RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 LRRC37A3O60309 1634 aa21.18■□□□□ 0.98
CTSA-216ENST00000607212 PPP1R1BQ9UD71 204 aaPredicted RBP21.17■□□□□ 0.98
CTSA-216ENST00000607212 WDR17Q8IZU2 1322 aa21.17■□□□□ 0.98
CTSA-216ENST00000607212 KTN1Q86UP2 1357 aaKnown RBP21.17■□□□□ 0.98
CTSA-216ENST00000607212 CPSF1Q10570 1443 aaKnown RBP21.17■□□□□ 0.98
CTSA-216ENST00000607212 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
CTSA-216ENST00000607212 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
CTSA-216ENST00000607212 COL18A1P39060 1754 aa21.15■□□□□ 0.98
CTSA-216ENST00000607212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
CTSA-216ENST00000607212 AXIN2Q9Y2T1 843 aa21.15■□□□□ 0.98
CTSA-216ENST00000607212 SBF2Q86WG5 1849 aa21.14■□□□□ 0.97
CTSA-216ENST00000607212 TMC1Q8TDI8 760 aa21.14■□□□□ 0.97
CTSA-216ENST00000607212 ARHGEF25Q86VW2 580 aa21.13■□□□□ 0.97
CTSA-216ENST00000607212 CDCA7Q9BWT1 371 aaPredicted RBP21.13■□□□□ 0.97
CTSA-216ENST00000607212 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
CTSA-216ENST00000607212 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
CTSA-216ENST00000607212 CARD10Q9BWT7 1032 aa21.1■□□□□ 0.97
CTSA-216ENST00000607212 BCL11BQ9C0K0 894 aaPredicted RBP21.1■□□□□ 0.97
CTSA-216ENST00000607212 SPON1Q9HCB6 807 aa21.1■□□□□ 0.97
CTSA-216ENST00000607212 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
CTSA-216ENST00000607212 EXOC5O00471 708 aa21.09■□□□□ 0.97
CTSA-216ENST00000607212 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
CTSA-216ENST00000607212 MARCH10Q8NA82 808 aaPredicted RBP21.08■□□□□ 0.97
CTSA-216ENST00000607212 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
CTSA-216ENST00000607212 KCNQ2O43526 872 aa21.07■□□□□ 0.96
CTSA-216ENST00000607212 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
CTSA-216ENST00000607212 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
CTSA-216ENST00000607212 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
CTSA-216ENST00000607212 CCDC7Q96M83 1385 aa21.07■□□□□ 0.96
CTSA-216ENST00000607212 NFAT5O94916 1531 aa21.06■□□□□ 0.96
CTSA-216ENST00000607212 PLSCR1O15162 318 aa21.06■□□□□ 0.96
CTSA-216ENST00000607212 PTF1AQ7RTS3 328 aa21.06■□□□□ 0.96
CTSA-216ENST00000607212 NLRP2Q9NX02 1062 aa21.06■□□□□ 0.96
CTSA-216ENST00000607212 NME9Q86XW9 330 aa21.05■□□□□ 0.96
CTSA-216ENST00000607212 LTN1O94822 1766 aa21.05■□□□□ 0.96
CTSA-216ENST00000607212 KAT6BQ8WYB5 2073 aa21.05■□□□□ 0.96
CTSA-216ENST00000607212 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.96
CTSA-216ENST00000607212 STK32BQ9NY57 414 aa21.02■□□□□ 0.96
CTSA-216ENST00000607212 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
CTSA-216ENST00000607212 ABCC6O95255 1503 aa21.01■□□□□ 0.95
CTSA-216ENST00000607212 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
CTSA-216ENST00000607212 TERF2IPQ9NYB0 399 aa21.01■□□□□ 0.95
CTSA-216ENST00000607212 ACSBG1Q96GR2 724 aa21■□□□□ 0.95
CTSA-216ENST00000607212 TNS2Q63HR2 1409 aa21■□□□□ 0.95
CTSA-216ENST00000607212 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
CTSA-216ENST00000607212 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
CTSA-216ENST00000607212 ZBTB7AO95365 584 aa20.98■□□□□ 0.95
CTSA-216ENST00000607212 IL2RBP14784 551 aa20.98■□□□□ 0.95
CTSA-216ENST00000607212 YY1P25490 414 aa20.98■□□□□ 0.95
CTSA-216ENST00000607212 TXNRD1Q16881 649 aa20.98■□□□□ 0.95
CTSA-216ENST00000607212 ERBB3P21860 1342 aa20.98■□□□□ 0.95
CTSA-216ENST00000607212 BCL9O00512 1426 aa20.97■□□□□ 0.95
CTSA-216ENST00000607212 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
CTSA-216ENST00000607212 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
CTSA-216ENST00000607212 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
CTSA-216ENST00000607212 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
CTSA-216ENST00000607212 NINLQ9Y2I6 1382 aa20.96■□□□□ 0.95
CTSA-216ENST00000607212 CASZ1Q86V15 1759 aa20.95■□□□□ 0.94
CTSA-216ENST00000607212 PROM2Q8N271 834 aa20.95■□□□□ 0.94
CTSA-216ENST00000607212 ATF5Q9Y2D1 282 aaPredicted RBP20.95■□□□□ 0.94
CTSA-216ENST00000607212 A0A1W2PP64 1363 aa20.95■□□□□ 0.94
CTSA-216ENST00000607212 NHSQ6T4R5 1651 aa20.94■□□□□ 0.94
CTSA-216ENST00000607212 PDGFDQ9GZP0 370 aaPredicted RBP20.93■□□□□ 0.94
CTSA-216ENST00000607212 SLC15A2Q16348 729 aa20.92■□□□□ 0.94
CTSA-216ENST00000607212 COG3Q96JB2 828 aa20.91■□□□□ 0.94
CTSA-216ENST00000607212 DDX54Q8TDD1 881 aaKnown RBP20.9■□□□□ 0.94
CTSA-216ENST00000607212 BTAF1O14981 1849 aa20.9■□□□□ 0.94
CTSA-216ENST00000607212 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.93
CTSA-216ENST00000607212 AMPHP49418 695 aa20.89■□□□□ 0.93
CTSA-216ENST00000607212 MYOM1P52179 1685 aa20.89■□□□□ 0.93
CTSA-216ENST00000607212 FAM208AQ9UK61 1670 aaKnown RBP20.87■□□□□ 0.93
CTSA-216ENST00000607212 IP6K1Q92551 441 aa20.87■□□□□ 0.93
CTSA-216ENST00000607212 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
CTSA-216ENST00000607212 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
CTSA-216ENST00000607212 SLC24A1O60721 1099 aa20.85■□□□□ 0.93
CTSA-216ENST00000607212 MTFR1LQ9H019 292 aa20.85■□□□□ 0.93
CTSA-216ENST00000607212 PTGER2P43116 358 aa20.83■□□□□ 0.93
CTSA-216ENST00000607212 MAP3K19Q56UN5 1328 aa20.82■□□□□ 0.92
CTSA-216ENST00000607212 FBLN1P23142 703 aa20.82■□□□□ 0.92
CTSA-216ENST00000607212 TESK2Q96S53 571 aa20.82■□□□□ 0.92
CTSA-216ENST00000607212 FHDC1Q9C0D6 1143 aaPredicted RBP20.82■□□□□ 0.92
CTSA-216ENST00000607212 HOXC9P31274 260 aa20.81■□□□□ 0.92
CTSA-216ENST00000607212 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
CTSA-216ENST00000607212 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
CTSA-216ENST00000607212 TMF1P82094 1093 aa20.8■□□□□ 0.92
CTSA-216ENST00000607212 ANKRD36BQ8N2N9 1353 aa20.79■□□□□ 0.92
CTSA-216ENST00000607212 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
CTSA-216ENST00000607212 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
CTSA-216ENST00000607212 ZNF827Q17R98 1081 aa20.78■□□□□ 0.92
CTSA-216ENST00000607212 ARXQ96QS3 562 aa20.78■□□□□ 0.92
CTSA-216ENST00000607212 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
CTSA-216ENST00000607212 PAPPAQ13219 1627 aa20.78■□□□□ 0.92
CTSA-216ENST00000607212 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
CTSA-216ENST00000607212 ZCRB1Q8TBF4 217 aaKnown RBP20.77■□□□□ 0.92
CTSA-216ENST00000607212 GGNBP2Q9H3C7 697 aa20.77■□□□□ 0.92
CTSA-216ENST00000607212 SMG6Q86US8 1419 aaKnown RBP20.77■□□□□ 0.91
CTSA-216ENST00000607212 USP47Q96K76 1375 aa20.76■□□□□ 0.91
CTSA-216ENST00000607212 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
CTSA-216ENST00000607212 LRRC4BQ9NT99 713 aa20.76■□□□□ 0.91
CTSA-216ENST00000607212 USHBP1Q8N6Y0 703 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms