RNA–Protein interactions for RNA: ENST00000608917.1

PACERR-201, PTGS2 antisense NFKB1 complex-mediated expression regulator RNA, humanhuman

BASIC

Gene PACERR, Length 825 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACERR-201ENST00000608917 EMILIN1Q9Y6C2 1016 aa12.62□□□□□ -0.39
PACERR-201ENST00000608917 MTHFSP49914 203 aa12.61□□□□□ -0.39
PACERR-201ENST00000608917 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
PACERR-201ENST00000608917 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
PACERR-201ENST00000608917 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
PACERR-201ENST00000608917 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
PACERR-201ENST00000608917 HOXC9P31274 260 aa12.6□□□□□ -0.39
PACERR-201ENST00000608917 BTG4Q9NY30 223 aa12.6□□□□□ -0.39
PACERR-201ENST00000608917 AXIN2Q9Y2T1 843 aa12.6□□□□□ -0.39
PACERR-201ENST00000608917 NFAT5O94916 1531 aa12.6□□□□□ -0.39
PACERR-201ENST00000608917 MYBBP1AQ9BQG0 1328 aaKnown RBP12.6□□□□□ -0.39
PACERR-201ENST00000608917 LRP6O75581 1613 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 FLT4P35916 1363 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 KCNA4P22459 653 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 EVA1CP58658 441 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
PACERR-201ENST00000608917 KIF20BQ96Q89 1820 aa12.58□□□□□ -0.4
PACERR-201ENST00000608917 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
PACERR-201ENST00000608917 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
PACERR-201ENST00000608917 INSRP06213 1382 aa12.57□□□□□ -0.4
PACERR-201ENST00000608917 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
PACERR-201ENST00000608917 ANKRD24Q8TF21 1146 aa12.57□□□□□ -0.4
PACERR-201ENST00000608917 USP21Q9UK80 565 aa12.57□□□□□ -0.4
PACERR-201ENST00000608917 AFF2P51816 1311 aa12.57□□□□□ -0.4
PACERR-201ENST00000608917 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
PACERR-201ENST00000608917 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
PACERR-201ENST00000608917 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
PACERR-201ENST00000608917 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
PACERR-201ENST00000608917 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
PACERR-201ENST00000608917 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
PACERR-201ENST00000608917 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 SLIT2O94813 1529 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 ABCC6O95255 1503 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 ERBB3P21860 1342 aa12.55□□□□□ -0.4
PACERR-201ENST00000608917 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
PACERR-201ENST00000608917 WDR17Q8IZU2 1322 aa12.54□□□□□ -0.4
PACERR-201ENST00000608917 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
PACERR-201ENST00000608917 IL13P35225 146 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
PACERR-201ENST00000608917 VPS72Q15906 364 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
PACERR-201ENST00000608917 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 TRPC5Q9UL62 973 aaPredicted RBP12.53□□□□□ -0.4
PACERR-201ENST00000608917 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
PACERR-201ENST00000608917 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
PACERR-201ENST00000608917 ABCA3Q99758 1704 aa12.52□□□□□ -0.41
PACERR-201ENST00000608917 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
PACERR-201ENST00000608917 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
PACERR-201ENST00000608917 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
PACERR-201ENST00000608917 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
PACERR-201ENST00000608917 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
PACERR-201ENST00000608917 EYA1Q99502 592 aa12.51□□□□□ -0.41
PACERR-201ENST00000608917 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
PACERR-201ENST00000608917 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
PACERR-201ENST00000608917 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
PACERR-201ENST00000608917 MIER1Q8N108 512 aa12.5□□□□□ -0.41
PACERR-201ENST00000608917 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
PACERR-201ENST00000608917 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
PACERR-201ENST00000608917 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
PACERR-201ENST00000608917 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
PACERR-201ENST00000608917 CRB1P82279 1406 aa12.49□□□□□ -0.41
PACERR-201ENST00000608917 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
PACERR-201ENST00000608917 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
PACERR-201ENST00000608917 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
PACERR-201ENST00000608917 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
PACERR-201ENST00000608917 COL18A1P39060 1754 aa12.48□□□□□ -0.41
PACERR-201ENST00000608917 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
PACERR-201ENST00000608917 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
PACERR-201ENST00000608917 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
PACERR-201ENST00000608917 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
PACERR-201ENST00000608917 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
PACERR-201ENST00000608917 ATRNO75882 1429 aa12.47□□□□□ -0.41
PACERR-201ENST00000608917 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
PACERR-201ENST00000608917 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
PACERR-201ENST00000608917 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
PACERR-201ENST00000608917 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
PACERR-201ENST00000608917 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
PACERR-201ENST00000608917 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
PACERR-201ENST00000608917 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
PACERR-201ENST00000608917 FCHSD2O94868 740 aa12.46□□□□□ -0.41
PACERR-201ENST00000608917 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
PACERR-201ENST00000608917 RXRBP28702 533 aa12.46□□□□□ -0.41
PACERR-201ENST00000608917 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.41
PACERR-201ENST00000608917 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
PACERR-201ENST00000608917 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
PACERR-201ENST00000608917 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
PACERR-201ENST00000608917 IL2RBP14784 551 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
PACERR-201ENST00000608917 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
PACERR-201ENST00000608917 LTN1O94822 1766 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
PACERR-201ENST00000608917 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms