RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 KIAA2012Q0VF49 1180 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 AP1ARQ63HQ0 302 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 OGFRQ9NZT2 677 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 SMC3Q9UQE7 1217 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 JRKLQ9Y4A0 524 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 SAMD9LQ8IVG5 1584 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 MYO5CQ9NQX4 1742 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 RIMBP3CA6NJZ7 1639 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 RIMBP3BA6NNM3 1639 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 APBB1O00213 710 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 CAND2O75155 1236 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 PAX3P23760 479 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 TRDNQ13061 729 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 HSP90AB2PQ58FF8 381 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 ZKSCAN2Q63HK3 967 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 MTA3Q9BTC8 594 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 RMI1Q9H9A7 625 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 RIMBP3Q9UFD9 1639 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 MAST1Q9Y2H9 1570 aa5.72□□□□□ -1.49
HDDC2-208ENST00000609021 ZRANB2O95218 330 aaKnown RBP eCLIP5.71□□□□□ -1.49
HDDC2-208ENST00000609021 NEFHP12036 1026 aa5.71□□□□□ -1.49
HDDC2-208ENST00000609021 HNRNPUL2Q1KMD3 747 aaKnown RBP5.71□□□□□ -1.49
HDDC2-208ENST00000609021 CCDC34Q96HJ3 373 aa5.71□□□□□ -1.49
HDDC2-208ENST00000609021 PTPRKQ15262 1439 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 PEX14O75381 377 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 XPCQ01831 940 aaPredicted RBP5.71□□□□□ -1.5
HDDC2-208ENST00000609021 JAKMIP3Q5VZ66 844 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 TNPO1Q92973 898 aaKnown RBP5.71□□□□□ -1.5
HDDC2-208ENST00000609021 CFAP53Q96M91 514 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 DEPDC5O75140 1603 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 ZBED9Q6R2W3 1325 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 KLHL33A6NCF5 533 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 RBM5P52756 815 aaKnown RBP eCLIP5.71□□□□□ -1.5
HDDC2-208ENST00000609021 ATP2B3Q16720 1220 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 ZC3H12AQ5D1E8 599 aaKnown RBP5.71□□□□□ -1.5
HDDC2-208ENST00000609021 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.5
HDDC2-208ENST00000609021 CCDC18Q5T9S5 1454 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 PLB1Q6P1J6 1458 aa5.71□□□□□ -1.5
HDDC2-208ENST00000609021 FSD2A1L4K1 749 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 MARCH6O60337 910 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 CASQ1P31415 396 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 KRBA2Q6ZNG9 492 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 C10orf67Q8IYJ2 551 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 CHCHD3Q9NX63 227 aaKnown RBP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 MAPKBP1O60336 1514 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 HMGB1P1B2RPK0 211 aaPredicted RBP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 EPB41L2O43491 1005 aaKnown RBP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 HTATSF1O43719 755 aaKnown RBP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 DNAJC14Q6Y2X3 702 aaPredicted RBP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 SDR16C5Q8N3Y7 309 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 PRIMPOLQ96LW4 560 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 PAXBP1Q9Y5B6 917 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 PHLDB1Q86UU1 1377 aa5.7□□□□□ -1.5
HDDC2-208ENST00000609021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDDC2-208ENST00000609021 ATP10BO94823 1461 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 CCDC196A0A1B0GTZ2 297 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 A0A1B0GUL7 405 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 TRAK2O60296 914 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 HSP90AB1P08238 724 aaKnown RBP5.69□□□□□ -1.5
HDDC2-208ENST00000609021 CSB-PGBD3P0DP91 1061 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 NUTM2GQ5VZR2 741 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 SIN3AQ96ST3 1273 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 FRMPD1Q5SYB0 1578 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 ERBB3P21860 1342 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 NOP2P46087 812 aaKnown RBP5.69□□□□□ -1.5
HDDC2-208ENST00000609021 KANK4Q5T7N3 995 aaPredicted RBP5.69□□□□□ -1.5
HDDC2-208ENST00000609021 ARHGEF5Q12774 1597 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 SH3BP5O60239 455 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 DSG3P32926 999 aa5.69□□□□□ -1.5
HDDC2-208ENST00000609021 RPUSD2Q8IZ73 545 aaKnown RBP5.69□□□□□ -1.5
HDDC2-208ENST00000609021 RICTORQ6R327 1708 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 NASPP49321 788 aaPredicted RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 NEXNQ0ZGT2 675 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 TTC31Q49AM3 519 aaPredicted RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 TEX35Q5T0J7 233 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 MYRIPQ8NFW9 859 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 ARAP3Q8WWN8 1544 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 MROH1Q8NDA8 1641 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 EIF3JO75822 258 aaKnown RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 ERCC3P19447 782 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 MCM5P33992 734 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 RDXP35241 583 aaKnown RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 FOSBP53539 338 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 RHBDL3P58872 404 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 ZSCAN26Q16670 478 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 CCDC125Q86Z20 511 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 HSCBQ8IWL3 235 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 ANKRD13AQ8IZ07 590 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 STK24Q9Y6E0 443 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 SMAPO00193 183 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 COQ9O75208 318 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 GPS2Q13227 327 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 SART3Q15020 963 aaKnown RBP5.68□□□□□ -1.5
HDDC2-208ENST00000609021 FAM161AQ3B820 660 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms