.53
CHMP4A-211ENST00000609024 MSH5O43196 834 aa24.57■■□□□ 1.52
CHMP4A-211ENST00000609024 SLC12A5Q9H2X9 1139 aa24.57■■□□□ 1.52
CHMP4A-211ENST00000609024 IP6K1Q92551 441 aa24.56■■□□□ 1.52
CHMP4A-211ENST00000609024 PNPLA7Q6ZV29 1317 aa24.55■■□□□ 1.52
CHMP4A-211ENST00000609024 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
CHMP4A-211ENST00000609024 PRIM1P49642 420 aaKnown RBP24.54■■□□□ 1.52
CHMP4A-211ENST00000609024 QSER1Q2KHR3 1735 aa24.52■■□□□ 1.52
CHMP4A-211ENST00000609024 AMPHP49418 695 aa24.52■■□□□ 1.52
CHMP4A-211ENST00000609024 KCNQ4P56696 695 aa24.52■■□□□ 1.52
CHMP4A-211ENST00000609024 FAM208AQ9UK61 1670 aaKnown RBP24.52■■□□□ 1.52
CHMP4A-211ENST00000609024 ANKRD36BQ8N2N9 1353 aa24.52■■□□□ 1.52
CHMP4A-211ENST00000609024 GRIN3BO60391 1043 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms