RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
LINC00240-203ENST00000606878 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
LINC00240-203ENST00000606878 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
LINC00240-203ENST00000606878 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
LINC00240-203ENST00000606878 WDR17Q8IZU2 1322 aa22.88■■□□□ 1.25
LINC00240-203ENST00000606878 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
LINC00240-203ENST00000606878 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
LINC00240-203ENST00000606878 OVOS2A0A0J9YW53 1432 aa22.87■■□□□ 1.25
LINC00240-203ENST00000606878 OVOS2Q6IE36 1432 aa22.87■■□□□ 1.25
LINC00240-203ENST00000606878 CRB1P82279 1406 aa22.86■■□□□ 1.25
LINC00240-203ENST00000606878 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
LINC00240-203ENST00000606878 NFAT5O94916 1531 aa22.86■■□□□ 1.25
LINC00240-203ENST00000606878 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
LINC00240-203ENST00000606878 IP6K1Q92551 441 aa22.85■■□□□ 1.25
LINC00240-203ENST00000606878 CARD10Q9BWT7 1032 aa22.85■■□□□ 1.25
LINC00240-203ENST00000606878 AMPHP49418 695 aa22.84■■□□□ 1.25
LINC00240-203ENST00000606878 PANK3Q9H999 370 aa22.84■■□□□ 1.25
LINC00240-203ENST00000606878 FBLN1P23142 703 aa22.83■■□□□ 1.25
LINC00240-203ENST00000606878 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
LINC00240-203ENST00000606878 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
LINC00240-203ENST00000606878 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
LINC00240-203ENST00000606878 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
LINC00240-203ENST00000606878 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
LINC00240-203ENST00000606878 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
LINC00240-203ENST00000606878 COL18A1P39060 1754 aa22.81■■□□□ 1.24
LINC00240-203ENST00000606878 MAP3K19Q56UN5 1328 aa22.81■■□□□ 1.24
LINC00240-203ENST00000606878 FAM182BQ5T319 152 aa22.8■■□□□ 1.24
LINC00240-203ENST00000606878 USP54Q70EL1 1684 aa22.79■■□□□ 1.24
LINC00240-203ENST00000606878 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
LINC00240-203ENST00000606878 ERBB3P21860 1342 aa22.79■■□□□ 1.24
LINC00240-203ENST00000606878 HOXC9P31274 260 aa22.78■■□□□ 1.24
LINC00240-203ENST00000606878 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
LINC00240-203ENST00000606878 LTV1Q96GA3 475 aaPredicted RBP22.78■■□□□ 1.24
LINC00240-203ENST00000606878 DDB1Q16531 1140 aa22.77■■□□□ 1.24
LINC00240-203ENST00000606878 ABCC6O95255 1503 aa22.77■■□□□ 1.24
LINC00240-203ENST00000606878 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
LINC00240-203ENST00000606878 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
LINC00240-203ENST00000606878 BRWD3Q6RI45 1802 aa22.76■■□□□ 1.23
LINC00240-203ENST00000606878 KIF7Q2M1P5 1343 aa22.76■■□□□ 1.23
LINC00240-203ENST00000606878 EXOC5O00471 708 aa22.74■■□□□ 1.23
LINC00240-203ENST00000606878 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
LINC00240-203ENST00000606878 THSD7AQ9UPZ6 1657 aa22.73■■□□□ 1.23
LINC00240-203ENST00000606878 MYOM1P52179 1685 aa22.72■■□□□ 1.23
LINC00240-203ENST00000606878 PPM1GO15355 546 aaPredicted RBP22.7■■□□□ 1.22
LINC00240-203ENST00000606878 IL2RBP14784 551 aa22.7■■□□□ 1.22
LINC00240-203ENST00000606878 RGPD5Q99666 1765 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 RTL1A6NKG5 1358 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 TRIM37O94972 964 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 BAG6P46379 1132 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 HSP90AB2PQ58FF8 381 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 DEFB132Q7Z7B7 95 aa22.69■■□□□ 1.22
LINC00240-203ENST00000606878 KIF24Q5T7B8 1368 aa22.68■■□□□ 1.22
LINC00240-203ENST00000606878 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
LINC00240-203ENST00000606878 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
LINC00240-203ENST00000606878 EMILIN1Q9Y6C2 1016 aa22.67■■□□□ 1.22
LINC00240-203ENST00000606878 LTN1O94822 1766 aa22.67■■□□□ 1.22
LINC00240-203ENST00000606878 MARCH10Q8NA82 808 aaPredicted RBP22.66■■□□□ 1.22
LINC00240-203ENST00000606878 INSRP06213 1382 aa22.65■■□□□ 1.22
LINC00240-203ENST00000606878 FLT4P35916 1363 aa22.65■■□□□ 1.22
LINC00240-203ENST00000606878 EP400Q96L91 3159 aa22.65■■□□□ 1.22
LINC00240-203ENST00000606878 POLKQ9UBT6 870 aa22.65■■□□□ 1.22
LINC00240-203ENST00000606878 NSD2O96028 1365 aa22.64■■□□□ 1.22
LINC00240-203ENST00000606878 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
LINC00240-203ENST00000606878 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
LINC00240-203ENST00000606878 DISP2A7MBM2 1401 aa22.64■■□□□ 1.21
LINC00240-203ENST00000606878 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
LINC00240-203ENST00000606878 APBA3O96018 575 aa22.63■■□□□ 1.21
LINC00240-203ENST00000606878 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
LINC00240-203ENST00000606878 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
LINC00240-203ENST00000606878 SMG6Q86US8 1419 aaKnown RBP22.62■■□□□ 1.21
LINC00240-203ENST00000606878 PER1O15534 1290 aaPredicted RBP22.61■■□□□ 1.21
LINC00240-203ENST00000606878 AMER1Q5JTC6 1135 aaPredicted RBP22.61■■□□□ 1.21
LINC00240-203ENST00000606878 PARP4Q9UKK3 1724 aaKnown RBP22.6■■□□□ 1.21
LINC00240-203ENST00000606878 OVOS2A0A0G2JMS6 1433 aa22.6■■□□□ 1.21
LINC00240-203ENST00000606878 RAPGEF4Q8WZA2 1011 aa22.58■■□□□ 1.21
LINC00240-203ENST00000606878 BCL11BQ9C0K0 894 aaPredicted RBP22.58■■□□□ 1.21
LINC00240-203ENST00000606878 USHBP1Q8N6Y0 703 aa22.57■■□□□ 1.2
LINC00240-203ENST00000606878 ZCRB1Q8TBF4 217 aaKnown RBP22.57■■□□□ 1.2
LINC00240-203ENST00000606878 DDX54Q8TDD1 881 aaKnown RBP22.57■■□□□ 1.2
LINC00240-203ENST00000606878 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
LINC00240-203ENST00000606878 CAMKK2Q96RR4 588 aa22.55■■□□□ 1.2
LINC00240-203ENST00000606878 BCL9O00512 1426 aa22.55■■□□□ 1.2
LINC00240-203ENST00000606878 EZH2Q15910 746 aaKnown RBP22.54■■□□□ 1.2
LINC00240-203ENST00000606878 CC2D1BQ5T0F9 858 aaKnown RBP22.54■■□□□ 1.2
LINC00240-203ENST00000606878 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
LINC00240-203ENST00000606878 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
LINC00240-203ENST00000606878 EYA1Q99502 592 aa22.52■■□□□ 1.2
LINC00240-203ENST00000606878 EIF4A2Q14240 407 aaKnown RBP22.51■■□□□ 1.19
LINC00240-203ENST00000606878 PLSCR1O15162 318 aa22.5■■□□□ 1.19
LINC00240-203ENST00000606878 PTF1AQ7RTS3 328 aa22.5■■□□□ 1.19
LINC00240-203ENST00000606878 ACSBG1Q96GR2 724 aa22.5■■□□□ 1.19
LINC00240-203ENST00000606878 PEAK1Q9H792 1746 aa22.5■■□□□ 1.19
LINC00240-203ENST00000606878 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
LINC00240-203ENST00000606878 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
LINC00240-203ENST00000606878 RGPD1P0DJD0 1748 aa22.49■■□□□ 1.19
LINC00240-203ENST00000606878 KCNQ2O43526 872 aa22.49■■□□□ 1.19
LINC00240-203ENST00000606878 CNGB1Q14028 1251 aaPredicted RBP22.49■■□□□ 1.19
LINC00240-203ENST00000606878 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
LINC00240-203ENST00000606878 NPC1L1Q9UHC9 1359 aa22.48■■□□□ 1.19
LINC00240-203ENST00000606878 WNK3Q9BYP7 1800 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms