RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 UNC5CLQ8IV45 518 aa16.77■□□□□ 0.28
LINC00963-212ENST00000608669 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-212ENST00000608669 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
LINC00963-212ENST00000608669 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
LINC00963-212ENST00000608669 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-212ENST00000608669 KNSTRNQ9Y448 316 aa16.76■□□□□ 0.27
LINC00963-212ENST00000608669 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
LINC00963-212ENST00000608669 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
LINC00963-212ENST00000608669 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
LINC00963-212ENST00000608669 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
LINC00963-212ENST00000608669 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
LINC00963-212ENST00000608669 RGS12O14924 1447 aa16.74■□□□□ 0.27
LINC00963-212ENST00000608669 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
LINC00963-212ENST00000608669 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
LINC00963-212ENST00000608669 PER1O15534 1290 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-212ENST00000608669 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-212ENST00000608669 EVA1CP58658 441 aa16.72■□□□□ 0.27
LINC00963-212ENST00000608669 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
LINC00963-212ENST00000608669 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 A0A0G2JS52 829 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 RXRBP28702 533 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 MYT1Q01538 1121 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
LINC00963-212ENST00000608669 WNK3Q9BYP7 1800 aa16.7■□□□□ 0.26
LINC00963-212ENST00000608669 HOXC9P31274 260 aa16.7■□□□□ 0.26
LINC00963-212ENST00000608669 AMPHP49418 695 aa16.7■□□□□ 0.26
LINC00963-212ENST00000608669 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
LINC00963-212ENST00000608669 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
LINC00963-212ENST00000608669 VPS72Q15906 364 aa16.69■□□□□ 0.26
LINC00963-212ENST00000608669 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
LINC00963-212ENST00000608669 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
LINC00963-212ENST00000608669 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
LINC00963-212ENST00000608669 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
LINC00963-212ENST00000608669 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
LINC00963-212ENST00000608669 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
LINC00963-212ENST00000608669 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
LINC00963-212ENST00000608669 SPATA31A1Q5TZJ5 1347 aa16.67■□□□□ 0.26
LINC00963-212ENST00000608669 NSD2O96028 1365 aa16.66■□□□□ 0.26
LINC00963-212ENST00000608669 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
LINC00963-212ENST00000608669 CRB1P82279 1406 aa16.66■□□□□ 0.26
LINC00963-212ENST00000608669 POLKQ9UBT6 870 aa16.66■□□□□ 0.26
LINC00963-212ENST00000608669 ERBB3P21860 1342 aa16.66■□□□□ 0.26
LINC00963-212ENST00000608669 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 ABCC6O95255 1503 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 FAM182BQ5T319 152 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 IP6K1Q92551 441 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
LINC00963-212ENST00000608669 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
LINC00963-212ENST00000608669 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
LINC00963-212ENST00000608669 RTL1A6NKG5 1358 aa16.64■□□□□ 0.25
LINC00963-212ENST00000608669 FLT4P35916 1363 aa16.64■□□□□ 0.25
LINC00963-212ENST00000608669 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
LINC00963-212ENST00000608669 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
LINC00963-212ENST00000608669 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
LINC00963-212ENST00000608669 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
LINC00963-212ENST00000608669 MTHFSP49914 203 aa16.59■□□□□ 0.25
LINC00963-212ENST00000608669 NBPF6Q5VWK0 638 aa16.59■□□□□ 0.25
LINC00963-212ENST00000608669 NBPF4Q96M43 638 aa16.59■□□□□ 0.25
LINC00963-212ENST00000608669 INSRP06213 1382 aa16.59■□□□□ 0.25
LINC00963-212ENST00000608669 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
LINC00963-212ENST00000608669 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
LINC00963-212ENST00000608669 EIF4A2Q14240 407 aaKnown RBP16.58■□□□□ 0.24
LINC00963-212ENST00000608669 MEGF6O75095 1541 aa16.58■□□□□ 0.24
LINC00963-212ENST00000608669 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
LINC00963-212ENST00000608669 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
LINC00963-212ENST00000608669 CARD10Q9BWT7 1032 aa16.56■□□□□ 0.24
LINC00963-212ENST00000608669 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
LINC00963-212ENST00000608669 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
LINC00963-212ENST00000608669 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
LINC00963-212ENST00000608669 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
LINC00963-212ENST00000608669 RGPD1P0DJD0 1748 aa16.54■□□□□ 0.24
LINC00963-212ENST00000608669 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
LINC00963-212ENST00000608669 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
LINC00963-212ENST00000608669 EYA1Q99502 592 aa16.53■□□□□ 0.24
LINC00963-212ENST00000608669 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
LINC00963-212ENST00000608669 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
LINC00963-212ENST00000608669 EP400Q96L91 3159 aa16.52■□□□□ 0.23
LINC00963-212ENST00000608669 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
LINC00963-212ENST00000608669 HMOX1P09601 288 aa16.5■□□□□ 0.23
LINC00963-212ENST00000608669 IL2RBP14784 551 aa16.5■□□□□ 0.23
LINC00963-212ENST00000608669 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
LINC00963-212ENST00000608669 IL13P35225 146 aa16.49■□□□□ 0.23
LINC00963-212ENST00000608669 DDB1Q16531 1140 aa16.49■□□□□ 0.23
LINC00963-212ENST00000608669 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
LINC00963-212ENST00000608669 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
LINC00963-212ENST00000608669 OVOS2A0A0G2JMS6 1433 aa16.47■□□□□ 0.23
LINC00963-212ENST00000608669 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
LINC00963-212ENST00000608669 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-212ENST00000608669 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
LINC00963-212ENST00000608669 PKD1L3Q7Z443 1732 aa16.47■□□□□ 0.23
LINC00963-212ENST00000608669 DOT1LQ8TEK3 1739 aa16.47■□□□□ 0.23
LINC00963-212ENST00000608669 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
LINC00963-212ENST00000608669 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
LINC00963-212ENST00000608669 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
LINC00963-212ENST00000608669 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
LINC00963-212ENST00000608669 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
LINC00963-212ENST00000608669 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
LINC00963-212ENST00000608669 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms