RNA–Protein interactions for RNA: ENST00000608654.5

LINC00877-209, long intergenic non-protein coding RNA 877, humanhuman

TSL 5

Gene LINC00877, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-209ENST00000608654 BCL11BQ9C0K0 894 aaPredicted RBP24.09■■□□□ 1.45
LINC00877-209ENST00000608654 UTRNP46939 3433 aa24.09■■□□□ 1.45
LINC00877-209ENST00000608654 AXIN2Q9Y2T1 843 aa24.08■■□□□ 1.45
LINC00877-209ENST00000608654 PTGER2P43116 358 aa24.07■■□□□ 1.44
LINC00877-209ENST00000608654 MARCH10Q8NA82 808 aaPredicted RBP24.07■■□□□ 1.44
LINC00877-209ENST00000608654 CABP2Q9NPB3 220 aa24.06■■□□□ 1.44
LINC00877-209ENST00000608654 WDR17Q8IZU2 1322 aa24.06■■□□□ 1.44
LINC00877-209ENST00000608654 CENPJQ9HC77 1338 aaPredicted RBP24.06■■□□□ 1.44
LINC00877-209ENST00000608654 DDB1Q16531 1140 aa24.05■■□□□ 1.44
LINC00877-209ENST00000608654 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
LINC00877-209ENST00000608654 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
LINC00877-209ENST00000608654 NLRP6P59044 892 aa24.03■■□□□ 1.44
LINC00877-209ENST00000608654 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
LINC00877-209ENST00000608654 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
LINC00877-209ENST00000608654 CHD4Q14839 1912 aa24.02■■□□□ 1.44
LINC00877-209ENST00000608654 NFAT5O94916 1531 aa24.02■■□□□ 1.44
LINC00877-209ENST00000608654 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
LINC00877-209ENST00000608654 ARHGEF25Q86VW2 580 aa24.02■■□□□ 1.44
LINC00877-209ENST00000608654 PAPPAQ13219 1627 aa24.02■■□□□ 1.44
LINC00877-209ENST00000608654 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
LINC00877-209ENST00000608654 NHSQ6T4R5 1651 aa23.99■■□□□ 1.43
LINC00877-209ENST00000608654 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
LINC00877-209ENST00000608654 CDCA7Q9BWT1 371 aaPredicted RBP23.99■■□□□ 1.43
LINC00877-209ENST00000608654 ABCC6O95255 1503 aa23.99■■□□□ 1.43
LINC00877-209ENST00000608654 USP54Q70EL1 1684 aa23.99■■□□□ 1.43
LINC00877-209ENST00000608654 CARD10Q9BWT7 1032 aa23.98■■□□□ 1.43
LINC00877-209ENST00000608654 TXNRD1Q16881 649 aa23.96■■□□□ 1.43
LINC00877-209ENST00000608654 ZBTB7AO95365 584 aa23.95■■□□□ 1.42
LINC00877-209ENST00000608654 COL24A1Q17RW2 1714 aa23.95■■□□□ 1.42
LINC00877-209ENST00000608654 TTC21BQ7Z4L5 1316 aa23.94■■□□□ 1.42
LINC00877-209ENST00000608654 MON2Q7Z3U7 1717 aa23.94■■□□□ 1.42
LINC00877-209ENST00000608654 SLC15A2Q16348 729 aa23.94■■□□□ 1.42
LINC00877-209ENST00000608654 TNS2Q63HR2 1409 aa23.93■■□□□ 1.42
LINC00877-209ENST00000608654 ZNF784Q8NCA9 323 aaPredicted RBP23.93■■□□□ 1.42
LINC00877-209ENST00000608654 ZBTB7CA1YPR0 619 aa23.92■■□□□ 1.42
LINC00877-209ENST00000608654 SYT17Q9BSW7 474 aa23.92■■□□□ 1.42
LINC00877-209ENST00000608654 BTAF1O14981 1849 aa23.91■■□□□ 1.42
LINC00877-209ENST00000608654 DCAF8L1A6NGE4 600 aa23.91■■□□□ 1.42
LINC00877-209ENST00000608654 ATF5Q9Y2D1 282 aaPredicted RBP23.9■■□□□ 1.42
LINC00877-209ENST00000608654 CCDC7Q96M83 1385 aa23.9■■□□□ 1.42
LINC00877-209ENST00000608654 KCNH5Q8NCM2 988 aa23.89■■□□□ 1.41
LINC00877-209ENST00000608654 FHDC1Q9C0D6 1143 aaPredicted RBP23.89■■□□□ 1.41
LINC00877-209ENST00000608654 QSER1Q2KHR3 1735 aa23.89■■□□□ 1.41
LINC00877-209ENST00000608654 MAP3K5Q99683 1374 aa23.89■■□□□ 1.41
LINC00877-209ENST00000608654 TTC21AQ8NDW8 1320 aa23.88■■□□□ 1.41
LINC00877-209ENST00000608654 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
LINC00877-209ENST00000608654 MTFR1LQ9H019 292 aa23.87■■□□□ 1.41
LINC00877-209ENST00000608654 STK32BQ9NY57 414 aa23.87■■□□□ 1.41
LINC00877-209ENST00000608654 EVC2Q86UK5 1308 aa23.86■■□□□ 1.41
LINC00877-209ENST00000608654 LTN1O94822 1766 aa23.86■■□□□ 1.41
LINC00877-209ENST00000608654 EXOC5O00471 708 aa23.86■■□□□ 1.41
LINC00877-209ENST00000608654 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
LINC00877-209ENST00000608654 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
LINC00877-209ENST00000608654 TUBGCP6Q96RT7 1819 aa23.82■■□□□ 1.4
LINC00877-209ENST00000608654 L3MBTL2Q969R5 705 aa23.82■■□□□ 1.4
LINC00877-209ENST00000608654 ERBB3P21860 1342 aa23.82■■□□□ 1.4
LINC00877-209ENST00000608654 KAT6BQ8WYB5 2073 aa23.8■■□□□ 1.4
LINC00877-209ENST00000608654 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
LINC00877-209ENST00000608654 CSB-PGBD3P0DP91 1061 aa23.78■■□□□ 1.4
LINC00877-209ENST00000608654 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
LINC00877-209ENST00000608654 KTN1Q86UP2 1357 aaKnown RBP23.78■■□□□ 1.4
LINC00877-209ENST00000608654 SBNO2Q9Y2G9 1366 aa23.78■■□□□ 1.4
LINC00877-209ENST00000608654 SOX12O15370 315 aa23.76■■□□□ 1.39
LINC00877-209ENST00000608654 ARXQ96QS3 562 aa23.76■■□□□ 1.39
LINC00877-209ENST00000608654 ACSBG1Q96GR2 724 aa23.75■■□□□ 1.39
LINC00877-209ENST00000608654 LY75O60449 1722 aa23.74■■□□□ 1.39
LINC00877-209ENST00000608654 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
LINC00877-209ENST00000608654 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
LINC00877-209ENST00000608654 SHANK3Q9BYB0 1731 aa23.73■■□□□ 1.39
LINC00877-209ENST00000608654 C1QTNF8P60827 252 aa23.73■■□□□ 1.39
LINC00877-209ENST00000608654 IL2RBP14784 551 aa23.72■■□□□ 1.39
LINC00877-209ENST00000608654 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
LINC00877-209ENST00000608654 NME9Q86XW9 330 aa23.69■■□□□ 1.38
LINC00877-209ENST00000608654 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
LINC00877-209ENST00000608654 SLC16A10Q8TF71 515 aa23.68■■□□□ 1.38
LINC00877-209ENST00000608654 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
LINC00877-209ENST00000608654 ANKRD24Q8TF21 1146 aa23.67■■□□□ 1.38
LINC00877-209ENST00000608654 NLRP2Q9NX02 1062 aa23.67■■□□□ 1.38
LINC00877-209ENST00000608654 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
LINC00877-209ENST00000608654 NSD2O96028 1365 aa23.66■■□□□ 1.38
LINC00877-209ENST00000608654 RGPD2P0DJD1 1756 aa23.66■■□□□ 1.38
LINC00877-209ENST00000608654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.65■■□□□ 1.38
LINC00877-209ENST00000608654 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
LINC00877-209ENST00000608654 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
LINC00877-209ENST00000608654 SLC27A3Q5K4L6 730 aa23.64■■□□□ 1.37
LINC00877-209ENST00000608654 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
LINC00877-209ENST00000608654 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
LINC00877-209ENST00000608654 IP6K1Q92551 441 aa23.6■■□□□ 1.37
LINC00877-209ENST00000608654 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
LINC00877-209ENST00000608654 A0A1W2PP64 1363 aa23.59■■□□□ 1.37
LINC00877-209ENST00000608654 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
LINC00877-209ENST00000608654 NLGN2Q8NFZ4 835 aa23.58■■□□□ 1.37
LINC00877-209ENST00000608654 GPR162Q16538 588 aa23.57■■□□□ 1.36
LINC00877-209ENST00000608654 KCNQ4P56696 695 aa23.56■■□□□ 1.36
LINC00877-209ENST00000608654 TAF1LQ8IZX4 1826 aa23.55■■□□□ 1.36
LINC00877-209ENST00000608654 PUS7Q96PZ0 661 aaKnown RBP23.55■■□□□ 1.36
LINC00877-209ENST00000608654 MEGF6O75095 1541 aa23.54■■□□□ 1.36
LINC00877-209ENST00000608654 YBX3P16989 372 aaKnown RBP eCLIP23.53■■□□□ 1.36
LINC00877-209ENST00000608654 PRIM1P49642 420 aaKnown RBP23.53■■□□□ 1.36
LINC00877-209ENST00000608654 DDX54Q8TDD1 881 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms