RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 CCDC146Q8IYE0 955 aa8.02□□□□□ -1.13
HDDC2-205ENST00000608456 CABP2Q9NPB3 220 aa8.02□□□□□ -1.13
HDDC2-205ENST00000608456 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 MED14O60244 1454 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 KIF24Q5T7B8 1368 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 CLTCL1P53675 1640 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 ATF7IPQ6VMQ6 1270 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 FTSJ3Q8IY81 847 aaKnown RBP8.01□□□□□ -1.13
HDDC2-205ENST00000608456 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
HDDC2-205ENST00000608456 C14orf93Q9H972 538 aaKnown RBP8.01□□□□□ -1.13
HDDC2-205ENST00000608456 SHPRHQ149N8 1683 aa8□□□□□ -1.13
HDDC2-205ENST00000608456 NUCB2P80303 420 aa8□□□□□ -1.13
HDDC2-205ENST00000608456 NUCB1Q02818 461 aa8□□□□□ -1.13
HDDC2-205ENST00000608456 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
HDDC2-205ENST00000608456 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
HDDC2-205ENST00000608456 ZBTB40Q9NUA8 1239 aa8□□□□□ -1.13
HDDC2-205ENST00000608456 PPIP5K1Q6PFW1 1433 aa8□□□□□ -1.13
HDDC2-205ENST00000608456 ANKRD36BQ8N2N9 1353 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 RLBP1P12271 317 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 ZNF445P59923 1031 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.99□□□□□ -1.13
HDDC2-205ENST00000608456 ASXL2Q76L83 1435 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 ZSCAN30Q86W11 494 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 NAP1L5Q96NT1 182 aaPredicted RBP7.99□□□□□ -1.13
HDDC2-205ENST00000608456 TMEM106CQ9BVX2 250 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 IFT172Q9UG01 1749 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 TRAPPC8Q9Y2L5 1435 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 KIF1BO60333 1816 aa7.99□□□□□ -1.13
HDDC2-205ENST00000608456 NOS1P29475 1434 aa7.98□□□□□ -1.13
HDDC2-205ENST00000608456 OFD1O75665 1012 aa7.98□□□□□ -1.13
HDDC2-205ENST00000608456 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
HDDC2-205ENST00000608456 EVC2Q86UK5 1308 aa7.98□□□□□ -1.13
HDDC2-205ENST00000608456 ZFYVE16Q7Z3T8 1539 aa7.98□□□□□ -1.13
HDDC2-205ENST00000608456 PIK3R4Q99570 1358 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 NSD3Q9BZ95 1437 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 K7ELQ4 463 aaPredicted RBP7.97□□□□□ -1.13
HDDC2-205ENST00000608456 ZNF500O60304 480 aaPredicted RBP7.97□□□□□ -1.13
HDDC2-205ENST00000608456 MTHFSP49914 203 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 CHD1LQ86WJ1 897 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 TNPO1Q92973 898 aaKnown RBP7.97□□□□□ -1.13
HDDC2-205ENST00000608456 PHF8Q9UPP1 1060 aa7.97□□□□□ -1.13
HDDC2-205ENST00000608456 PPRC1Q5VV67 1664 aaKnown RBP7.97□□□□□ -1.13
HDDC2-205ENST00000608456 ABCA6Q8N139 1617 aa7.96□□□□□ -1.13
HDDC2-205ENST00000608456 ZFYVE9O95405 1425 aa7.96□□□□□ -1.13
HDDC2-205ENST00000608456 HSP90AB1P08238 724 aaKnown RBP7.96□□□□□ -1.14
HDDC2-205ENST00000608456 TRIM27P14373 513 aa7.96□□□□□ -1.14
HDDC2-205ENST00000608456 RABEP1Q15276 862 aa7.96□□□□□ -1.14
HDDC2-205ENST00000608456 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
HDDC2-205ENST00000608456 PLEKHF1Q96S99 279 aa7.96□□□□□ -1.14
HDDC2-205ENST00000608456 INO80Q9ULG1 1556 aaPredicted RBP7.96□□□□□ -1.14
HDDC2-205ENST00000608456 PNPLA6Q8IY17 1366 aa7.96□□□□□ -1.14
HDDC2-205ENST00000608456 EFCAB6Q5THR3 1501 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 TTLL13PA6NNM8 815 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 HAX1O00165 279 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
HDDC2-205ENST00000608456 FCHSD2O94868 740 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 TMPOP42166 694 aaKnown RBP7.95□□□□□ -1.14
HDDC2-205ENST00000608456 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
HDDC2-205ENST00000608456 SMC4Q9NTJ3 1288 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 TRPC6Q9Y210 931 aa7.95□□□□□ -1.14
HDDC2-205ENST00000608456 ADGRB3O60242 1522 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 ATP7AQ04656 1500 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 ADGRB1O14514 1584 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 MSNP26038 577 aaKnown RBP7.94□□□□□ -1.14
HDDC2-205ENST00000608456 PDLIM2Q96JY6 352 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
HDDC2-205ENST00000608456 ADGRF5Q8IZF2 1346 aa7.94□□□□□ -1.14
HDDC2-205ENST00000608456 ZC3H13Q5T200 1668 aaKnown RBP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 U2AF1L5P0DN76 240 aaPredicted RBP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 MCM2P49736 904 aa7.93□□□□□ -1.14
HDDC2-205ENST00000608456 U2AF1Q01081 240 aaKnown RBP eCLIP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 SSH1Q8WYL5 1049 aa7.93□□□□□ -1.14
HDDC2-205ENST00000608456 PANK2Q9BZ23 570 aa7.93□□□□□ -1.14
HDDC2-205ENST00000608456 BMP2KQ9NSY1 1161 aaPredicted RBP7.93□□□□□ -1.14
HDDC2-205ENST00000608456 ATAD2Q6PL18 1390 aa7.93□□□□□ -1.14
HDDC2-205ENST00000608456 CDC42BPGQ6DT37 1551 aa7.93□□□□□ -1.14
HDDC2-205ENST00000608456 ZBTB7BO15156 539 aaPredicted RBP7.92□□□□□ -1.14
HDDC2-205ENST00000608456 GALR2O43603 387 aaPredicted RBP7.92□□□□□ -1.14
HDDC2-205ENST00000608456 CDC45O75419 566 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
HDDC2-205ENST00000608456 EXOSC9Q06265 439 aaKnown RBP7.92□□□□□ -1.14
HDDC2-205ENST00000608456 ITPRIPQ8IWB1 547 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 MS4A4AQ96JQ5 239 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 KIF2CQ99661 725 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 API5Q9BZZ5 524 aaKnown RBP7.92□□□□□ -1.14
HDDC2-205ENST00000608456 ZMYND15Q9H091 742 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 SLC12A5Q9H2X9 1139 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 TRIM35Q9UPQ4 493 aa7.92□□□□□ -1.14
HDDC2-205ENST00000608456 DYNC1I1O14576 645 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 PPP1R37O75864 691 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 BAG4O95429 457 aaKnown RBP7.91□□□□□ -1.14
HDDC2-205ENST00000608456 MBD3O95983 291 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 LMOD3Q0VAK6 560 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 CADPS2Q86UW7 1296 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 GZF1Q9H116 711 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms